Gene annotation
Transcriptome id Sobic.004G325000.1
Synonym Sb04g035490
Functional annotation expressed protein
UniProt A0A194YTS9
Pfam -
Panther DB PTHR11638 PTHR11638:SF95
NCBI CDD KOG1051; Chaperone HSP104 and related ATP-dependent Clp proteases
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G57710 : Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein
RAP-DB (Rice) LOC_Os02g54720.1 : expressed protein
MaizeGDB (Corn) Zm00025a022412
Brachypodium -
Barley HORVU6Hr1G083690.1 , HORVU6Hr1G083690.2 , HORVU6Hr1G083690.3 , HORVU6Hr1G083690.6 , HORVU6Hr1G083690.7
Wheat TraesCS6B02G381800 , TraesCS6A02G348200 , TraesCS6D02G331200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G034301 - -
2 Sobic.001G514400 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
3 Sobic.005G121700 expressed protein -
4 Sobic.009G061400 leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed -
5 Sobic.005G159600 lymphoid organ expressed yellow head virus receptor protein, putative, expressed -
6 Sobic.009G167800 protein kinase family protein, putative, expressed -
7 Sobic.007G208100 heavy metal-associated domain containing protein, expressed -
8 Sobic.004G134100 glycosyltransferase, putative, expressed -
9 Sobic.005G057000 Leucine Rich Repeat family protein, expressed -
10 Sobic.009G242501 - -
11 Sobic.003G424950 - K14508: regulatory protein NPR1
12 Sobic.010G095100 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower, stem and root, expression induced by IAA and BR treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
13 Sobic.008G170400 expressed protein -
14 Sobic.002G393200 CAMK_CAMK_like.36 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
15 Sobic.002G168600 nucleobase-ascorbate transporter, putative, expressed K14611: SLC23A1, solute carrier family 23 (nucleobase transporter), member 1
16 Sobic.007G111700 glutathione S-transferase, C-terminal domain containing protein, expressed -
17 Sobic.001G345200 OsFBX94 - F-box domain containing protein, expressed -
18 Sobic.007G050500 MYB family transcription factor, putative, expressed -
19 Sobic.005G110600 glycosyl hydrolase, putative, expressed K01183: chitinase
20 Sobic.008G136100 Homologous to Dof genes in Arabidopsis and rice.(PubMedID : 21161392)@dof zinc finger domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic004G325000 Sobic004G325000 Sobic002G034301 Sobic002G034301 Sobic004G325000--Sobic002G034301 Sobic001G514400 Sobic001G514400 Sobic004G325000--Sobic001G514400 Sobic005G121700 Sobic005G121700 Sobic004G325000--Sobic005G121700 Sobic009G061400 Sobic009G061400 Sobic004G325000--Sobic009G061400 Sobic005G159600 Sobic005G159600 Sobic004G325000--Sobic005G159600 Sobic009G167800 Sobic009G167800 Sobic004G325000--Sobic009G167800 Sobic007G208100 Sobic007G208100 Sobic004G325000--Sobic007G208100 Sobic004G134100 Sobic004G134100 Sobic004G325000--Sobic004G134100 Sobic005G057000 Sobic005G057000 Sobic004G325000--Sobic005G057000 Sobic002G034301--Sobic007G208100 Sobic005G231300 Sobic005G231300 Sobic002G034301--Sobic005G231300 Sobic002G034301--Sobic005G057000 Sobic002G034301--Sobic005G121700 Sobic007G111700 Sobic007G111700 Sobic002G034301--Sobic007G111700 Sobic008G077300 Sobic008G077300 Sobic002G034301--Sobic008G077300 Sobic002G016400 Sobic002G016400 Sobic002G034301--Sobic002G016400 Sobic003G420100 Sobic003G420100 Sobic002G034301--Sobic003G420100 Sobic003G052100 Sobic003G052100 Sobic002G034301--Sobic003G052100 Sobic001G514400--Sobic005G121700 Sobic004G259101 Sobic004G259101 Sobic001G514400--Sobic004G259101 Sobic001G258100 Sobic001G258100 Sobic001G514400--Sobic001G258100 Sobic004G247300 Sobic004G247300 Sobic001G514400--Sobic004G247300 Sobic001G409700 Sobic001G409700 Sobic001G514400--Sobic001G409700 Sobic009G099700 Sobic009G099700 Sobic001G514400--Sobic009G099700 Sobic001G514400--Sobic009G061400 Sobic009G021700 Sobic009G021700 Sobic001G514400--Sobic009G021700 Sobic005G054700 Sobic005G054700 Sobic001G514400--Sobic005G054700 Sobic005G121700--Sobic001G514400 Sobic005G098400 Sobic005G098400 Sobic005G121700--Sobic005G098400 Sobic005G121700--Sobic008G077300 Sobic005G121700--Sobic009G021700 Sobic001G305300 Sobic001G305300 Sobic005G121700--Sobic001G305300 Sobic007G225400 Sobic007G225400 Sobic005G121700--Sobic007G225400 Sobic005G121700--Sobic002G034301 Sobic005G121700--Sobic007G208100 Sobic005G121700--Sobic002G016400 Sobic009G061400--Sobic002G016400 Sobic009G061400--Sobic001G409700 Sobic004G156900 Sobic004G156900 Sobic009G061400--Sobic004G156900 Sobic006G054600 Sobic006G054600 Sobic009G061400--Sobic006G054600 Sobic009G061400--Sobic005G231300 Sobic009G061400--Sobic008G077300 Sobic009G061400--Sobic007G111700 Sobic009G061400--Sobic007G208100 Sobic001G264400 Sobic001G264400 Sobic009G061400--Sobic001G264400 Sobic003G277900 Sobic003G277900 Sobic005G159600--Sobic003G277900 Sobic004G053300 Sobic004G053300 Sobic005G159600--Sobic004G053300 Sobic005G159600--Sobic004G134100 Sobic008G086200 Sobic008G086200 Sobic005G159600--Sobic008G086200 Sobic009G123500 Sobic009G123500 Sobic005G159600--Sobic009G123500 Sobic002G393200 Sobic002G393200 Sobic005G159600--Sobic002G393200 Sobic004G225700 Sobic004G225700 Sobic005G159600--Sobic004G225700 Sobic009G026200 Sobic009G026200 Sobic005G159600--Sobic009G026200 Sobic002G168600 Sobic002G168600 Sobic005G159600--Sobic002G168600 Sobic008G191500 Sobic008G191500 Sobic009G167800--Sobic008G191500 Sobic010G054100 Sobic010G054100 Sobic009G167800--Sobic010G054100 Sobic001G159800 Sobic001G159800 Sobic009G167800--Sobic001G159800 Sobic010G216000 Sobic010G216000 Sobic009G167800--Sobic010G216000 Sobic007G114500 Sobic007G114500 Sobic009G167800--Sobic007G114500 Sobic003G017500 Sobic003G017500 Sobic009G167800--Sobic003G017500 Sobic004G270800 Sobic004G270800 Sobic009G167800--Sobic004G270800 Sobic004G249100 Sobic004G249100 Sobic009G167800--Sobic004G249100 Sobic009G063400 Sobic009G063400 Sobic009G167800--Sobic009G063400 Sobic007G208100--Sobic005G231300 Sobic007G208100--Sobic002G016400 Sobic003G296500 Sobic003G296500 Sobic007G208100--Sobic003G296500 Sobic006G149300 Sobic006G149300 Sobic007G208100--Sobic006G149300 Sobic007G208100--Sobic002G034301 Sobic007G208100--Sobic003G420100 Sobic010G104400 Sobic010G104400 Sobic007G208100--Sobic010G104400 Sobic003G247600 Sobic003G247600 Sobic007G208100--Sobic003G247600 Sobic001G514300 Sobic001G514300 Sobic007G208100--Sobic001G514300 Sobic004G134100--Sobic009G026200 Sobic010G242900 Sobic010G242900 Sobic004G134100--Sobic010G242900 Sobic001G069800 Sobic001G069800 Sobic004G134100--Sobic001G069800 Sobic004G006700 Sobic004G006700 Sobic004G134100--Sobic004G006700 Sobic004G134100--Sobic005G159600 Sobic010G138500 Sobic010G138500 Sobic004G134100--Sobic010G138500 Sobic001G215900 Sobic001G215900 Sobic004G134100--Sobic001G215900 Sobic001G366800 Sobic001G366800 Sobic004G134100--Sobic001G366800 Sobic003G151300 Sobic003G151300 Sobic004G134100--Sobic003G151300 Sobic001G402400 Sobic001G402400 Sobic005G057000--Sobic001G402400 Sobic005G057000--Sobic002G034301 Sobic002G283500 Sobic002G283500 Sobic005G057000--Sobic002G283500 Sobic008G170400 Sobic008G170400 Sobic005G057000--Sobic008G170400 Sobic009G079900 Sobic009G079900 Sobic005G057000--Sobic009G079900 Sobic005G057000--Sobic003G296500 Sobic005G057000--Sobic005G231300 Sobic005G057000--Sobic007G111700 Sobic003G270400 Sobic003G270400 Sobic005G057000--Sobic003G270400
Octagon: transcription factors


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