Gene annotation
Transcriptome id Sobic.010G095100.1
Synonym PIN1, ATPIN1, Sb10g008290, efflux carriers pin-formed, SbPIN10
Functional annotation "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower, stem and root, expression induced by IAA and BR treatments" (PubMedID : 20528920)
auxin efflux carrier component, putative, expressed
UniProt C5Z7E9
Pfam PF03547
Panther DB PTHR31752 PTHR31752:SF14
NCBI CDD -
KEGG Orthology K13947; auxin efflux carrier family protein
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT1G73590 : Auxin efflux carrier family protein
RAP-DB (Rice) LOC_Os06g12610.1 : auxin efflux carrier component, putative, expressed
MaizeGDB (Corn) Zm00025a033405 , Zm00025a049447 , Zm00025a051668 , Zm00025a022017 , Zm00025a028269 , Zm00025a033214
Brachypodium KQK04736 , KQK18833 , KQJ89538 , KQK08941 , KQK01960 , KQK16936
Barley HORVU7Hr1G038700.9 , HORVU7Hr1G038700.8 , HORVU7Hr1G038700.1 , HORVU7Hr1G038700.3 , HORVU7Hr1G038700.2 , HORVU7Hr1G038700.5 , HORVU7Hr1G038700.4 , HORVU7Hr1G038700.7 , HORVU7Hr1G038700.6 , HORVU4Hr1G026680.14 , HORVU4Hr1G026680.12 , HORVU4Hr1G026680.13 , HORVU4Hr1G026680.10 , HORVU4Hr1G026680.11 , HORVU3Hr1G057630.29 , HORVU3Hr1G057630.28 , HORVU3Hr1G111420.1 , HORVU7Hr1G110470.10 , HORVU7Hr1G110470.11 , HORVU7Hr1G038700.20 , HORVU7Hr1G038700.21 , HORVU7Hr1G038700.22 , HORVU7Hr1G038700.23 , HORVU7Hr1G038700.24 , HORVU4Hr1G026680.4 , HORVU4Hr1G026680.5 , HORVU4Hr1G026680.6 , HORVU4Hr1G026680.7 , HORVU4Hr1G026680.1 , HORVU4Hr1G026680.2 , HORVU4Hr1G026680.3 , HORVU4Hr1G026680.8 , HORVU4Hr1G026680.9 , HORVU6Hr1G076110.7 , HORVU7Hr1G038700.19 , HORVU7Hr1G038700.18 , HORVU7Hr1G038700.15 , HORVU7Hr1G038700.14 , HORVU7Hr1G038700.17 , HORVU7Hr1G038700.16 , HORVU7Hr1G038700.10 , HORVU7Hr1G038700.13 , HORVU7Hr1G038700.12 , HORVU6Hr1G076110.9 , HORVU3Hr1G057630.14 , HORVU3Hr1G057630.15 , HORVU3Hr1G057630.16 , HORVU1Hr1G091030.7 , HORVU3Hr1G057630.10 , HORVU3Hr1G057630.11 , HORVU3Hr1G057630.12 , HORVU3Hr1G057630.13 , HORVU3Hr1G057630.18 , HORVU3Hr1G057630.19 , HORVU7Hr1G110470.8 , HORVU7Hr1G110470.9 , HORVU7Hr1G110470.1 , HORVU7Hr1G110470.6 , HORVU7Hr1G110470.7 , HORVU7Hr1G110470.4 , HORVU7Hr1G110470.5 , HORVU6Hr1G076110.13 , HORVU6Hr1G076110.12 , HORVU6Hr1G076110.11 , HORVU6Hr1G076110.10 , HORVU6Hr1G076110.17 , HORVU6Hr1G076110.16 , HORVU6Hr1G076110.15 , HORVU6Hr1G076110.14 , HORVU3Hr1G057630.21 , HORVU3Hr1G057630.20 , HORVU3Hr1G057630.23 , HORVU3Hr1G057630.22 , HORVU3Hr1G057630.25 , HORVU3Hr1G057630.24 , HORVU3Hr1G057630.27 , HORVU3Hr1G057630.26 , HORVU3Hr1G057630.17 , HORVU3Hr1G057630.32 , HORVU3Hr1G057630.30 , HORVU3Hr1G057630.31 , HORVU6Hr1G076110.3 , HORVU6Hr1G076110.2 , HORVU6Hr1G076110.1 , HORVU1Hr1G091030.8 , HORVU6Hr1G076110.6 , HORVU6Hr1G076110.5 , HORVU6Hr1G076110.4 , HORVU1Hr1G091030.4 , HORVU1Hr1G091030.5 , HORVU1Hr1G091030.6 , HORVU6Hr1G076110.8 , HORVU1Hr1G091030.1 , HORVU1Hr1G091030.2 , HORVU1Hr1G091030.3 , HORVU3Hr1G057630.8 , HORVU3Hr1G057630.9 , HORVU3Hr1G057630.6 , HORVU3Hr1G057630.7 , HORVU3Hr1G057630.4 , HORVU3Hr1G057630.5 , HORVU3Hr1G057630.2 , HORVU3Hr1G057630.3 , HORVU3Hr1G057630.1
Wheat TraesCS4A02G188100 , TraesCS4D02G125300 , TraesCS7D02G191600 , TraesCS3D02G221900 , TraesCS6A02G308600 , TraesCS7A02G492400 , TraesCS3A02G231500 , TraesCS6B02G337300 , TraesCS7B02G095500 , TraesCS6B02G337300 , TraesCS7A02G190600 , TraesCS6B02G337300 , TraesCS6B02G337300 , TraesCS6D02G287800 , TraesCS7B02G398100 , TraesCS3B02G260700 , TraesCS3B02G260700 , TraesCS7D02G478800 , TraesCS7D02G478800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G021700 expressed protein -
2 Sobic.002G034301 - -
3 Sobic.005G121700 expressed protein -
4 Sobic.004G054000 expressed protein -
5 Sobic.003G052900 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@-(PubMedID : 23108465)@LOB family(PubMedID : 16399802)@DUF260 domain containing protein, putative, expressed -
6 Sobic.008G143000 expressed protein -
7 Sobic.003G420100 RNA recognition motif containing protein, putative, expressed K13207: CUGBP, BRUNOL, CUG-BP- and ETR3-like factor
8 Sobic.007G208100 heavy metal-associated domain containing protein, expressed -
9 Sobic.002G124400 expansin precursor, putative, expressed -
10 Sobic.005G231300 thaumatin, putative, expressed -
11 Sobic.004G152200 glycosyltransferase, putative, expressed -
12 Sobic.009G250100 extra-large G-protein-related, putative, expressed -
13 Sobic.001G514400 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
14 Sobic.004G286700 GDSL-like lipase/acylhydrolase, putative, expressed -
15 Sobic.003G247600 serine/threonine-protein kinase, putative, expressed -
16 Sobic.004G247300 cysteine-rich repeat secretory protein precursor, putative, expressed -
17 Sobic.002G357800 SHR, putative, expressed -
18 Sobic.009G061400 leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed -
19 Sobic.010G131400 rho GDP-dissociation inhibitor 1, putative, expressed K12462: ARHGDI, Rho GDP-dissociation inhibitor
20 Sobic.009G059500 solute carrier family 35 member E3, putative, expressed K15285: solute carrier family 35, member E3


Gene co-expression network
sample Sobic010G095100 Sobic010G095100 Sobic009G021700 Sobic009G021700 Sobic010G095100--Sobic009G021700 Sobic002G034301 Sobic002G034301 Sobic010G095100--Sobic002G034301 Sobic005G121700 Sobic005G121700 Sobic010G095100--Sobic005G121700 Sobic004G054000 Sobic004G054000 Sobic010G095100--Sobic004G054000 Sobic003G052900 Sobic003G052900 Sobic010G095100--Sobic003G052900 Sobic008G143000 Sobic008G143000 Sobic010G095100--Sobic008G143000 Sobic003G420100 Sobic003G420100 Sobic010G095100--Sobic003G420100 Sobic007G208100 Sobic007G208100 Sobic010G095100--Sobic007G208100 Sobic002G124400 Sobic002G124400 Sobic010G095100--Sobic002G124400 Sobic009G021700--Sobic005G121700 Sobic009G242501 Sobic009G242501 Sobic009G021700--Sobic009G242501 Sobic007G225400 Sobic007G225400 Sobic009G021700--Sobic007G225400 Sobic009G021700--Sobic007G208100 Sobic009G021700--Sobic003G420100 Sobic009G021700--Sobic008G143000 Sobic004G170900 Sobic004G170900 Sobic009G021700--Sobic004G170900 Sobic002G280300 Sobic002G280300 Sobic009G021700--Sobic002G280300 Sobic008G077300 Sobic008G077300 Sobic009G021700--Sobic008G077300 Sobic002G034301--Sobic007G208100 Sobic005G231300 Sobic005G231300 Sobic002G034301--Sobic005G231300 Sobic005G057000 Sobic005G057000 Sobic002G034301--Sobic005G057000 Sobic002G034301--Sobic005G121700 Sobic007G111700 Sobic007G111700 Sobic002G034301--Sobic007G111700 Sobic002G034301--Sobic008G077300 Sobic002G016400 Sobic002G016400 Sobic002G034301--Sobic002G016400 Sobic002G034301--Sobic003G420100 Sobic003G052100 Sobic003G052100 Sobic002G034301--Sobic003G052100 Sobic001G514400 Sobic001G514400 Sobic005G121700--Sobic001G514400 Sobic005G098400 Sobic005G098400 Sobic005G121700--Sobic005G098400 Sobic005G121700--Sobic008G077300 Sobic005G121700--Sobic009G021700 Sobic001G305300 Sobic001G305300 Sobic005G121700--Sobic001G305300 Sobic005G121700--Sobic007G225400 Sobic005G121700--Sobic002G034301 Sobic005G121700--Sobic007G208100 Sobic005G121700--Sobic002G016400 Sobic008G168100 Sobic008G168100 Sobic004G054000--Sobic008G168100 Sobic009G250100 Sobic009G250100 Sobic004G054000--Sobic009G250100 Sobic009G059500 Sobic009G059500 Sobic004G054000--Sobic009G059500 Sobic003G324600 Sobic003G324600 Sobic004G054000--Sobic003G324600 Sobic004G054000--Sobic008G143000 Sobic006G201000 Sobic006G201000 Sobic004G054000--Sobic006G201000 Sobic001G538932 Sobic001G538932 Sobic004G054000--Sobic001G538932 Sobic007G113300 Sobic007G113300 Sobic004G054000--Sobic007G113300 Sobic010G155800 Sobic010G155800 Sobic004G054000--Sobic010G155800 Sobic004G030300 Sobic004G030300 Sobic003G052900--Sobic004G030300 Sobic001G245800 Sobic001G245800 Sobic003G052900--Sobic001G245800 Sobic001G455100 Sobic001G455100 Sobic003G052900--Sobic001G455100 Sobic008G135300 Sobic008G135300 Sobic003G052900--Sobic008G135300 Sobic002G226500 Sobic002G226500 Sobic003G052900--Sobic002G226500 Sobic008G099100 Sobic008G099100 Sobic003G052900--Sobic008G099100 Sobic001G295800 Sobic001G295800 Sobic003G052900--Sobic001G295800 Sobic003G052900--Sobic005G231300 Sobic003G247600 Sobic003G247600 Sobic003G052900--Sobic003G247600 Sobic004G156900 Sobic004G156900 Sobic008G143000--Sobic004G156900 Sobic008G143000--Sobic009G021700 Sobic003G003700 Sobic003G003700 Sobic008G143000--Sobic003G003700 Sobic008G143000--Sobic004G054000 Sobic008G143000--Sobic003G420100 Sobic001G522700 Sobic001G522700 Sobic008G143000--Sobic001G522700 Sobic002G357800 Sobic002G357800 Sobic008G143000--Sobic002G357800 Sobic008G143000--Sobic002G280300 Sobic003G151900 Sobic003G151900 Sobic008G143000--Sobic003G151900 Sobic003G420100--Sobic003G247600 Sobic004G233700 Sobic004G233700 Sobic003G420100--Sobic004G233700 Sobic003G420100--Sobic009G242501 Sobic003G420100--Sobic007G208100 Sobic004G286700 Sobic004G286700 Sobic003G420100--Sobic004G286700 Sobic005G047100 Sobic005G047100 Sobic003G420100--Sobic005G047100 Sobic008G141200 Sobic008G141200 Sobic003G420100--Sobic008G141200 Sobic004G066900 Sobic004G066900 Sobic003G420100--Sobic004G066900 Sobic003G135400 Sobic003G135400 Sobic003G420100--Sobic003G135400 Sobic007G208100--Sobic005G231300 Sobic007G208100--Sobic002G016400 Sobic003G296500 Sobic003G296500 Sobic007G208100--Sobic003G296500 Sobic006G149300 Sobic006G149300 Sobic007G208100--Sobic006G149300 Sobic007G208100--Sobic002G034301 Sobic007G208100--Sobic003G420100 Sobic010G104400 Sobic010G104400 Sobic007G208100--Sobic010G104400 Sobic007G208100--Sobic003G247600 Sobic001G514300 Sobic001G514300 Sobic007G208100--Sobic001G514300 Sobic009G061400 Sobic009G061400 Sobic002G124400--Sobic009G061400 Sobic002G124400--Sobic005G231300 Sobic004G249700 Sobic004G249700 Sobic002G124400--Sobic004G249700 Sobic002G124400--Sobic008G077300 Sobic002G124400--Sobic007G208100 Sobic002G124400--Sobic010G095100 Sobic002G124400--Sobic001G514300 Sobic002G124400--Sobic003G296500 Sobic007G091900 Sobic007G091900 Sobic002G124400--Sobic007G091900
Octagon: transcription factors


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