Gene annotation
Transcriptome id Sobic.006G177100.1
Synonym Sb06g025180
Functional annotation expressed protein
UniProt C5YDX5
Pfam PF00085
Panther DB PTHR10438 PTHR10438:SF126
NCBI CDD KOG0907; Thioredoxin
KEGG Orthology K03671; thioredoxin 1
Gene Ontology GO:0015035; protein disulfide oxidoreductase activity GO:0006662glycerol ether metabolic process


Orthologs (automatic annotation)
TAIR AT3G53220 : Thioredoxin superfamily protein
RAP-DB (Rice) LOC_Os04g47260.1 : expressed protein
MaizeGDB (Corn) Zm00025a010227
Brachypodium KQK14178 , KQK14179 , KQK14170 , KQK14171 , KQK14172 , KQK14173 , KQK14174 , KQK14175 , KQK14176 , KQK14177 , KQK14180 , PNT74434 , PNT74435 , PNT74436 , PNT74437 , PNT74432 , PNT74433 , KQK14169 , KQK14168 , KQK14167 , KQK14166
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G097400 thiol-disulphide oxidoreductase DCC, putative, expressed -
2 Sobic.002G339400 expressed protein -
3 Sobic.004G288400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed -
4 Sobic.002G366700 expressed protein -
5 Sobic.010G014300 expressed protein -
6 Sobic.009G050100 ATKINESIN-13A/KINESIN-13A, putative, expressed K11091: U1 small nuclear ribonucleoprotein A
7 Sobic.001G494150 - -
8 Sobic.003G284500 mediator of RNA polymerase II transcription subunit 22, putative, expressed K15139: mediator of RNA polymerase II transcription subunit 22
9 Sobic.006G258400 OsFBX153 - F-box domain containing protein, expressed -
10 Sobic.001G428700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
11 Sobic.010G087200 expressed protein -
12 Sobic.004G109500 - -
13 Sobic.010G119600 embryogenesis transmembrane protein, putative, expressed -
14 Sobic.001G062700 GATA zinc finger domain containing protein, expressed -
15 Sobic.006G075700 expressed protein -
16 Sobic.009G235300 hhH-GPD superfamily base excision DNA repair protein, putative, expressed K01247: DNA-3-methyladenine glycosylase II
17 Sobic.010G259200 harpin-induced protein 1 domain containing protein, expressed -
18 Sobic.003G128500 OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed -
19 Sobic.002G038400 expressed protein -
20 Sobic.001G462100 MFP1 attachment factor 1, putative, expressed -


Gene co-expression network
sample Sobic006G177100 Sobic006G177100 Sobic010G097400 Sobic010G097400 Sobic006G177100--Sobic010G097400 Sobic002G339400 Sobic002G339400 Sobic006G177100--Sobic002G339400 Sobic004G288400 Sobic004G288400 Sobic006G177100--Sobic004G288400 Sobic002G366700 Sobic002G366700 Sobic006G177100--Sobic002G366700 Sobic010G014300 Sobic010G014300 Sobic006G177100--Sobic010G014300 Sobic009G050100 Sobic009G050100 Sobic006G177100--Sobic009G050100 Sobic001G494150 Sobic001G494150 Sobic006G177100--Sobic001G494150 Sobic003G284500 Sobic003G284500 Sobic006G177100--Sobic003G284500 Sobic006G258400 Sobic006G258400 Sobic006G177100--Sobic006G258400 Sobic010G097400--Sobic006G177100 Sobic009G235300 Sobic009G235300 Sobic010G097400--Sobic009G235300 Sobic004G109500 Sobic004G109500 Sobic010G097400--Sobic004G109500 Sobic010G097400--Sobic002G366700 Sobic010G097400--Sobic003G284500 Sobic003G128500 Sobic003G128500 Sobic010G097400--Sobic003G128500 Sobic003G377200 Sobic003G377200 Sobic010G097400--Sobic003G377200 Sobic001G150800 Sobic001G150800 Sobic010G097400--Sobic001G150800 Sobic004G180600 Sobic004G180600 Sobic010G097400--Sobic004G180600 Sobic002G339400--Sobic002G366700 Sobic002G339400--Sobic001G494150 Sobic010G087200 Sobic010G087200 Sobic002G339400--Sobic010G087200 Sobic001G428700 Sobic001G428700 Sobic002G339400--Sobic001G428700 Sobic002G339400--Sobic004G288400 Sobic002G339400--Sobic010G014300 Sobic006G075700 Sobic006G075700 Sobic002G339400--Sobic006G075700 Sobic006G166700 Sobic006G166700 Sobic002G339400--Sobic006G166700 Sobic010G259200 Sobic010G259200 Sobic002G339400--Sobic010G259200 Sobic004G288400--Sobic006G166700 Sobic004G288400--Sobic010G014300 Sobic005G198300 Sobic005G198300 Sobic004G288400--Sobic005G198300 Sobic001G239400 Sobic001G239400 Sobic004G288400--Sobic001G239400 Sobic004G288400--Sobic002G339400 Sobic004G288400--Sobic010G087200 Sobic004G288400--Sobic001G428700 Sobic007G133600 Sobic007G133600 Sobic004G288400--Sobic007G133600 Sobic001G005000 Sobic001G005000 Sobic004G288400--Sobic001G005000 Sobic002G366700--Sobic001G494150 Sobic002G366700--Sobic002G339400 Sobic002G366700--Sobic010G087200 Sobic002G366700--Sobic006G075700 Sobic002G058600 Sobic002G058600 Sobic002G366700--Sobic002G058600 Sobic001G513100 Sobic001G513100 Sobic002G366700--Sobic001G513100 Sobic002G366700--Sobic010G259200 Sobic010G119600 Sobic010G119600 Sobic002G366700--Sobic010G119600 Sobic002G366700--Sobic001G428700 Sobic010G014300--Sobic010G259200 Sobic010G014300--Sobic010G119600 Sobic010G014300--Sobic010G087200 Sobic010G014300--Sobic006G166700 Sobic007G206700 Sobic007G206700 Sobic010G014300--Sobic007G206700 Sobic002G001300 Sobic002G001300 Sobic010G014300--Sobic002G001300 Sobic001G062700 Sobic001G062700 Sobic010G014300--Sobic001G062700 Sobic007G092300 Sobic007G092300 Sobic010G014300--Sobic007G092300 Sobic010G014300--Sobic001G005000 Sobic009G050100--Sobic003G284500 Sobic009G050100--Sobic001G150800 Sobic009G050100--Sobic003G128500 Sobic009G050100--Sobic006G177100 Sobic002G270100 Sobic002G270100 Sobic009G050100--Sobic002G270100 Sobic009G050100--Sobic010G097400 Sobic009G050100--Sobic003G377200 Sobic003G148500 Sobic003G148500 Sobic009G050100--Sobic003G148500 Sobic001G210700 Sobic001G210700 Sobic009G050100--Sobic001G210700 Sobic001G494150--Sobic006G075700 Sobic001G494150--Sobic010G259200 Sobic001G494150--Sobic010G119600 Sobic009G236500 Sobic009G236500 Sobic001G494150--Sobic009G236500 Sobic001G494150--Sobic002G001300 Sobic001G494150--Sobic002G366700 Sobic010G002850 Sobic010G002850 Sobic001G494150--Sobic010G002850 Sobic001G494150--Sobic010G087200 Sobic005G156700 Sobic005G156700 Sobic001G494150--Sobic005G156700 Sobic003G284500--Sobic003G128500 Sobic007G072400 Sobic007G072400 Sobic003G284500--Sobic007G072400 Sobic003G284500--Sobic004G109500 Sobic009G088401 Sobic009G088401 Sobic003G284500--Sobic009G088401 Sobic003G284500--Sobic009G050100 Sobic002G173600 Sobic002G173600 Sobic003G284500--Sobic002G173600 Sobic004G107400 Sobic004G107400 Sobic003G284500--Sobic004G107400 Sobic003G390300 Sobic003G390300 Sobic003G284500--Sobic003G390300 Sobic010G152700 Sobic010G152700 Sobic003G284500--Sobic010G152700 Sobic006G258400--Sobic002G339400 Sobic006G258400--Sobic001G428700 Sobic006G258400--Sobic002G366700 Sobic006G258400--Sobic006G177100 Sobic004G202000 Sobic004G202000 Sobic006G258400--Sobic004G202000 Sobic010G099600 Sobic010G099600 Sobic006G258400--Sobic010G099600 Sobic002G282100 Sobic002G282100 Sobic006G258400--Sobic002G282100 Sobic006G258400--Sobic010G097400 Sobic001G013600 Sobic001G013600 Sobic006G258400--Sobic001G013600
Octagon: transcription factors


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