Gene annotation
Transcriptome id Sobic.007G211700.1
Synonym Sb07g027890
Functional annotation 60S ribosomal protein L31, putative, expressed
UniProt C5YIT9
Pfam PF01198
Panther DB PTHR10956 PTHR10956:SF12
NCBI CDD KOG0893; 60S ribosomal protein L31
KEGG Orthology K02910; RP-L31e, large subunit ribosomal protein L31e
Gene Ontology GO:0006412; translation GO:0005840ribosome GO:0005622intracellular GO:0003735structural constituent of ribosome


Orthologs (automatic annotation)
TAIR AT2G19740 : Ribosomal protein L31e family protein
RAP-DB (Rice) LOC_Os08g39500.1 : 60S ribosomal protein L31, putative, expressed
MaizeGDB (Corn) Zm00025a050628 , Zm00025a032576 , Zm00025a021822
Brachypodium KQK01038 , KQJ98901
Barley HORVU7Hr1G050170.1 , HORVU7Hr1G050170.2 , HORVU7Hr1G050170.3
Wheat TraesCS6D02G262100 , TraesCS7B02G146600 , TraesCS6B02G310100 , TraesCS7A02G244800 , TraesCS7D02G243500
Populus -


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cDNA sequences
Sobic.007G211700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G414700 60S ribosomal protein L22-2, putative, expressed K02891: RP-L22e, large subunit ribosomal protein L22e
2 Sobic.009G105600 60S ribosomal protein L29-2, putative, expressed K02905: RP-L29e, large subunit ribosomal protein L29e
3 Sobic.004G046200 sulfotransferase domain containing protein, expressed -
4 Sobic.003G322532 - K02975: RP-S25e, small subunit ribosomal protein S25e
5 Sobic.006G277600 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.003G084400 ZOS1-03 - C2H2 zinc finger protein, expressed -
7 Sobic.009G105700 60S ribosomal protein L29-2, putative, expressed K02905: RP-L29e, large subunit ribosomal protein L29e
8 Sobic.003G264600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
9 Sobic.004G271400 L11 domain containing ribosomal protein, putative, expressed K02870: RP-L12e, large subunit ribosomal protein L12e
10 Sobic.007G184600 60S ribosomal protein L38, putative, expressed K02923: RP-L38e, large subunit ribosomal protein L38e
11 Sobic.003G152600 40S ribosomal protein S27a, putative, expressed K02977: RP-S27Ae, RPS27A, ubiquitin-small subunit ribosomal protein S27Ae
12 Sobic.009G111000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed K01051: pectinesterase
13 Sobic.002G366600 expressed protein -
14 Sobic.004G331400 60S ribosomal protein L39, putative, expressed K02924: RP-L39e, large subunit ribosomal protein L39e
15 Sobic.010G063801 - K02924: RP-L39e, large subunit ribosomal protein L39e
16 Sobic.002G017800 expressed protein -
17 Sobic.002G327300 expressed protein -
18 Sobic.010G008400 bark storage protein A precursor, putative, expressed -
19 Sobic.001G231700 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
20 Sobic.001G325400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -


Gene co-expression network
sample Sobic007G211700 Sobic007G211700 Sobic002G414700 Sobic002G414700 Sobic007G211700--Sobic002G414700 Sobic009G105600 Sobic009G105600 Sobic007G211700--Sobic009G105600 Sobic004G046200 Sobic004G046200 Sobic007G211700--Sobic004G046200 Sobic003G322532 Sobic003G322532 Sobic007G211700--Sobic003G322532 Sobic006G277600 Sobic006G277600 Sobic007G211700--Sobic006G277600 Sobic003G084400 Sobic003G084400 Sobic007G211700--Sobic003G084400 Sobic009G105700 Sobic009G105700 Sobic007G211700--Sobic009G105700 Sobic003G264600 Sobic003G264600 Sobic007G211700--Sobic003G264600 Sobic004G271400 Sobic004G271400 Sobic007G211700--Sobic004G271400 Sobic002G414700--Sobic004G271400 Sobic001G402050 Sobic001G402050 Sobic002G414700--Sobic001G402050 Sobic001G508900 Sobic001G508900 Sobic002G414700--Sobic001G508900 Sobic007G184600 Sobic007G184600 Sobic002G414700--Sobic007G184600 Sobic001G175300 Sobic001G175300 Sobic002G414700--Sobic001G175300 Sobic001G493001 Sobic001G493001 Sobic002G414700--Sobic001G493001 Sobic003G078200 Sobic003G078200 Sobic002G414700--Sobic003G078200 Sobic004G055100 Sobic004G055100 Sobic002G414700--Sobic004G055100 Sobic006G067800 Sobic006G067800 Sobic002G414700--Sobic006G067800 Sobic009G105600--Sobic009G105700 Sobic004G331400 Sobic004G331400 Sobic009G105600--Sobic004G331400 Sobic002G175100 Sobic002G175100 Sobic009G105600--Sobic002G175100 Sobic009G105600--Sobic004G271400 Sobic009G105600--Sobic002G414700 Sobic009G105600--Sobic007G184600 Sobic003G322400 Sobic003G322400 Sobic009G105600--Sobic003G322400 Sobic006G047400 Sobic006G047400 Sobic009G105600--Sobic006G047400 Sobic001G374700 Sobic001G374700 Sobic009G105600--Sobic001G374700 Sobic008G106700 Sobic008G106700 Sobic004G046200--Sobic008G106700 Sobic006G044100 Sobic006G044100 Sobic004G046200--Sobic006G044100 Sobic009G187200 Sobic009G187200 Sobic004G046200--Sobic009G187200 Sobic006G199800 Sobic006G199800 Sobic004G046200--Sobic006G199800 Sobic004G046200--Sobic003G084400 Sobic003G255200 Sobic003G255200 Sobic004G046200--Sobic003G255200 Sobic001G500000 Sobic001G500000 Sobic004G046200--Sobic001G500000 Sobic003G079400 Sobic003G079400 Sobic004G046200--Sobic003G079400 Sobic009G111000 Sobic009G111000 Sobic004G046200--Sobic009G111000 Sobic003G322532--Sobic002G414700 Sobic001G295200 Sobic001G295200 Sobic003G322532--Sobic001G295200 Sobic003G322532--Sobic007G211700 Sobic005G107900 Sobic005G107900 Sobic003G322532--Sobic005G107900 Sobic001G367600 Sobic001G367600 Sobic003G322532--Sobic001G367600 Sobic003G152600 Sobic003G152600 Sobic003G322532--Sobic003G152600 Sobic003G043600 Sobic003G043600 Sobic003G322532--Sobic003G043600 Sobic003G322532--Sobic009G111000 Sobic003G322532--Sobic001G493001 Sobic002G354100 Sobic002G354100 Sobic006G277600--Sobic002G354100 Sobic001G231700 Sobic001G231700 Sobic006G277600--Sobic001G231700 Sobic003G117600 Sobic003G117600 Sobic006G277600--Sobic003G117600 Sobic007G227300 Sobic007G227300 Sobic006G277600--Sobic007G227300 Sobic006G099900 Sobic006G099900 Sobic006G277600--Sobic006G099900 Sobic001G503100 Sobic001G503100 Sobic006G277600--Sobic001G503100 Sobic006G277600--Sobic007G184600 Sobic006G277600--Sobic009G111000 Sobic005G206601 Sobic005G206601 Sobic006G277600--Sobic005G206601 Sobic005G011300 Sobic005G011300 Sobic003G084400--Sobic005G011300 Sobic003G084400--Sobic001G500000 Sobic002G188900 Sobic002G188900 Sobic003G084400--Sobic002G188900 Sobic003G084400--Sobic004G046200 Sobic001G304100 Sobic001G304100 Sobic003G084400--Sobic001G304100 Sobic003G084400--Sobic001G367600 Sobic003G084400--Sobic005G107900 Sobic004G100700 Sobic004G100700 Sobic003G084400--Sobic004G100700 Sobic001G313600 Sobic001G313600 Sobic003G084400--Sobic001G313600 Sobic009G105700--Sobic004G331400 Sobic001G376600 Sobic001G376600 Sobic009G105700--Sobic001G376600 Sobic009G105700--Sobic002G175100 Sobic009G105700--Sobic006G047400 Sobic009G105700--Sobic003G322400 Sobic003G346600 Sobic003G346600 Sobic009G105700--Sobic003G346600 Sobic009G105700--Sobic001G493001 Sobic009G105700--Sobic009G105600 Sobic010G063801 Sobic010G063801 Sobic009G105700--Sobic010G063801 Sobic003G408100 Sobic003G408100 Sobic003G264600--Sobic003G408100 Sobic003G264600--Sobic010G063801 Sobic001G318500 Sobic001G318500 Sobic003G264600--Sobic001G318500 Sobic001G054900 Sobic001G054900 Sobic003G264600--Sobic001G054900 Sobic002G327300 Sobic002G327300 Sobic003G264600--Sobic002G327300 Sobic004G340900 Sobic004G340900 Sobic003G264600--Sobic004G340900 Sobic003G228200 Sobic003G228200 Sobic003G264600--Sobic003G228200 Sobic006G116700 Sobic006G116700 Sobic003G264600--Sobic006G116700 Sobic006G141700 Sobic006G141700 Sobic003G264600--Sobic006G141700 Sobic004G271400--Sobic003G152600 Sobic004G271400--Sobic002G414700 Sobic004G271400--Sobic003G322400 Sobic004G271400--Sobic001G054900 Sobic005G019700 Sobic005G019700 Sobic004G271400--Sobic005G019700 Sobic009G050300 Sobic009G050300 Sobic004G271400--Sobic009G050300 Sobic004G271400--Sobic004G331400 Sobic004G008400 Sobic004G008400 Sobic004G271400--Sobic004G008400 Sobic007G178600 Sobic007G178600 Sobic004G271400--Sobic007G178600
Octagon: transcription factors


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