Gene annotation
Transcriptome id Sobic.009G167800.1
Synonym Sb09g022950
Functional annotation protein kinase family protein, putative, expressed
UniProt A0A1Z5R332
Pfam PF07714
Panther DB PTHR24058 PTHR24058:SF63
NCBI CDD KOG0671; LAMMER dual specificity kinases
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G40120 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os05g39080.1 : protein kinase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a037756 , Zm00025a043931
Brachypodium KQK05825 , KQK05826
Barley HORVU3Hr1G087550.10 , HORVU3Hr1G087550.11 , HORVU3Hr1G087550.13 , HORVU1Hr1G071160.1 , HORVU3Hr1G087550.8 , HORVU3Hr1G087550.9 , HORVU3Hr1G087550.7 , HORVU3Hr1G087550.4 , HORVU3Hr1G087550.5 , HORVU3Hr1G087550.2 , HORVU3Hr1G087550.3 , HORVU3Hr1G087550.1 , HORVU3Hr1G087550.14 , HORVU1Hr1G071160.4 , HORVU1Hr1G071160.5 , HORVU1Hr1G071160.2 , HORVU1Hr1G071160.3 , HORVU3Hr1G087550.12 , HORVU3Hr1G087550.6
Wheat TraesCS1D02G290600 , TraesCS1D02G290600 , TraesCS1B02G301500 , TraesCS1B02G301500 , TraesCS1A02G292100 , TraesCS1A02G292100
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G191500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@N-acetylglucosaminyltransferase, putative, expressed -
2 Sobic.010G054100 SHR5-receptor-like kinase, putative, expressed -
3 Sobic.001G159800 KIP1, putative, expressed -
4 Sobic.010G216000 villin protein, putative, expressed K05768: gelsolin
5 Sobic.007G114500 NAD dependent epimerase/dehydratase family protein, putative, expressed K01784: galE, UDP-glucose 4-epimerase
6 Sobic.003G017500 TTL1, putative, expressed -
7 Sobic.004G270800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WD repeat-containing protein, putative, expressed K03363: cell division cycle 20, cofactor of APC complex
8 Sobic.004G249100 spotted leaf 11, putative, expressed -
9 Sobic.009G063400 "CESA1-like or CESA10-like homologous to the Arabidopsis, up-regulated in addition of GA3"(PubMedID : 26198258)@CESA1 - cellulose synthase, expressed K10999: cellulose synthase A
10 Sobic.002G275500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
11 Sobic.009G073400 galactosyltransferase family protein, putative, expressed -
12 Sobic.001G183600 galactosyltransferase, putative, expressed -
13 Sobic.009G206500 respiratory burst oxidase, putative, expressed K13447: respiratory burst oxidase
14 Sobic.003G237800 hydrolase, alpha/beta fold family domain containing protein, expressed -
15 Sobic.003G410600 exostosin family domain containing protein, expressed -
16 Sobic.002G075500 CESA8 - cellulose synthase, expressed K10999: cellulose synthase A
17 Sobic.004G051300 galactosyltransferase, putative, expressed -
18 Sobic.001G228200 T-complex protein, putative, expressed K04077: groEL, chaperonin GroEL
19 Sobic.004G325000 expressed protein -
20 Sobic.002G214200 ferric reductase, putative, expressed K13447: respiratory burst oxidase


Gene co-expression network
sample Sobic009G167800 Sobic009G167800 Sobic008G191500 Sobic008G191500 Sobic009G167800--Sobic008G191500 Sobic010G054100 Sobic010G054100 Sobic009G167800--Sobic010G054100 Sobic001G159800 Sobic001G159800 Sobic009G167800--Sobic001G159800 Sobic010G216000 Sobic010G216000 Sobic009G167800--Sobic010G216000 Sobic007G114500 Sobic007G114500 Sobic009G167800--Sobic007G114500 Sobic003G017500 Sobic003G017500 Sobic009G167800--Sobic003G017500 Sobic004G270800 Sobic004G270800 Sobic009G167800--Sobic004G270800 Sobic004G249100 Sobic004G249100 Sobic009G167800--Sobic004G249100 Sobic009G063400 Sobic009G063400 Sobic009G167800--Sobic009G063400 Sobic010G090500 Sobic010G090500 Sobic008G191500--Sobic010G090500 Sobic008G191500--Sobic001G159800 Sobic009G206500 Sobic009G206500 Sobic008G191500--Sobic009G206500 Sobic008G191500--Sobic003G017500 Sobic009G151700 Sobic009G151700 Sobic008G191500--Sobic009G151700 Sobic004G051300 Sobic004G051300 Sobic008G191500--Sobic004G051300 Sobic001G073150 Sobic001G073150 Sobic008G191500--Sobic001G073150 Sobic009G073400 Sobic009G073400 Sobic008G191500--Sobic009G073400 Sobic009G061000 Sobic009G061000 Sobic008G191500--Sobic009G061000 Sobic010G054100--Sobic004G270800 Sobic010G067800 Sobic010G067800 Sobic010G054100--Sobic010G067800 Sobic006G172200 Sobic006G172200 Sobic010G054100--Sobic006G172200 Sobic010G054100--Sobic009G073400 Sobic010G054100--Sobic003G017500 Sobic007G139500 Sobic007G139500 Sobic010G054100--Sobic007G139500 Sobic002G383100 Sobic002G383100 Sobic010G054100--Sobic002G383100 Sobic010G054100--Sobic001G159800 Sobic008G127550 Sobic008G127550 Sobic010G054100--Sobic008G127550 Sobic001G159800--Sobic010G090500 Sobic001G437500 Sobic001G437500 Sobic001G159800--Sobic001G437500 Sobic001G159800--Sobic009G061000 Sobic001G159800--Sobic009G206500 Sobic001G159800--Sobic009G073400 Sobic001G159800--Sobic003G017500 Sobic001G196000 Sobic001G196000 Sobic001G159800--Sobic001G196000 Sobic006G173200 Sobic006G173200 Sobic001G159800--Sobic006G173200 Sobic001G507200 Sobic001G507200 Sobic001G159800--Sobic001G507200 Sobic004G034300 Sobic004G034300 Sobic010G216000--Sobic004G034300 Sobic010G178600 Sobic010G178600 Sobic010G216000--Sobic010G178600 Sobic002G408800 Sobic002G408800 Sobic010G216000--Sobic002G408800 Sobic003G346400 Sobic003G346400 Sobic010G216000--Sobic003G346400 Sobic001G161700 Sobic001G161700 Sobic010G216000--Sobic001G161700 Sobic001G012900 Sobic001G012900 Sobic010G216000--Sobic001G012900 Sobic002G070600 Sobic002G070600 Sobic010G216000--Sobic002G070600 Sobic003G348800 Sobic003G348800 Sobic010G216000--Sobic003G348800 Sobic002G029300 Sobic002G029300 Sobic010G216000--Sobic002G029300 Sobic003G394100 Sobic003G394100 Sobic007G114500--Sobic003G394100 Sobic009G251100 Sobic009G251100 Sobic007G114500--Sobic009G251100 Sobic008G039800 Sobic008G039800 Sobic007G114500--Sobic008G039800 Sobic007G114500--Sobic009G167800 Sobic002G313600 Sobic002G313600 Sobic007G114500--Sobic002G313600 Sobic007G114500--Sobic003G017500 Sobic010G217100 Sobic010G217100 Sobic007G114500--Sobic010G217100 Sobic001G512000 Sobic001G512000 Sobic007G114500--Sobic001G512000 Sobic002G161700 Sobic002G161700 Sobic007G114500--Sobic002G161700 Sobic003G017500--Sobic002G383100 Sobic001G051300 Sobic001G051300 Sobic003G017500--Sobic001G051300 Sobic007G130900 Sobic007G130900 Sobic003G017500--Sobic007G130900 Sobic003G017500--Sobic001G437500 Sobic003G017500--Sobic007G139500 Sobic003G017500--Sobic009G073400 Sobic003G017500--Sobic009G206500 Sobic003G017500--Sobic001G159800 Sobic003G410600 Sobic003G410600 Sobic003G017500--Sobic003G410600 Sobic004G119700 Sobic004G119700 Sobic004G270800--Sobic004G119700 Sobic009G087000 Sobic009G087000 Sobic004G270800--Sobic009G087000 Sobic003G183700 Sobic003G183700 Sobic004G270800--Sobic003G183700 Sobic005G110535 Sobic005G110535 Sobic004G270800--Sobic005G110535 Sobic010G147700 Sobic010G147700 Sobic004G270800--Sobic010G147700 Sobic003G369200 Sobic003G369200 Sobic004G270800--Sobic003G369200 Sobic006G051000 Sobic006G051000 Sobic004G270800--Sobic006G051000 Sobic006G195500 Sobic006G195500 Sobic004G270800--Sobic006G195500 Sobic008G129200 Sobic008G129200 Sobic004G270800--Sobic008G129200 Sobic005G204700 Sobic005G204700 Sobic004G249100--Sobic005G204700 Sobic004G053300 Sobic004G053300 Sobic004G249100--Sobic004G053300 Sobic004G249100--Sobic003G410600 Sobic003G277900 Sobic003G277900 Sobic004G249100--Sobic003G277900 Sobic004G286700 Sobic004G286700 Sobic004G249100--Sobic004G286700 Sobic005G159600 Sobic005G159600 Sobic004G249100--Sobic005G159600 Sobic002G393200 Sobic002G393200 Sobic004G249100--Sobic002G393200 Sobic010G042600 Sobic010G042600 Sobic004G249100--Sobic010G042600 Sobic004G249100--Sobic009G167800 Sobic009G125900 Sobic009G125900 Sobic009G063400--Sobic009G125900 Sobic002G075500 Sobic002G075500 Sobic009G063400--Sobic002G075500 Sobic009G026101 Sobic009G026101 Sobic009G063400--Sobic009G026101 Sobic002G118700 Sobic002G118700 Sobic009G063400--Sobic002G118700 Sobic010G096100 Sobic010G096100 Sobic009G063400--Sobic010G096100 Sobic001G334900 Sobic001G334900 Sobic009G063400--Sobic001G334900 Sobic009G063400--Sobic010G090500 Sobic001G208600 Sobic001G208600 Sobic009G063400--Sobic001G208600 Sobic006G075000 Sobic006G075000 Sobic009G063400--Sobic006G075000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.