Gene annotation
Transcriptome id Sobic.004G202000.1
Synonym Sb04g024830
Functional annotation expressed protein
UniProt C5XWJ6
Pfam PF03879
Panther DB PTHR13557
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G31410 : -
RAP-DB (Rice) LOC_Os02g38190.1 : expressed protein
MaizeGDB (Corn) Zm00025a021314 , Zm00025a031831
Brachypodium KQK00161
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G202000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G335600 40S ribosomal protein S30, putative, expressed K02983: RP-S30e, small subunit ribosomal protein S30e
2 Sobic.001G076800 expressed protein -
3 Sobic.002G414700 60S ribosomal protein L22-2, putative, expressed K02891: RP-L22e, large subunit ribosomal protein L22e
4 Sobic.002G348100 40S ribosomal protein S13, putative, expressed K02953: RP-S13e, small subunit ribosomal protein S13e
5 Sobic.003G288100 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
6 Sobic.004G099500 40S ribosomal protein S24, putative, expressed K02974: RP-S24e, small subunit ribosomal protein S24e
7 Sobic.002G245900 AGC_PVPK_like_CDK8.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
8 Sobic.008G172100 ribosomal protein, putative, expressed K02874: RP-L14, MRPL14, large subunit ribosomal protein L14
9 Sobic.004G271400 L11 domain containing ribosomal protein, putative, expressed K02870: RP-L12e, large subunit ribosomal protein L12e
10 Sobic.007G211700 60S ribosomal protein L31, putative, expressed K02910: RP-L31e, large subunit ribosomal protein L31e
11 Sobic.001G004800 receptor protein kinase, putative, expressed -
12 Sobic.001G142300 expressed protein -
13 Sobic.009G242300 60S acidic ribosomal protein, putative, expressed K02943: RP-LP2, large subunit ribosomal protein LP2
14 Sobic.001G508900 60S ribosomal protein L21-2, putative, expressed K02889: RP-L21e, large subunit ribosomal protein L21e
15 Sobic.001G295100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.010G099600 expressed protein -
17 Sobic.001G175300 ribosomal protein L24, putative, expressed K02896: RP-L24e, large subunit ribosomal protein L24e
18 Sobic.004G055100 60S ribosomal protein, putative, expressed K02900: RP-L27Ae, large subunit ribosomal protein L27Ae
19 Sobic.009G105600 60S ribosomal protein L29-2, putative, expressed K02905: RP-L29e, large subunit ribosomal protein L29e
20 Sobic.004G288400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed -


Gene co-expression network
sample Sobic004G202000 Sobic004G202000 Sobic004G335600 Sobic004G335600 Sobic004G202000--Sobic004G335600 Sobic001G076800 Sobic001G076800 Sobic004G202000--Sobic001G076800 Sobic002G414700 Sobic002G414700 Sobic004G202000--Sobic002G414700 Sobic002G348100 Sobic002G348100 Sobic004G202000--Sobic002G348100 Sobic003G288100 Sobic003G288100 Sobic004G202000--Sobic003G288100 Sobic004G099500 Sobic004G099500 Sobic004G202000--Sobic004G099500 Sobic002G245900 Sobic002G245900 Sobic004G202000--Sobic002G245900 Sobic008G172100 Sobic008G172100 Sobic004G202000--Sobic008G172100 Sobic004G271400 Sobic004G271400 Sobic004G202000--Sobic004G271400 Sobic004G335600--Sobic004G271400 Sobic004G335600--Sobic002G414700 Sobic009G177700 Sobic009G177700 Sobic004G335600--Sobic009G177700 Sobic003G152600 Sobic003G152600 Sobic004G335600--Sobic003G152600 Sobic004G335600--Sobic004G099500 Sobic009G105600 Sobic009G105600 Sobic004G335600--Sobic009G105600 Sobic010G057100 Sobic010G057100 Sobic004G335600--Sobic010G057100 Sobic004G335600--Sobic008G172100 Sobic007G045700 Sobic007G045700 Sobic004G335600--Sobic007G045700 Sobic005G011300 Sobic005G011300 Sobic001G076800--Sobic005G011300 Sobic001G502400 Sobic001G502400 Sobic001G076800--Sobic001G502400 Sobic002G188900 Sobic002G188900 Sobic001G076800--Sobic002G188900 Sobic004G141200 Sobic004G141200 Sobic001G076800--Sobic004G141200 Sobic005G107900 Sobic005G107900 Sobic001G076800--Sobic005G107900 Sobic004G100700 Sobic004G100700 Sobic001G076800--Sobic004G100700 Sobic001G313600 Sobic001G313600 Sobic001G076800--Sobic001G313600 Sobic003G432700 Sobic003G432700 Sobic001G076800--Sobic003G432700 Sobic003G382800 Sobic003G382800 Sobic001G076800--Sobic003G382800 Sobic002G414700--Sobic004G271400 Sobic001G402050 Sobic001G402050 Sobic002G414700--Sobic001G402050 Sobic001G508900 Sobic001G508900 Sobic002G414700--Sobic001G508900 Sobic007G184600 Sobic007G184600 Sobic002G414700--Sobic007G184600 Sobic001G175300 Sobic001G175300 Sobic002G414700--Sobic001G175300 Sobic001G493001 Sobic001G493001 Sobic002G414700--Sobic001G493001 Sobic003G078200 Sobic003G078200 Sobic002G414700--Sobic003G078200 Sobic004G055100 Sobic004G055100 Sobic002G414700--Sobic004G055100 Sobic006G067800 Sobic006G067800 Sobic002G414700--Sobic006G067800 Sobic002G372400 Sobic002G372400 Sobic002G348100--Sobic002G372400 Sobic002G348100--Sobic001G175300 Sobic002G348100--Sobic003G078200 Sobic001G055600 Sobic001G055600 Sobic002G348100--Sobic001G055600 Sobic009G242300 Sobic009G242300 Sobic002G348100--Sobic009G242300 Sobic006G137800 Sobic006G137800 Sobic002G348100--Sobic006G137800 Sobic009G054800 Sobic009G054800 Sobic002G348100--Sobic009G054800 Sobic004G198400 Sobic004G198400 Sobic002G348100--Sobic004G198400 Sobic002G348100--Sobic004G055100 Sobic003G382600 Sobic003G382600 Sobic003G288100--Sobic003G382600 Sobic001G018300 Sobic001G018300 Sobic003G288100--Sobic001G018300 Sobic002G192000 Sobic002G192000 Sobic003G288100--Sobic002G192000 Sobic001G231400 Sobic001G231400 Sobic003G288100--Sobic001G231400 Sobic001G318700 Sobic001G318700 Sobic003G288100--Sobic001G318700 Sobic003G369100 Sobic003G369100 Sobic003G288100--Sobic003G369100 Sobic004G243100 Sobic004G243100 Sobic003G288100--Sobic004G243100 Sobic001G140900 Sobic001G140900 Sobic003G288100--Sobic001G140900 Sobic008G050600 Sobic008G050600 Sobic003G288100--Sobic008G050600 Sobic004G099500--Sobic010G057100 Sobic004G099500--Sobic004G335600 Sobic009G015000 Sobic009G015000 Sobic004G099500--Sobic009G015000 Sobic003G338966 Sobic003G338966 Sobic004G099500--Sobic003G338966 Sobic004G099500--Sobic008G172100 Sobic004G099500--Sobic007G045700 Sobic003G057366 Sobic003G057366 Sobic004G099500--Sobic003G057366 Sobic004G099500--Sobic004G271400 Sobic003G322532 Sobic003G322532 Sobic004G099500--Sobic003G322532 Sobic009G008300 Sobic009G008300 Sobic002G245900--Sobic009G008300 Sobic007G133600 Sobic007G133600 Sobic002G245900--Sobic007G133600 Sobic010G067300 Sobic010G067300 Sobic002G245900--Sobic010G067300 Sobic002G245900--Sobic001G076800 Sobic002G245900--Sobic004G335600 Sobic004G042700 Sobic004G042700 Sobic002G245900--Sobic004G042700 Sobic002G245900--Sobic004G099500 Sobic001G239400 Sobic001G239400 Sobic002G245900--Sobic001G239400 Sobic009G032700 Sobic009G032700 Sobic002G245900--Sobic009G032700 Sobic008G172100--Sobic004G335600 Sobic008G172100--Sobic001G175300 Sobic008G172100--Sobic004G271400 Sobic008G172100--Sobic004G099500 Sobic008G172100--Sobic002G414700 Sobic008G172100--Sobic003G338966 Sobic008G172100--Sobic009G242300 Sobic008G172100--Sobic001G508900 Sobic008G172100--Sobic007G045700 Sobic004G271400--Sobic003G152600 Sobic004G271400--Sobic002G414700 Sobic003G322400 Sobic003G322400 Sobic004G271400--Sobic003G322400 Sobic001G054900 Sobic001G054900 Sobic004G271400--Sobic001G054900 Sobic005G019700 Sobic005G019700 Sobic004G271400--Sobic005G019700 Sobic009G050300 Sobic009G050300 Sobic004G271400--Sobic009G050300 Sobic004G331400 Sobic004G331400 Sobic004G271400--Sobic004G331400 Sobic004G008400 Sobic004G008400 Sobic004G271400--Sobic004G008400 Sobic007G178600 Sobic007G178600 Sobic004G271400--Sobic007G178600
Octagon: transcription factors


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