Gene annotation
Transcriptome id Sobic.006G258400.1
Synonym Sb06g032150
Functional annotation OsFBX153 - F-box domain containing protein, expressed
UniProt C5YA17
Pfam PF00646
Panther DB PTHR32133 PTHR32133:SF103
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G15710 : Galactose oxidase/kelch repeat superfamily protein
RAP-DB (Rice) LOC_Os04g57290.1 : OsFBX153 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a057324
Brachypodium KQJ85188
Barley HORVU2Hr1G118340.1 , HORVU2Hr1G118340.2
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G339400 expressed protein -
2 Sobic.001G428700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
3 Sobic.002G366700 expressed protein -
4 Sobic.006G177100 expressed protein K03671: thioredoxin 1
5 Sobic.004G202000 expressed protein -
6 Sobic.010G099600 expressed protein -
7 Sobic.002G282100 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
8 Sobic.010G097400 thiol-disulphide oxidoreductase DCC, putative, expressed -
9 Sobic.001G013600 expressed protein -
10 Sobic.001G513100 LYR motif containing protein, putative, expressed -
11 Sobic.008G033300 sodium/calcium exchanger protein, putative, expressed K13754: SLC24A6, solute carrier family 24 (sodium/potassium/calcium exchanger), member 6
12 Sobic.008G088600 expressed protein -
13 Sobic.006G137500 B4-BTB3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed -
14 Sobic.010G087200 expressed protein -
15 Sobic.001G462100 MFP1 attachment factor 1, putative, expressed -
16 Sobic.002G038400 expressed protein -
17 Sobic.004G168800 expressed protein -
18 Sobic.002G348900 cytochrome P450, putative, expressed -
19 Sobic.003G012600 expressed protein -
20 Sobic.001G157500 expressed protein -


Gene co-expression network
sample Sobic006G258400 Sobic006G258400 Sobic002G339400 Sobic002G339400 Sobic006G258400--Sobic002G339400 Sobic001G428700 Sobic001G428700 Sobic006G258400--Sobic001G428700 Sobic002G366700 Sobic002G366700 Sobic006G258400--Sobic002G366700 Sobic006G177100 Sobic006G177100 Sobic006G258400--Sobic006G177100 Sobic004G202000 Sobic004G202000 Sobic006G258400--Sobic004G202000 Sobic010G099600 Sobic010G099600 Sobic006G258400--Sobic010G099600 Sobic002G282100 Sobic002G282100 Sobic006G258400--Sobic002G282100 Sobic010G097400 Sobic010G097400 Sobic006G258400--Sobic010G097400 Sobic001G013600 Sobic001G013600 Sobic006G258400--Sobic001G013600 Sobic002G339400--Sobic002G366700 Sobic001G494150 Sobic001G494150 Sobic002G339400--Sobic001G494150 Sobic010G087200 Sobic010G087200 Sobic002G339400--Sobic010G087200 Sobic002G339400--Sobic001G428700 Sobic004G288400 Sobic004G288400 Sobic002G339400--Sobic004G288400 Sobic010G014300 Sobic010G014300 Sobic002G339400--Sobic010G014300 Sobic006G075700 Sobic006G075700 Sobic002G339400--Sobic006G075700 Sobic006G166700 Sobic006G166700 Sobic002G339400--Sobic006G166700 Sobic010G259200 Sobic010G259200 Sobic002G339400--Sobic010G259200 Sobic001G428700--Sobic010G087200 Sobic001G428700--Sobic001G494150 Sobic001G428700--Sobic002G339400 Sobic001G428700--Sobic010G014300 Sobic002G001300 Sobic002G001300 Sobic001G428700--Sobic002G001300 Sobic001G428700--Sobic006G166700 Sobic001G428700--Sobic002G366700 Sobic001G428700--Sobic010G259200 Sobic002G348900 Sobic002G348900 Sobic001G428700--Sobic002G348900 Sobic002G366700--Sobic001G494150 Sobic002G366700--Sobic002G339400 Sobic002G366700--Sobic010G087200 Sobic002G366700--Sobic006G075700 Sobic002G058600 Sobic002G058600 Sobic002G366700--Sobic002G058600 Sobic001G513100 Sobic001G513100 Sobic002G366700--Sobic001G513100 Sobic002G366700--Sobic010G259200 Sobic010G119600 Sobic010G119600 Sobic002G366700--Sobic010G119600 Sobic002G366700--Sobic001G428700 Sobic006G177100--Sobic010G097400 Sobic006G177100--Sobic002G339400 Sobic006G177100--Sobic004G288400 Sobic006G177100--Sobic002G366700 Sobic006G177100--Sobic010G014300 Sobic009G050100 Sobic009G050100 Sobic006G177100--Sobic009G050100 Sobic006G177100--Sobic001G494150 Sobic003G284500 Sobic003G284500 Sobic006G177100--Sobic003G284500 Sobic006G177100--Sobic006G258400 Sobic004G335600 Sobic004G335600 Sobic004G202000--Sobic004G335600 Sobic001G076800 Sobic001G076800 Sobic004G202000--Sobic001G076800 Sobic002G414700 Sobic002G414700 Sobic004G202000--Sobic002G414700 Sobic002G348100 Sobic002G348100 Sobic004G202000--Sobic002G348100 Sobic003G288100 Sobic003G288100 Sobic004G202000--Sobic003G288100 Sobic004G099500 Sobic004G099500 Sobic004G202000--Sobic004G099500 Sobic002G245900 Sobic002G245900 Sobic004G202000--Sobic002G245900 Sobic008G172100 Sobic008G172100 Sobic004G202000--Sobic008G172100 Sobic004G271400 Sobic004G271400 Sobic004G202000--Sobic004G271400 Sobic005G075900 Sobic005G075900 Sobic010G099600--Sobic005G075900 Sobic010G099600--Sobic002G339400 Sobic002G311400 Sobic002G311400 Sobic010G099600--Sobic002G311400 Sobic010G099600--Sobic001G428700 Sobic010G099600--Sobic004G288400 Sobic010G099600--Sobic004G202000 Sobic006G157200 Sobic006G157200 Sobic010G099600--Sobic006G157200 Sobic010G099600--Sobic006G166700 Sobic010G099600--Sobic002G348900 Sobic009G190400 Sobic009G190400 Sobic002G282100--Sobic009G190400 Sobic003G040100 Sobic003G040100 Sobic002G282100--Sobic003G040100 Sobic004G061600 Sobic004G061600 Sobic002G282100--Sobic004G061600 Sobic001G062700 Sobic001G062700 Sobic002G282100--Sobic001G062700 Sobic004G156600 Sobic004G156600 Sobic002G282100--Sobic004G156600 Sobic006G155900 Sobic006G155900 Sobic002G282100--Sobic006G155900 Sobic005G168500 Sobic005G168500 Sobic002G282100--Sobic005G168500 Sobic007G076800 Sobic007G076800 Sobic002G282100--Sobic007G076800 Sobic003G390300 Sobic003G390300 Sobic002G282100--Sobic003G390300 Sobic010G097400--Sobic006G177100 Sobic009G235300 Sobic009G235300 Sobic010G097400--Sobic009G235300 Sobic004G109500 Sobic004G109500 Sobic010G097400--Sobic004G109500 Sobic010G097400--Sobic002G366700 Sobic010G097400--Sobic003G284500 Sobic003G128500 Sobic003G128500 Sobic010G097400--Sobic003G128500 Sobic003G377200 Sobic003G377200 Sobic010G097400--Sobic003G377200 Sobic001G150800 Sobic001G150800 Sobic010G097400--Sobic001G150800 Sobic004G180600 Sobic004G180600 Sobic010G097400--Sobic004G180600 Sobic006G255800 Sobic006G255800 Sobic001G013600--Sobic006G255800 Sobic001G013600--Sobic002G366700 Sobic010G027800 Sobic010G027800 Sobic001G013600--Sobic010G027800 Sobic009G155500 Sobic009G155500 Sobic001G013600--Sobic009G155500 Sobic006G169400 Sobic006G169400 Sobic001G013600--Sobic006G169400 Sobic001G013600--Sobic006G258400 Sobic001G402701 Sobic001G402701 Sobic001G013600--Sobic001G402701 Sobic001G013600--Sobic002G339400 Sobic006G245200 Sobic006G245200 Sobic001G013600--Sobic006G245200
Octagon: transcription factors


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