Gene annotation
Transcriptome id Sobic.001G142300.2,Sobic.001G142300.1
Synonym Sb01g012390
Functional annotation expressed protein
UniProt C5WQA6
Pfam -
Panther DB PTHR34936 PTHR34936:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G20460 : -
RAP-DB (Rice) LOC_Os03g46681.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU4Hr1G003080.3 , HORVU4Hr1G003080.1 , HORVU4Hr1G003080.6 , HORVU4Hr1G003080.5
Wheat TraesCS4D02G018400 , TraesCS4A02G293100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G202000 expressed protein -
2 Sobic.001G295100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.003G288100 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
4 Sobic.004G159400 hydrolase, NUDIX family, domain containing protein, expressed K07766: diphosphoinositol-polyphosphate diphosphatase
5 Sobic.004G259432 - -
6 Sobic.006G154400 GEM, putative, expressed -
7 Sobic.002G353800 homeobox domain containing protein, expressed K09338: homeobox-leucine zipper protein
8 Sobic.004G335600 40S ribosomal protein S30, putative, expressed K02983: RP-S30e, small subunit ribosomal protein S30e
9 Sobic.002G355100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@STE_PAK_Ste20_Slob_Wnk.5 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08867: WNK, WNK lysine deficient protein kinase
10 Sobic.009G168900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed -
11 Sobic.001G076800 expressed protein -
12 Sobic.001G004800 receptor protein kinase, putative, expressed -
13 Sobic.001G247300 "Ca ATPase, IIB type"(PubMedID : 22196357)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
14 Sobic.002G136700 expressed protein -
15 Sobic.009G069700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@Transcriptional repressor(PubMedID : 30367619)@OsIAA16 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
16 Sobic.009G224500 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
17 Sobic.002G245900 AGC_PVPK_like_CDK8.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
18 Sobic.007G192300 peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.004G042700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endoglucanase, putative, expressed -
20 Sobic.004G228700 expressed protein -


Gene co-expression network
sample Sobic001G142300 Sobic001G142300 Sobic004G202000 Sobic004G202000 Sobic001G142300--Sobic004G202000 Sobic001G295100 Sobic001G295100 Sobic001G142300--Sobic001G295100 Sobic003G288100 Sobic003G288100 Sobic001G142300--Sobic003G288100 Sobic004G159400 Sobic004G159400 Sobic001G142300--Sobic004G159400 Sobic004G259432 Sobic004G259432 Sobic001G142300--Sobic004G259432 Sobic006G154400 Sobic006G154400 Sobic001G142300--Sobic006G154400 Sobic002G353800 Sobic002G353800 Sobic001G142300--Sobic002G353800 Sobic004G335600 Sobic004G335600 Sobic001G142300--Sobic004G335600 Sobic002G355100 Sobic002G355100 Sobic001G142300--Sobic002G355100 Sobic004G202000--Sobic004G335600 Sobic001G076800 Sobic001G076800 Sobic004G202000--Sobic001G076800 Sobic002G414700 Sobic002G414700 Sobic004G202000--Sobic002G414700 Sobic002G348100 Sobic002G348100 Sobic004G202000--Sobic002G348100 Sobic004G202000--Sobic003G288100 Sobic004G099500 Sobic004G099500 Sobic004G202000--Sobic004G099500 Sobic002G245900 Sobic002G245900 Sobic004G202000--Sobic002G245900 Sobic008G172100 Sobic008G172100 Sobic004G202000--Sobic008G172100 Sobic004G271400 Sobic004G271400 Sobic004G202000--Sobic004G271400 Sobic003G273000 Sobic003G273000 Sobic001G295100--Sobic003G273000 Sobic001G513300 Sobic001G513300 Sobic001G295100--Sobic001G513300 Sobic001G508466 Sobic001G508466 Sobic001G295100--Sobic001G508466 Sobic004G232500 Sobic004G232500 Sobic001G295100--Sobic004G232500 Sobic004G228700 Sobic004G228700 Sobic001G295100--Sobic004G228700 Sobic001G295100--Sobic004G159400 Sobic001G295100--Sobic002G348100 Sobic004G146000 Sobic004G146000 Sobic001G295100--Sobic004G146000 Sobic001G437000 Sobic001G437000 Sobic001G295100--Sobic001G437000 Sobic003G382600 Sobic003G382600 Sobic003G288100--Sobic003G382600 Sobic001G018300 Sobic001G018300 Sobic003G288100--Sobic001G018300 Sobic002G192000 Sobic002G192000 Sobic003G288100--Sobic002G192000 Sobic001G231400 Sobic001G231400 Sobic003G288100--Sobic001G231400 Sobic001G318700 Sobic001G318700 Sobic003G288100--Sobic001G318700 Sobic003G369100 Sobic003G369100 Sobic003G288100--Sobic003G369100 Sobic004G243100 Sobic004G243100 Sobic003G288100--Sobic004G243100 Sobic001G140900 Sobic001G140900 Sobic003G288100--Sobic001G140900 Sobic008G050600 Sobic008G050600 Sobic003G288100--Sobic008G050600 Sobic001G197000 Sobic001G197000 Sobic004G159400--Sobic001G197000 Sobic004G159400--Sobic001G508466 Sobic008G006300 Sobic008G006300 Sobic004G159400--Sobic008G006300 Sobic001G047800 Sobic001G047800 Sobic004G159400--Sobic001G047800 Sobic004G159400--Sobic003G273000 Sobic002G418400 Sobic002G418400 Sobic004G159400--Sobic002G418400 Sobic002G329900 Sobic002G329900 Sobic004G159400--Sobic002G329900 Sobic004G159400--Sobic004G259432 Sobic004G159400--Sobic004G232500 Sobic004G259432--Sobic002G418400 Sobic007G151100 Sobic007G151100 Sobic004G259432--Sobic007G151100 Sobic004G259432--Sobic004G159400 Sobic004G340900 Sobic004G340900 Sobic004G259432--Sobic004G340900 Sobic005G018700 Sobic005G018700 Sobic004G259432--Sobic005G018700 Sobic009G188000 Sobic009G188000 Sobic004G259432--Sobic009G188000 Sobic003G037800 Sobic003G037800 Sobic004G259432--Sobic003G037800 Sobic002G245100 Sobic002G245100 Sobic004G259432--Sobic002G245100 Sobic005G168100 Sobic005G168100 Sobic004G259432--Sobic005G168100 Sobic006G154500 Sobic006G154500 Sobic006G154400--Sobic006G154500 Sobic010G175800 Sobic010G175800 Sobic006G154400--Sobic010G175800 Sobic004G161751 Sobic004G161751 Sobic006G154400--Sobic004G161751 Sobic010G062300 Sobic010G062300 Sobic006G154400--Sobic010G062300 Sobic002G369400 Sobic002G369400 Sobic006G154400--Sobic002G369400 Sobic003G079200 Sobic003G079200 Sobic006G154400--Sobic003G079200 Sobic009G145600 Sobic009G145600 Sobic006G154400--Sobic009G145600 Sobic009G145700 Sobic009G145700 Sobic006G154400--Sobic009G145700 Sobic006G008000 Sobic006G008000 Sobic006G154400--Sobic006G008000 Sobic009G075900 Sobic009G075900 Sobic002G353800--Sobic009G075900 Sobic003G303100 Sobic003G303100 Sobic002G353800--Sobic003G303100 Sobic004G203700 Sobic004G203700 Sobic002G353800--Sobic004G203700 Sobic009G159200 Sobic009G159200 Sobic002G353800--Sobic009G159200 Sobic001G004800 Sobic001G004800 Sobic002G353800--Sobic001G004800 Sobic001G372100 Sobic001G372100 Sobic002G353800--Sobic001G372100 Sobic001G070800 Sobic001G070800 Sobic002G353800--Sobic001G070800 Sobic002G353800--Sobic008G050600 Sobic003G345100 Sobic003G345100 Sobic002G353800--Sobic003G345100 Sobic004G335600--Sobic004G271400 Sobic004G335600--Sobic002G414700 Sobic009G177700 Sobic009G177700 Sobic004G335600--Sobic009G177700 Sobic003G152600 Sobic003G152600 Sobic004G335600--Sobic003G152600 Sobic004G335600--Sobic004G099500 Sobic009G105600 Sobic009G105600 Sobic004G335600--Sobic009G105600 Sobic010G057100 Sobic010G057100 Sobic004G335600--Sobic010G057100 Sobic004G335600--Sobic008G172100 Sobic007G045700 Sobic007G045700 Sobic004G335600--Sobic007G045700 Sobic009G168900 Sobic009G168900 Sobic002G355100--Sobic009G168900 Sobic001G304700 Sobic001G304700 Sobic002G355100--Sobic001G304700 Sobic002G355100--Sobic001G508466 Sobic002G336600 Sobic002G336600 Sobic002G355100--Sobic002G336600 Sobic002G055600 Sobic002G055600 Sobic002G355100--Sobic002G055600 Sobic005G196800 Sobic005G196800 Sobic002G355100--Sobic005G196800 Sobic004G237800 Sobic004G237800 Sobic002G355100--Sobic004G237800 Sobic010G086200 Sobic010G086200 Sobic002G355100--Sobic010G086200 Sobic004G061200 Sobic004G061200 Sobic002G355100--Sobic004G061200
Octagon: transcription factors


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