Gene annotation
Transcriptome id Sobic.003G012600.3,Sobic.003G012600.2
Synonym Sb03g001280, PDV1
Functional annotation expressed protein
UniProt A0A1W0VVB8 , A0A1W0VVB7
Pfam -
Panther DB PTHR33600 PTHR33600:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G53280 : plastid division1
RAP-DB (Rice) LOC_Os01g12460.1 : expressed protein
MaizeGDB (Corn) Zm00025a035952 , Zm00025a032991
Brachypodium KQK03361
Barley HORVU3Hr1G030360.3 , HORVU3Hr1G030360.2 , HORVU3Hr1G030360.1 , HORVU7Hr1G080820.2
Wheat TraesCS3B02G176400 , TraesCS3A02G149100 , TraesCS3D02G157200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G088600 expressed protein -
2 Sobic.001G162000 prefoldin subunit, putative, expressed K09550: prefoldin subunit 4
3 Sobic.003G227200 mitochondrial import receptor subunit TOM7-1, putative, expressed K17771: mitochondrial import receptor subunit TOM7
4 Sobic.007G073600 expressed protein K16585: HAUS augmin-like complex subunit 2
5 Sobic.003G108200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.010G095600 RING-H2 finger protein, putative, expressed -
7 Sobic.001G525400 receptor-like protein kinase At3g46290 precursor, putative, expressed -
8 Sobic.004G257300 GPI-anchored protein, putative, expressed -
9 Sobic.004G123000 expressed protein -
10 Sobic.004G107600 prefoldin subunit, putative, expressed K04798: pfdB, prefoldin beta subunit
11 Sobic.002G022400 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
12 Sobic.006G131400 expressed protein -
13 Sobic.009G171100 prenylated rab acceptor, putative, expressed -
14 Sobic.001G437000 ACT domain containing protein, expressed -
15 Sobic.008G033400 powdery mildew resistant protein 5, putative, expressed -
16 Sobic.004G273200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 16, putative, expressed K08235: xyloglucan:xyloglucosyl transferase
17 Sobic.001G464900 "Ca ATPase, IIB type"(PubMedID : 22196357)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@calcium-transporting ATPase, plasma membrane-type, putative, expressed K01537: P-type Ca2+ transporter type 2C
18 Sobic.010G106200 signal recognition particle 9 kDa protein, putative, expressed K03109: signal recognition particle subunit SRP9
19 Sobic.008G033300 sodium/calcium exchanger protein, putative, expressed K13754: SLC24A6, solute carrier family 24 (sodium/potassium/calcium exchanger), member 6
20 Sobic.006G258400 OsFBX153 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic003G012600 Sobic003G012600 Sobic008G088600 Sobic008G088600 Sobic003G012600--Sobic008G088600 Sobic001G162000 Sobic001G162000 Sobic003G012600--Sobic001G162000 Sobic003G227200 Sobic003G227200 Sobic003G012600--Sobic003G227200 Sobic007G073600 Sobic007G073600 Sobic003G012600--Sobic007G073600 Sobic003G108200 Sobic003G108200 Sobic003G012600--Sobic003G108200 Sobic010G095600 Sobic010G095600 Sobic003G012600--Sobic010G095600 Sobic001G525400 Sobic001G525400 Sobic003G012600--Sobic001G525400 Sobic004G257300 Sobic004G257300 Sobic003G012600--Sobic004G257300 Sobic004G123000 Sobic004G123000 Sobic003G012600--Sobic004G123000 Sobic008G088600--Sobic003G227200 Sobic009G068000 Sobic009G068000 Sobic008G088600--Sobic009G068000 Sobic003G358300 Sobic003G358300 Sobic008G088600--Sobic003G358300 Sobic010G106200 Sobic010G106200 Sobic008G088600--Sobic010G106200 Sobic008G088600--Sobic007G073600 Sobic008G088600--Sobic003G012600 Sobic005G091700 Sobic005G091700 Sobic008G088600--Sobic005G091700 Sobic006G231700 Sobic006G231700 Sobic008G088600--Sobic006G231700 Sobic001G216701 Sobic001G216701 Sobic008G088600--Sobic001G216701 Sobic004G107600 Sobic004G107600 Sobic001G162000--Sobic004G107600 Sobic006G256500 Sobic006G256500 Sobic001G162000--Sobic006G256500 Sobic002G022400 Sobic002G022400 Sobic001G162000--Sobic002G022400 Sobic002G068300 Sobic002G068300 Sobic001G162000--Sobic002G068300 Sobic006G220700 Sobic006G220700 Sobic001G162000--Sobic006G220700 Sobic001G331900 Sobic001G331900 Sobic001G162000--Sobic001G331900 Sobic003G115800 Sobic003G115800 Sobic001G162000--Sobic003G115800 Sobic003G249800 Sobic003G249800 Sobic001G162000--Sobic003G249800 Sobic008G161000 Sobic008G161000 Sobic001G162000--Sobic008G161000 Sobic003G227200--Sobic008G088600 Sobic004G012800 Sobic004G012800 Sobic003G227200--Sobic004G012800 Sobic003G253500 Sobic003G253500 Sobic003G227200--Sobic003G253500 Sobic009G191600 Sobic009G191600 Sobic003G227200--Sobic009G191600 Sobic006G099800 Sobic006G099800 Sobic003G227200--Sobic006G099800 Sobic009G171100 Sobic009G171100 Sobic003G227200--Sobic009G171100 Sobic001G441000 Sobic001G441000 Sobic003G227200--Sobic001G441000 Sobic001G148700 Sobic001G148700 Sobic003G227200--Sobic001G148700 Sobic010G201388 Sobic010G201388 Sobic003G227200--Sobic010G201388 Sobic007G073600--Sobic004G123000 Sobic001G402600 Sobic001G402600 Sobic007G073600--Sobic001G402600 Sobic007G073600--Sobic003G358300 Sobic007G192100 Sobic007G192100 Sobic007G073600--Sobic007G192100 Sobic009G164700 Sobic009G164700 Sobic007G073600--Sobic009G164700 Sobic009G054000 Sobic009G054000 Sobic007G073600--Sobic009G054000 Sobic001G013200 Sobic001G013200 Sobic007G073600--Sobic001G013200 Sobic001G035400 Sobic001G035400 Sobic007G073600--Sobic001G035400 Sobic006G203900 Sobic006G203900 Sobic007G073600--Sobic006G203900 Sobic010G238800 Sobic010G238800 Sobic003G108200--Sobic010G238800 Sobic010G225100 Sobic010G225100 Sobic003G108200--Sobic010G225100 Sobic001G526200 Sobic001G526200 Sobic003G108200--Sobic001G526200 Sobic002G272900 Sobic002G272900 Sobic003G108200--Sobic002G272900 Sobic004G325700 Sobic004G325700 Sobic003G108200--Sobic004G325700 Sobic003G108200--Sobic008G161000 Sobic003G108200--Sobic004G257300 Sobic004G152400 Sobic004G152400 Sobic003G108200--Sobic004G152400 Sobic009G065000 Sobic009G065000 Sobic003G108200--Sobic009G065000 Sobic003G357300 Sobic003G357300 Sobic010G095600--Sobic003G357300 Sobic010G095600--Sobic001G162000 Sobic004G271400 Sobic004G271400 Sobic010G095600--Sobic004G271400 Sobic001G389400 Sobic001G389400 Sobic010G095600--Sobic001G389400 Sobic003G344600 Sobic003G344600 Sobic010G095600--Sobic003G344600 Sobic007G018300 Sobic007G018300 Sobic010G095600--Sobic007G018300 Sobic003G322400 Sobic003G322400 Sobic010G095600--Sobic003G322400 Sobic010G257100 Sobic010G257100 Sobic010G095600--Sobic010G257100 Sobic009G050300 Sobic009G050300 Sobic010G095600--Sobic009G050300 Sobic001G525400--Sobic009G171100 Sobic001G525400--Sobic003G253500 Sobic002G353400 Sobic002G353400 Sobic001G525400--Sobic002G353400 Sobic007G188100 Sobic007G188100 Sobic001G525400--Sobic007G188100 Sobic001G370600 Sobic001G370600 Sobic001G525400--Sobic001G370600 Sobic002G330300 Sobic002G330300 Sobic001G525400--Sobic002G330300 Sobic007G011000 Sobic007G011000 Sobic001G525400--Sobic007G011000 Sobic003G338900 Sobic003G338900 Sobic001G525400--Sobic003G338900 Sobic003G392200 Sobic003G392200 Sobic001G525400--Sobic003G392200 Sobic001G173300 Sobic001G173300 Sobic004G257300--Sobic001G173300 Sobic010G030900 Sobic010G030900 Sobic004G257300--Sobic010G030900 Sobic009G208800 Sobic009G208800 Sobic004G257300--Sobic009G208800 Sobic002G294700 Sobic002G294700 Sobic004G257300--Sobic002G294700 Sobic008G177800 Sobic008G177800 Sobic004G257300--Sobic008G177800 Sobic004G036600 Sobic004G036600 Sobic004G257300--Sobic004G036600 Sobic006G205600 Sobic006G205600 Sobic004G257300--Sobic006G205600 Sobic004G286600 Sobic004G286600 Sobic004G257300--Sobic004G286600 Sobic001G489600 Sobic001G489600 Sobic004G257300--Sobic001G489600 Sobic004G123000--Sobic009G054000 Sobic006G239300 Sobic006G239300 Sobic004G123000--Sobic006G239300 Sobic001G350600 Sobic001G350600 Sobic004G123000--Sobic001G350600 Sobic003G209000 Sobic003G209000 Sobic004G123000--Sobic003G209000 Sobic002G296200 Sobic002G296200 Sobic004G123000--Sobic002G296200 Sobic006G013000 Sobic006G013000 Sobic004G123000--Sobic006G013000 Sobic003G155400 Sobic003G155400 Sobic004G123000--Sobic003G155400 Sobic004G159000 Sobic004G159000 Sobic004G123000--Sobic004G159000 Sobic001G404800 Sobic001G404800 Sobic004G123000--Sobic001G404800
Octagon: transcription factors


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