Gene annotation
Transcriptome id Sobic.010G097400.1
Synonym Sb10g008490
Functional annotation thiol-disulphide oxidoreductase DCC, putative, expressed
UniProt C5Z7H0
Pfam PF04134
Panther DB PTHR33639 PTHR33639:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G24095 : Putative thiol-disulphide oxidoreductase DCC
RAP-DB (Rice) LOC_Os06g13010.1 : retrotransposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a049426
Brachypodium KQK18808
Barley HORVU7Hr1G039500.8 , HORVU7Hr1G039500.9 , HORVU7Hr1G039500.1 , HORVU7Hr1G039500.2 , HORVU7Hr1G039500.3 , HORVU7Hr1G039500.4 , HORVU7Hr1G039500.5 , HORVU7Hr1G039500.6 , HORVU7Hr1G039500.7
Wheat TraesCS7D02G194600 , TraesCS7A02G193300 , TraesCS7B02G098600
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G177100 expressed protein K03671: thioredoxin 1
2 Sobic.009G235300 hhH-GPD superfamily base excision DNA repair protein, putative, expressed K01247: DNA-3-methyladenine glycosylase II
3 Sobic.004G109500 - -
4 Sobic.002G366700 expressed protein -
5 Sobic.003G284500 mediator of RNA polymerase II transcription subunit 22, putative, expressed K15139: mediator of RNA polymerase II transcription subunit 22
6 Sobic.003G128500 OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed -
7 Sobic.003G377200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
8 Sobic.001G150800 expressed protein -
9 Sobic.004G180600 expressed protein K18172: COX assembly mitochondrial protein 2
10 Sobic.002G339400 expressed protein -
11 Sobic.009G050100 ATKINESIN-13A/KINESIN-13A, putative, expressed K11091: U1 small nuclear ribonucleoprotein A
12 Sobic.007G076800 B3 DNA binding domain containing protein, expressed -
13 Sobic.002G038400 expressed protein -
14 Sobic.009G088401 - -
15 Sobic.001G494150 - -
16 Sobic.003G390300 expressed protein -
17 Sobic.001G513100 LYR motif containing protein, putative, expressed -
18 Sobic.001G062700 GATA zinc finger domain containing protein, expressed -
19 Sobic.006G075700 expressed protein -
20 Sobic.007G206700 lectin-like protein kinase, putative, expressed -


Gene co-expression network
sample Sobic010G097400 Sobic010G097400 Sobic006G177100 Sobic006G177100 Sobic010G097400--Sobic006G177100 Sobic009G235300 Sobic009G235300 Sobic010G097400--Sobic009G235300 Sobic004G109500 Sobic004G109500 Sobic010G097400--Sobic004G109500 Sobic002G366700 Sobic002G366700 Sobic010G097400--Sobic002G366700 Sobic003G284500 Sobic003G284500 Sobic010G097400--Sobic003G284500 Sobic003G128500 Sobic003G128500 Sobic010G097400--Sobic003G128500 Sobic003G377200 Sobic003G377200 Sobic010G097400--Sobic003G377200 Sobic001G150800 Sobic001G150800 Sobic010G097400--Sobic001G150800 Sobic004G180600 Sobic004G180600 Sobic010G097400--Sobic004G180600 Sobic006G177100--Sobic010G097400 Sobic002G339400 Sobic002G339400 Sobic006G177100--Sobic002G339400 Sobic004G288400 Sobic004G288400 Sobic006G177100--Sobic004G288400 Sobic006G177100--Sobic002G366700 Sobic010G014300 Sobic010G014300 Sobic006G177100--Sobic010G014300 Sobic009G050100 Sobic009G050100 Sobic006G177100--Sobic009G050100 Sobic001G494150 Sobic001G494150 Sobic006G177100--Sobic001G494150 Sobic006G177100--Sobic003G284500 Sobic006G258400 Sobic006G258400 Sobic006G177100--Sobic006G258400 Sobic009G235300--Sobic010G097400 Sobic009G235300--Sobic003G128500 Sobic009G088401 Sobic009G088401 Sobic009G235300--Sobic009G088401 Sobic009G235300--Sobic003G377200 Sobic009G235300--Sobic006G177100 Sobic009G235300--Sobic003G284500 Sobic003G390300 Sobic003G390300 Sobic009G235300--Sobic003G390300 Sobic009G235300--Sobic004G109500 Sobic001G062700 Sobic001G062700 Sobic009G235300--Sobic001G062700 Sobic004G109500--Sobic009G088401 Sobic007G072400 Sobic007G072400 Sobic004G109500--Sobic007G072400 Sobic004G109500--Sobic004G180600 Sobic004G043200 Sobic004G043200 Sobic004G109500--Sobic004G043200 Sobic007G016000 Sobic007G016000 Sobic004G109500--Sobic007G016000 Sobic007G158400 Sobic007G158400 Sobic004G109500--Sobic007G158400 Sobic005G076650 Sobic005G076650 Sobic004G109500--Sobic005G076650 Sobic004G061600 Sobic004G061600 Sobic004G109500--Sobic004G061600 Sobic004G107400 Sobic004G107400 Sobic004G109500--Sobic004G107400 Sobic002G366700--Sobic001G494150 Sobic002G366700--Sobic002G339400 Sobic010G087200 Sobic010G087200 Sobic002G366700--Sobic010G087200 Sobic006G075700 Sobic006G075700 Sobic002G366700--Sobic006G075700 Sobic002G058600 Sobic002G058600 Sobic002G366700--Sobic002G058600 Sobic001G513100 Sobic001G513100 Sobic002G366700--Sobic001G513100 Sobic010G259200 Sobic010G259200 Sobic002G366700--Sobic010G259200 Sobic010G119600 Sobic010G119600 Sobic002G366700--Sobic010G119600 Sobic001G428700 Sobic001G428700 Sobic002G366700--Sobic001G428700 Sobic003G284500--Sobic003G128500 Sobic003G284500--Sobic007G072400 Sobic003G284500--Sobic004G109500 Sobic003G284500--Sobic009G088401 Sobic003G284500--Sobic009G050100 Sobic002G173600 Sobic002G173600 Sobic003G284500--Sobic002G173600 Sobic003G284500--Sobic004G107400 Sobic003G284500--Sobic003G390300 Sobic010G152700 Sobic010G152700 Sobic003G284500--Sobic010G152700 Sobic003G128500--Sobic003G284500 Sobic010G267650 Sobic010G267650 Sobic003G128500--Sobic010G267650 Sobic003G359200 Sobic003G359200 Sobic003G128500--Sobic003G359200 Sobic003G128500--Sobic010G097400 Sobic003G128500--Sobic009G050100 Sobic010G040200 Sobic010G040200 Sobic003G128500--Sobic010G040200 Sobic003G128500--Sobic003G377200 Sobic003G148500 Sobic003G148500 Sobic003G128500--Sobic003G148500 Sobic003G128500--Sobic009G235300 Sobic001G267500 Sobic001G267500 Sobic003G377200--Sobic001G267500 Sobic007G208500 Sobic007G208500 Sobic003G377200--Sobic007G208500 Sobic006G186200 Sobic006G186200 Sobic003G377200--Sobic006G186200 Sobic006G163650 Sobic006G163650 Sobic003G377200--Sobic006G163650 Sobic003G377200--Sobic004G180600 Sobic003G377200--Sobic003G390300 Sobic009G203400 Sobic009G203400 Sobic003G377200--Sobic009G203400 Sobic003G377200--Sobic005G076650 Sobic004G156600 Sobic004G156600 Sobic003G377200--Sobic004G156600 Sobic001G150800--Sobic009G050100 Sobic001G150800--Sobic004G109500 Sobic001G150800--Sobic010G097400 Sobic001G157500 Sobic001G157500 Sobic001G150800--Sobic001G157500 Sobic001G150800--Sobic003G284500 Sobic001G150800--Sobic003G377200 Sobic001G150800--Sobic004G180600 Sobic001G150800--Sobic004G043200 Sobic006G255800 Sobic006G255800 Sobic001G150800--Sobic006G255800 Sobic006G273500 Sobic006G273500 Sobic004G180600--Sobic006G273500 Sobic008G098098 Sobic008G098098 Sobic004G180600--Sobic008G098098 Sobic004G180600--Sobic009G088401 Sobic004G180600--Sobic007G016000 Sobic008G119200 Sobic008G119200 Sobic004G180600--Sobic008G119200 Sobic004G180600--Sobic004G107400 Sobic003G407500 Sobic003G407500 Sobic004G180600--Sobic003G407500 Sobic004G180600--Sobic007G072400 Sobic005G209800 Sobic005G209800 Sobic004G180600--Sobic005G209800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.