Gene annotation
Transcriptome id Sobic.007G226800.1
Synonym DIT2.1 ;DIT2, DCT, DIT2.1, DCT, Sb07g029170
Functional annotation - (PubMedID : 26976818)
dicarboxylate transporter 5 (PubMedID : 27016024)
citrate transporter, putative, expressed
UniProt C5YJR5
Pfam PF03600
Panther DB PTHR10283 PTHR10283:SF106
NCBI CDD -
KEGG Orthology K03319; divalent anion:Na+ symporter, DASS family
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT5G64290 : dicarboxylate transport 2.1
RAP-DB (Rice) LOC_Os08g37600.1 : citrate transporter, putative, expressed
MaizeGDB (Corn) Zm00025a004917 , Zm00025a014127
Brachypodium KQJ98711 , KQJ90598
Barley HORVU5Hr1G070230.2 , HORVU5Hr1G070230.1 , HORVU7Hr1G063220.2 , HORVU7Hr1G063220.3 , HORVU7Hr1G063220.1
Wheat TraesCS7D02G283000 , TraesCS7A02G285000 , TraesCS5B02G246600 , TraesCS5D02G256100 , TraesCS7B02G199700 , TraesCS5A02G248900
Populus -


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cDNA sequences
Sobic.007G226800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G203600 PPR repeat domain containing protein, putative, expressed -
2 Sobic.010G086300 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ
3 Sobic.008G072500 SAM-dependent methyltransferase, putative, expressed K18162: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 5
4 Sobic.009G025700 cycloeucalenol cycloisomerase, putative, expressed K08246: cycloeucalenol cycloisomerase
5 Sobic.004G025700 PPR repeat domain containing protein, putative, expressed -
6 Sobic.003G049200 NADH-cytochrome b5 reductase, putative, expressed K00326: cytochrome-b5 reductase
7 Sobic.001G011000 elongation factor Tu, putative, expressed K02358: tuf, elongation factor Tu
8 Sobic.010G133400 pantothenate kinase 4, putative, expressed -
9 Sobic.001G378800 fumarate hydratase, mitochondrial precursor, putative, expressed K01679: E4.2.1.2B, fumC, fumarate hydratase, class II
10 Sobic.003G048600 OsGrx_S15.1 - glutaredoxin subgroup II, expressed -
11 Sobic.009G041800 PPR repeat domain containing protein, putative, expressed -
12 Sobic.003G394500 GPI transamidase component PIG-S-related, putative, expressed K05291: GPI-anchor transamidase subunit S
13 Sobic.006G232800 expressed protein K17785: IMMT, FCJ1, mitofilin
14 Sobic.002G193500 malonyl-CoA decarboxylase, mitochondrial precursor, putative, expressed K01578: malonyl-CoA decarboxylase
15 Sobic.006G106300 - K17675: SUPV3L1, ATP-dependent RNA helicase SUPV3L1/SUV3
16 Sobic.010G147500 tryptophan biosynthesis protein trpCF, putative, expressed K01817: phosphoribosylanthranilate isomerase
17 Sobic.008G095900 ATP binding protein, putative, expressed K17592: sacsin
18 Sobic.009G063800 ATP10 protein, expressed K18192: mitochondrial ATPase complex subunit ATP10
19 Sobic.001G385000 nucleoside-triphosphatase, putative, expressed K14641: apyrase
20 Sobic.003G260600 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta


Gene co-expression network
sample Sobic007G226800 Sobic007G226800 Sobic001G203600 Sobic001G203600 Sobic007G226800--Sobic001G203600 Sobic010G086300 Sobic010G086300 Sobic007G226800--Sobic010G086300 Sobic008G072500 Sobic008G072500 Sobic007G226800--Sobic008G072500 Sobic009G025700 Sobic009G025700 Sobic007G226800--Sobic009G025700 Sobic004G025700 Sobic004G025700 Sobic007G226800--Sobic004G025700 Sobic003G049200 Sobic003G049200 Sobic007G226800--Sobic003G049200 Sobic001G011000 Sobic001G011000 Sobic007G226800--Sobic001G011000 Sobic010G133400 Sobic010G133400 Sobic007G226800--Sobic010G133400 Sobic001G378800 Sobic001G378800 Sobic007G226800--Sobic001G378800 Sobic001G203600--Sobic010G086300 Sobic001G117900 Sobic001G117900 Sobic001G203600--Sobic001G117900 Sobic007G204000 Sobic007G204000 Sobic001G203600--Sobic007G204000 Sobic001G052100 Sobic001G052100 Sobic001G203600--Sobic001G052100 Sobic001G203600--Sobic008G072500 Sobic001G203600--Sobic007G226800 Sobic002G182000 Sobic002G182000 Sobic001G203600--Sobic002G182000 Sobic006G220400 Sobic006G220400 Sobic001G203600--Sobic006G220400 Sobic009G063800 Sobic009G063800 Sobic001G203600--Sobic009G063800 Sobic001G385000 Sobic001G385000 Sobic010G086300--Sobic001G385000 Sobic006G232800 Sobic006G232800 Sobic010G086300--Sobic006G232800 Sobic003G394500 Sobic003G394500 Sobic010G086300--Sobic003G394500 Sobic001G149000 Sobic001G149000 Sobic010G086300--Sobic001G149000 Sobic008G022400 Sobic008G022400 Sobic010G086300--Sobic008G022400 Sobic010G086300--Sobic009G025700 Sobic002G362500 Sobic002G362500 Sobic010G086300--Sobic002G362500 Sobic006G191000 Sobic006G191000 Sobic010G086300--Sobic006G191000 Sobic009G046900 Sobic009G046900 Sobic010G086300--Sobic009G046900 Sobic008G072500--Sobic003G049200 Sobic003G260600 Sobic003G260600 Sobic008G072500--Sobic003G260600 Sobic008G072500--Sobic010G133400 Sobic008G072500--Sobic001G378800 Sobic002G193500 Sobic002G193500 Sobic008G072500--Sobic002G193500 Sobic008G072500--Sobic006G232800 Sobic003G048600 Sobic003G048600 Sobic008G072500--Sobic003G048600 Sobic007G118500 Sobic007G118500 Sobic008G072500--Sobic007G118500 Sobic008G072500--Sobic010G086300 Sobic009G220700 Sobic009G220700 Sobic009G025700--Sobic009G220700 Sobic002G201700 Sobic002G201700 Sobic009G025700--Sobic002G201700 Sobic002G167100 Sobic002G167100 Sobic009G025700--Sobic002G167100 Sobic009G025700--Sobic002G362500 Sobic006G050100 Sobic006G050100 Sobic009G025700--Sobic006G050100 Sobic009G163100 Sobic009G163100 Sobic009G025700--Sobic009G163100 Sobic004G026600 Sobic004G026600 Sobic009G025700--Sobic004G026600 Sobic002G309100 Sobic002G309100 Sobic009G025700--Sobic002G309100 Sobic008G156600 Sobic008G156600 Sobic009G025700--Sobic008G156600 Sobic004G025700--Sobic003G394500 Sobic008G095900 Sobic008G095900 Sobic004G025700--Sobic008G095900 Sobic004G025700--Sobic006G191000 Sobic004G025700--Sobic010G086300 Sobic004G025700--Sobic007G226800 Sobic001G486900 Sobic001G486900 Sobic004G025700--Sobic001G486900 Sobic010G112600 Sobic010G112600 Sobic004G025700--Sobic010G112600 Sobic002G400151 Sobic002G400151 Sobic004G025700--Sobic002G400151 Sobic004G194400 Sobic004G194400 Sobic004G025700--Sobic004G194400 Sobic003G049200--Sobic008G072500 Sobic003G049200--Sobic010G133400 Sobic003G049200--Sobic001G378800 Sobic003G049200--Sobic003G260600 Sobic002G255400 Sobic002G255400 Sobic003G049200--Sobic002G255400 Sobic007G111300 Sobic007G111300 Sobic003G049200--Sobic007G111300 Sobic001G457000 Sobic001G457000 Sobic003G049200--Sobic001G457000 Sobic003G049200--Sobic006G232800 Sobic003G049200--Sobic007G118500 Sobic004G212100 Sobic004G212100 Sobic001G011000--Sobic004G212100 Sobic002G367800 Sobic002G367800 Sobic001G011000--Sobic002G367800 Sobic002G071100 Sobic002G071100 Sobic001G011000--Sobic002G071100 Sobic004G356300 Sobic004G356300 Sobic001G011000--Sobic004G356300 Sobic002G070300 Sobic002G070300 Sobic001G011000--Sobic002G070300 Sobic009G041800 Sobic009G041800 Sobic001G011000--Sobic009G041800 Sobic002G281600 Sobic002G281600 Sobic001G011000--Sobic002G281600 Sobic002G153000 Sobic002G153000 Sobic001G011000--Sobic002G153000 Sobic008G057900 Sobic008G057900 Sobic001G011000--Sobic008G057900 Sobic010G133400--Sobic003G049200 Sobic010G133400--Sobic007G118500 Sobic010G133400--Sobic001G378800 Sobic010G133400--Sobic008G072500 Sobic004G263500 Sobic004G263500 Sobic010G133400--Sobic004G263500 Sobic001G356100 Sobic001G356100 Sobic010G133400--Sobic001G356100 Sobic010G133400--Sobic003G394500 Sobic008G171400 Sobic008G171400 Sobic010G133400--Sobic008G171400 Sobic010G133400--Sobic002G193500 Sobic001G378800--Sobic006G232800 Sobic001G378800--Sobic003G394500 Sobic001G047600 Sobic001G047600 Sobic001G378800--Sobic001G047600 Sobic004G077300 Sobic004G077300 Sobic001G378800--Sobic004G077300 Sobic001G356200 Sobic001G356200 Sobic001G378800--Sobic001G356200 Sobic003G372200 Sobic003G372200 Sobic001G378800--Sobic003G372200 Sobic001G424800 Sobic001G424800 Sobic001G378800--Sobic001G424800 Sobic001G378800--Sobic003G260600 Sobic004G350700 Sobic004G350700 Sobic001G378800--Sobic004G350700
Octagon: transcription factors


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