Gene annotation
Transcriptome id Sobic.006G253801.1
Synonym -
Functional annotation -
UniProt A0A1Z5RFI5
Pfam PF02519
Panther DB PTHR31374 PTHR31374:SF12
NCBI CDD -
KEGG Orthology K14488; SAUR family protein
Gene Ontology GO:0009733; response to auxin


Orthologs (automatic annotation)
TAIR AT4G34750 : SAUR-like auxin-responsive protein family
RAP-DB (Rice) LOC_Os04g56690.1 : OsSAUR23 - Auxin-responsive SAUR gene family member, expressed
MaizeGDB (Corn) Zm00025a009428 , Zm00025a009425 , Zm00025a057300 , Zm00025a012403
Brachypodium KQJ85128
Barley HORVU2Hr1G110170.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G142300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
2 Sobic.002G282300 expressed protein -
3 Sobic.001G205350 - -
4 Sobic.006G230900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
5 Sobic.006G194100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF581 domain containing protein, expressed -
6 Sobic.001G338600 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@DUF260 domain containing protein, putative, expressed -
7 Sobic.009G192600 Protein tyrosine/DOPA decarboxylase 1 (Os)(PubMedID : 27208977)@decarboxylase, putative, expressed K01592: tyrosine decarboxylase
8 Sobic.001G443800 glutamate decarboxylase, putative, expressed K01580: E4.1.1.15, gadB, gadA, glutamate decarboxylase
9 Sobic.007G213800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EF hand family protein, putative, expressed -
10 Sobic.006G231100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
11 Sobic.002G189100 beta-glucan-binding protein 4, putative, expressed K01180: endo-1,3(4)-beta-glucanase
12 Sobic.003G313800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytokinin dehydrogenase precursor, putative, expressed K00279: cytokinin dehydrogenase
13 Sobic.006G205600 glycosyl hydrolases family 16, putative, expressed -
14 Sobic.003G146400 anther-specific protein SF18 precursor, putative, expressed -
15 Sobic.006G231200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@wound induced protein, putative, expressed -
16 Sobic.010G234700 expressed protein -
17 Sobic.010G198500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.002G415600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@transcription factor(PubMedID : 30367619)@AP2 domain containing protein, expressed K09286: EREBP-like factor
19 Sobic.005G037000 cytochrome P450, putative, expressed -
20 Sobic.006G165100 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -


Gene co-expression network
sample Sobic006G253801 Sobic006G253801 Sobic003G142300 Sobic003G142300 Sobic006G253801--Sobic003G142300 Sobic002G282300 Sobic002G282300 Sobic006G253801--Sobic002G282300 Sobic001G205350 Sobic001G205350 Sobic006G253801--Sobic001G205350 Sobic006G230900 Sobic006G230900 Sobic006G253801--Sobic006G230900 Sobic006G194100 Sobic006G194100 Sobic006G253801--Sobic006G194100 Sobic001G338600 Sobic001G338600 Sobic006G253801--Sobic001G338600 Sobic009G192600 Sobic009G192600 Sobic006G253801--Sobic009G192600 Sobic001G443800 Sobic001G443800 Sobic006G253801--Sobic001G443800 Sobic007G213800 Sobic007G213800 Sobic006G253801--Sobic007G213800 Sobic002G189100 Sobic002G189100 Sobic003G142300--Sobic002G189100 Sobic003G142300--Sobic009G192600 Sobic003G362700 Sobic003G362700 Sobic003G142300--Sobic003G362700 Sobic001G259400 Sobic001G259400 Sobic003G142300--Sobic001G259400 Sobic006G101100 Sobic006G101100 Sobic003G142300--Sobic006G101100 Sobic004G064500 Sobic004G064500 Sobic003G142300--Sobic004G064500 Sobic003G313800 Sobic003G313800 Sobic003G142300--Sobic003G313800 Sobic001G259600 Sobic001G259600 Sobic003G142300--Sobic001G259600 Sobic008G066401 Sobic008G066401 Sobic003G142300--Sobic008G066401 Sobic002G282300--Sobic006G230900 Sobic002G282300--Sobic007G213800 Sobic002G282300--Sobic001G205350 Sobic002G282300--Sobic001G338600 Sobic003G144700 Sobic003G144700 Sobic002G282300--Sobic003G144700 Sobic003G197200 Sobic003G197200 Sobic002G282300--Sobic003G197200 Sobic006G231200 Sobic006G231200 Sobic002G282300--Sobic006G231200 Sobic001G320900 Sobic001G320900 Sobic002G282300--Sobic001G320900 Sobic004G169200 Sobic004G169200 Sobic002G282300--Sobic004G169200 Sobic001G205350--Sobic002G282300 Sobic001G205350--Sobic006G230900 Sobic001G205350--Sobic007G213800 Sobic001G205350--Sobic004G169200 Sobic001G205350--Sobic001G338600 Sobic001G205350--Sobic006G231200 Sobic001G205350--Sobic002G189100 Sobic003G380900 Sobic003G380900 Sobic001G205350--Sobic003G380900 Sobic003G428700 Sobic003G428700 Sobic001G205350--Sobic003G428700 Sobic006G230900--Sobic006G231200 Sobic006G231100 Sobic006G231100 Sobic006G230900--Sobic006G231100 Sobic006G230900--Sobic002G282300 Sobic006G230900--Sobic007G213800 Sobic010G217800 Sobic010G217800 Sobic006G230900--Sobic010G217800 Sobic002G415600 Sobic002G415600 Sobic006G230900--Sobic002G415600 Sobic006G230900--Sobic003G144700 Sobic003G123600 Sobic003G123600 Sobic006G230900--Sobic003G123600 Sobic006G230900--Sobic003G197200 Sobic006G194100--Sobic006G231100 Sobic008G177800 Sobic008G177800 Sobic006G194100--Sobic008G177800 Sobic004G286600 Sobic004G286600 Sobic006G194100--Sobic004G286600 Sobic006G194100--Sobic006G230900 Sobic007G057100 Sobic007G057100 Sobic006G194100--Sobic007G057100 Sobic004G280900 Sobic004G280900 Sobic006G194100--Sobic004G280900 Sobic002G294700 Sobic002G294700 Sobic006G194100--Sobic002G294700 Sobic004G257300 Sobic004G257300 Sobic006G194100--Sobic004G257300 Sobic006G194100--Sobic001G205350 Sobic001G338600--Sobic002G282300 Sobic002G278500 Sobic002G278500 Sobic001G338600--Sobic002G278500 Sobic004G228900 Sobic004G228900 Sobic001G338600--Sobic004G228900 Sobic001G426000 Sobic001G426000 Sobic001G338600--Sobic001G426000 Sobic001G338600--Sobic001G205350 Sobic001G338600--Sobic006G230900 Sobic001G338600--Sobic003G144700 Sobic001G441100 Sobic001G441100 Sobic001G338600--Sobic001G441100 Sobic004G283500 Sobic004G283500 Sobic001G338600--Sobic004G283500 Sobic009G192600--Sobic002G189100 Sobic009G192600--Sobic004G064500 Sobic009G192600--Sobic003G142300 Sobic009G192600--Sobic006G101100 Sobic004G191400 Sobic004G191400 Sobic009G192600--Sobic004G191400 Sobic009G192600--Sobic003G428700 Sobic001G259900 Sobic001G259900 Sobic009G192600--Sobic001G259900 Sobic001G267600 Sobic001G267600 Sobic009G192600--Sobic001G267600 Sobic003G093000 Sobic003G093000 Sobic009G192600--Sobic003G093000 Sobic001G443800--Sobic003G197200 Sobic001G201200 Sobic001G201200 Sobic001G443800--Sobic001G201200 Sobic001G076100 Sobic001G076100 Sobic001G443800--Sobic001G076100 Sobic003G148600 Sobic003G148600 Sobic001G443800--Sobic003G148600 Sobic001G371800 Sobic001G371800 Sobic001G443800--Sobic001G371800 Sobic010G198500 Sobic010G198500 Sobic001G443800--Sobic010G198500 Sobic001G443800--Sobic003G123600 Sobic007G214600 Sobic007G214600 Sobic001G443800--Sobic007G214600 Sobic006G190100 Sobic006G190100 Sobic001G443800--Sobic006G190100 Sobic007G213800--Sobic003G144700 Sobic001G391500 Sobic001G391500 Sobic007G213800--Sobic001G391500 Sobic007G213800--Sobic002G282300 Sobic007G213800--Sobic006G230900 Sobic007G213800--Sobic003G197200 Sobic001G138600 Sobic001G138600 Sobic007G213800--Sobic001G138600 Sobic007G213800--Sobic006G231200 Sobic010G209200 Sobic010G209200 Sobic007G213800--Sobic010G209200 Sobic001G459800 Sobic001G459800 Sobic007G213800--Sobic001G459800
Octagon: transcription factors


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