Gene annotation
Transcriptome id Sobic.006G137500.1
Synonym Sb06g021690
Functional annotation B4-BTB3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed
UniProt A0A1Z5REF9
Pfam PF02214
Panther DB PTHR14499 PTHR14499:SF70
NCBI CDD KOG2714; SETA binding protein SB1 and related proteins, contain BTB/POZ domain
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G24240 : BTB/POZ domain with WD40/YVTN repeat-like protein
RAP-DB (Rice) LOC_Os04g42310.1 : B4-BTB3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed
MaizeGDB (Corn) Zm00025a021191 , Zm00025a056413
Brachypodium KQK10921 , PNT61396 , PNT61395 , KQK00308
Barley HORVU2Hr1G086690.2 , HORVU2Hr1G086690.1 , HORVU6Hr1G056460.1 , HORVU6Hr1G056460.3 , HORVU6Hr1G056460.2
Wheat TraesCS1A02G380600
Populus -


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cDNA sequences
Sobic.006G137500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G146400 anther-specific protein SF18 precursor, putative, expressed -
2 Sobic.001G076800 expressed protein -
3 Sobic.007G192300 peroxidase precursor, putative, expressed K00430: peroxidase
4 Sobic.009G148100 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
5 Sobic.009G179500 expressed protein -
6 Sobic.007G156700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
7 Sobic.006G230900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
8 Sobic.009G184000 ICE-like protease p20 domain containing protein, putative, expressed -
9 Sobic.007G213800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EF hand family protein, putative, expressed -
10 Sobic.003G313800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytokinin dehydrogenase precursor, putative, expressed K00279: cytokinin dehydrogenase
11 Sobic.002G189100 beta-glucan-binding protein 4, putative, expressed K01180: endo-1,3(4)-beta-glucanase
12 Sobic.004G306300 expressed protein -
13 Sobic.006G231200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
14 Sobic.001G459800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase
15 Sobic.003G362700 cytochrome P450, putative, expressed -
16 Sobic.010G198600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.003G228900 cytochrome P450 72A1, putative, expressed -
18 Sobic.001G437000 ACT domain containing protein, expressed -
19 Sobic.006G253801 - K14488: SAUR family protein
20 Sobic.003G432700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@secreted glycoprotein, putative, expressed -


Gene co-expression network
sample Sobic006G137500 Sobic006G137500 Sobic003G146400 Sobic003G146400 Sobic006G137500--Sobic003G146400 Sobic001G076800 Sobic001G076800 Sobic006G137500--Sobic001G076800 Sobic007G192300 Sobic007G192300 Sobic006G137500--Sobic007G192300 Sobic009G148100 Sobic009G148100 Sobic006G137500--Sobic009G148100 Sobic009G179500 Sobic009G179500 Sobic006G137500--Sobic009G179500 Sobic007G156700 Sobic007G156700 Sobic006G137500--Sobic007G156700 Sobic006G230900 Sobic006G230900 Sobic006G137500--Sobic006G230900 Sobic009G184000 Sobic009G184000 Sobic006G137500--Sobic009G184000 Sobic007G213800 Sobic007G213800 Sobic006G137500--Sobic007G213800 Sobic003G146400--Sobic009G179500 Sobic003G146400--Sobic009G184000 Sobic004G306300 Sobic004G306300 Sobic003G146400--Sobic004G306300 Sobic007G074200 Sobic007G074200 Sobic003G146400--Sobic007G074200 Sobic003G432700 Sobic003G432700 Sobic003G146400--Sobic003G432700 Sobic006G007900 Sobic006G007900 Sobic003G146400--Sobic006G007900 Sobic006G158200 Sobic006G158200 Sobic003G146400--Sobic006G158200 Sobic001G079300 Sobic001G079300 Sobic003G146400--Sobic001G079300 Sobic006G235100 Sobic006G235100 Sobic003G146400--Sobic006G235100 Sobic005G011300 Sobic005G011300 Sobic001G076800--Sobic005G011300 Sobic001G502400 Sobic001G502400 Sobic001G076800--Sobic001G502400 Sobic002G188900 Sobic002G188900 Sobic001G076800--Sobic002G188900 Sobic004G141200 Sobic004G141200 Sobic001G076800--Sobic004G141200 Sobic005G107900 Sobic005G107900 Sobic001G076800--Sobic005G107900 Sobic004G100700 Sobic004G100700 Sobic001G076800--Sobic004G100700 Sobic001G313600 Sobic001G313600 Sobic001G076800--Sobic001G313600 Sobic001G076800--Sobic003G432700 Sobic003G382800 Sobic003G382800 Sobic001G076800--Sobic003G382800 Sobic003G160700 Sobic003G160700 Sobic007G192300--Sobic003G160700 Sobic001G322200 Sobic001G322200 Sobic007G192300--Sobic001G322200 Sobic009G248500 Sobic009G248500 Sobic007G192300--Sobic009G248500 Sobic003G037800 Sobic003G037800 Sobic007G192300--Sobic003G037800 Sobic002G393400 Sobic002G393400 Sobic007G192300--Sobic002G393400 Sobic003G078200 Sobic003G078200 Sobic007G192300--Sobic003G078200 Sobic003G228900 Sobic003G228900 Sobic007G192300--Sobic003G228900 Sobic004G345500 Sobic004G345500 Sobic007G192300--Sobic004G345500 Sobic009G027900 Sobic009G027900 Sobic007G192300--Sobic009G027900 Sobic006G190100 Sobic006G190100 Sobic009G148100--Sobic006G190100 Sobic010G198600 Sobic010G198600 Sobic009G148100--Sobic010G198600 Sobic001G105900 Sobic001G105900 Sobic009G148100--Sobic001G105900 Sobic006G190500 Sobic006G190500 Sobic009G148100--Sobic006G190500 Sobic001G076100 Sobic001G076100 Sobic009G148100--Sobic001G076100 Sobic001G443800 Sobic001G443800 Sobic009G148100--Sobic001G443800 Sobic002G389000 Sobic002G389000 Sobic009G148100--Sobic002G389000 Sobic004G088300 Sobic004G088300 Sobic009G148100--Sobic004G088300 Sobic002G291900 Sobic002G291900 Sobic009G148100--Sobic002G291900 Sobic003G313800 Sobic003G313800 Sobic009G179500--Sobic003G313800 Sobic009G179500--Sobic004G306300 Sobic001G138600 Sobic001G138600 Sobic009G179500--Sobic001G138600 Sobic009G179500--Sobic007G213800 Sobic009G179500--Sobic006G190100 Sobic001G459800 Sobic001G459800 Sobic009G179500--Sobic001G459800 Sobic003G148600 Sobic003G148600 Sobic009G179500--Sobic003G148600 Sobic004G065500 Sobic004G065500 Sobic009G179500--Sobic004G065500 Sobic009G183300 Sobic009G183300 Sobic009G179500--Sobic009G183300 Sobic004G308900 Sobic004G308900 Sobic007G156700--Sobic004G308900 Sobic002G358300 Sobic002G358300 Sobic007G156700--Sobic002G358300 Sobic007G122800 Sobic007G122800 Sobic007G156700--Sobic007G122800 Sobic003G323201 Sobic003G323201 Sobic007G156700--Sobic003G323201 Sobic002G269100 Sobic002G269100 Sobic007G156700--Sobic002G269100 Sobic004G169200 Sobic004G169200 Sobic007G156700--Sobic004G169200 Sobic004G191400 Sobic004G191400 Sobic007G156700--Sobic004G191400 Sobic004G246600 Sobic004G246600 Sobic007G156700--Sobic004G246600 Sobic001G195200 Sobic001G195200 Sobic007G156700--Sobic001G195200 Sobic006G231200 Sobic006G231200 Sobic006G230900--Sobic006G231200 Sobic006G231100 Sobic006G231100 Sobic006G230900--Sobic006G231100 Sobic002G282300 Sobic002G282300 Sobic006G230900--Sobic002G282300 Sobic006G230900--Sobic007G213800 Sobic010G217800 Sobic010G217800 Sobic006G230900--Sobic010G217800 Sobic002G415600 Sobic002G415600 Sobic006G230900--Sobic002G415600 Sobic003G144700 Sobic003G144700 Sobic006G230900--Sobic003G144700 Sobic003G123600 Sobic003G123600 Sobic006G230900--Sobic003G123600 Sobic003G197200 Sobic003G197200 Sobic006G230900--Sobic003G197200 Sobic001G112200 Sobic001G112200 Sobic009G184000--Sobic001G112200 Sobic007G169700 Sobic007G169700 Sobic009G184000--Sobic007G169700 Sobic009G184000--Sobic006G235100 Sobic009G184000--Sobic001G502400 Sobic009G184000--Sobic003G228900 Sobic009G184000--Sobic003G432700 Sobic009G184000--Sobic001G138600 Sobic008G066401 Sobic008G066401 Sobic009G184000--Sobic008G066401 Sobic002G189100 Sobic002G189100 Sobic009G184000--Sobic002G189100 Sobic007G213800--Sobic003G144700 Sobic001G391500 Sobic001G391500 Sobic007G213800--Sobic001G391500 Sobic007G213800--Sobic002G282300 Sobic007G213800--Sobic006G230900 Sobic007G213800--Sobic003G197200 Sobic007G213800--Sobic001G138600 Sobic007G213800--Sobic006G231200 Sobic010G209200 Sobic010G209200 Sobic007G213800--Sobic010G209200 Sobic007G213800--Sobic001G459800
Octagon: transcription factors


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