Gene annotation
Transcriptome id Sobic.003G128500.1
Synonym Sb03g010880
Functional annotation OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed
UniProt A0A1B6Q2U8
Pfam PF00646 PF08387
Panther DB PTHR32212 PTHR32212:SF116
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G28410 : F-box/RNI-like superfamily protein
RAP-DB (Rice) LOC_Os08g09760.2 : OsFBX275 - F-box domain containing protein, expressed
MaizeGDB (Corn) Zm00025a023975 , Zm00025a027502
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G128500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G284500 mediator of RNA polymerase II transcription subunit 22, putative, expressed K15139: mediator of RNA polymerase II transcription subunit 22
2 Sobic.010G267650 - -
3 Sobic.003G359200 DUF740 domain containing protein, expressed -
4 Sobic.010G097400 thiol-disulphide oxidoreductase DCC, putative, expressed -
5 Sobic.009G050100 ATKINESIN-13A/KINESIN-13A, putative, expressed K11091: U1 small nuclear ribonucleoprotein A
6 Sobic.010G040200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family domain containing protein, expressed -
7 Sobic.003G377200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
8 Sobic.003G148500 endoglucanase, putative, expressed -
9 Sobic.009G235300 hhH-GPD superfamily base excision DNA repair protein, putative, expressed K01247: DNA-3-methyladenine glycosylase II
10 Sobic.005G076650 - -
11 Sobic.003G390300 expressed protein -
12 Sobic.001G062700 GATA zinc finger domain containing protein, expressed -
13 Sobic.002G403100 phosphatidylinositol-4-phosphate 5-kinase, putative, expressed K00889: 1-phosphatidylinositol-4-phosphate 5-kinase
14 Sobic.007G072400 phosphoribosyl transferase, putative, expressed -
15 Sobic.002G340350 - -
16 Sobic.006G169400 expressed protein -
17 Sobic.005G003900 phosphatidate cytidylyltransferase, putative, expressed K15892: farnesol kinase
18 Sobic.004G107400 expressed protein -
19 Sobic.006G177100 expressed protein K03671: thioredoxin 1
20 Sobic.004G109500 - -


Gene co-expression network
sample Sobic003G128500 Sobic003G128500 Sobic003G284500 Sobic003G284500 Sobic003G128500--Sobic003G284500 Sobic010G267650 Sobic010G267650 Sobic003G128500--Sobic010G267650 Sobic003G359200 Sobic003G359200 Sobic003G128500--Sobic003G359200 Sobic010G097400 Sobic010G097400 Sobic003G128500--Sobic010G097400 Sobic009G050100 Sobic009G050100 Sobic003G128500--Sobic009G050100 Sobic010G040200 Sobic010G040200 Sobic003G128500--Sobic010G040200 Sobic003G377200 Sobic003G377200 Sobic003G128500--Sobic003G377200 Sobic003G148500 Sobic003G148500 Sobic003G128500--Sobic003G148500 Sobic009G235300 Sobic009G235300 Sobic003G128500--Sobic009G235300 Sobic003G284500--Sobic003G128500 Sobic007G072400 Sobic007G072400 Sobic003G284500--Sobic007G072400 Sobic004G109500 Sobic004G109500 Sobic003G284500--Sobic004G109500 Sobic009G088401 Sobic009G088401 Sobic003G284500--Sobic009G088401 Sobic003G284500--Sobic009G050100 Sobic002G173600 Sobic002G173600 Sobic003G284500--Sobic002G173600 Sobic004G107400 Sobic004G107400 Sobic003G284500--Sobic004G107400 Sobic003G390300 Sobic003G390300 Sobic003G284500--Sobic003G390300 Sobic010G152700 Sobic010G152700 Sobic003G284500--Sobic010G152700 Sobic005G003900 Sobic005G003900 Sobic010G267650--Sobic005G003900 Sobic010G267650--Sobic003G128500 Sobic001G262500 Sobic001G262500 Sobic010G267650--Sobic001G262500 Sobic006G111500 Sobic006G111500 Sobic010G267650--Sobic006G111500 Sobic007G090448 Sobic007G090448 Sobic010G267650--Sobic007G090448 Sobic009G230400 Sobic009G230400 Sobic010G267650--Sobic009G230400 Sobic006G073001 Sobic006G073001 Sobic010G267650--Sobic006G073001 Sobic004G310700 Sobic004G310700 Sobic010G267650--Sobic004G310700 Sobic007G159800 Sobic007G159800 Sobic010G267650--Sobic007G159800 Sobic007G153300 Sobic007G153300 Sobic003G359200--Sobic007G153300 Sobic003G359200--Sobic004G107400 Sobic010G014900 Sobic010G014900 Sobic003G359200--Sobic010G014900 Sobic001G062700 Sobic001G062700 Sobic003G359200--Sobic001G062700 Sobic003G359200--Sobic003G390300 Sobic007G158400 Sobic007G158400 Sobic003G359200--Sobic007G158400 Sobic003G006500 Sobic003G006500 Sobic003G359200--Sobic003G006500 Sobic008G163800 Sobic008G163800 Sobic003G359200--Sobic008G163800 Sobic005G168500 Sobic005G168500 Sobic003G359200--Sobic005G168500 Sobic006G177100 Sobic006G177100 Sobic010G097400--Sobic006G177100 Sobic010G097400--Sobic009G235300 Sobic010G097400--Sobic004G109500 Sobic002G366700 Sobic002G366700 Sobic010G097400--Sobic002G366700 Sobic010G097400--Sobic003G284500 Sobic010G097400--Sobic003G128500 Sobic010G097400--Sobic003G377200 Sobic001G150800 Sobic001G150800 Sobic010G097400--Sobic001G150800 Sobic004G180600 Sobic004G180600 Sobic010G097400--Sobic004G180600 Sobic009G050100--Sobic003G284500 Sobic009G050100--Sobic001G150800 Sobic009G050100--Sobic003G128500 Sobic009G050100--Sobic006G177100 Sobic002G270100 Sobic002G270100 Sobic009G050100--Sobic002G270100 Sobic009G050100--Sobic010G097400 Sobic009G050100--Sobic003G377200 Sobic009G050100--Sobic003G148500 Sobic001G210700 Sobic001G210700 Sobic009G050100--Sobic001G210700 Sobic010G040200--Sobic003G128500 Sobic010G040200--Sobic010G267650 Sobic001G516200 Sobic001G516200 Sobic010G040200--Sobic001G516200 Sobic001G029900 Sobic001G029900 Sobic010G040200--Sobic001G029900 Sobic005G076650 Sobic005G076650 Sobic010G040200--Sobic005G076650 Sobic010G156800 Sobic010G156800 Sobic010G040200--Sobic010G156800 Sobic010G040200--Sobic006G111500 Sobic001G166800 Sobic001G166800 Sobic010G040200--Sobic001G166800 Sobic010G040200--Sobic003G284500 Sobic001G267500 Sobic001G267500 Sobic003G377200--Sobic001G267500 Sobic007G208500 Sobic007G208500 Sobic003G377200--Sobic007G208500 Sobic006G186200 Sobic006G186200 Sobic003G377200--Sobic006G186200 Sobic006G163650 Sobic006G163650 Sobic003G377200--Sobic006G163650 Sobic003G377200--Sobic004G180600 Sobic003G377200--Sobic003G390300 Sobic009G203400 Sobic009G203400 Sobic003G377200--Sobic009G203400 Sobic003G377200--Sobic005G076650 Sobic004G156600 Sobic004G156600 Sobic003G377200--Sobic004G156600 Sobic003G148500--Sobic001G062700 Sobic003G148500--Sobic006G186200 Sobic003G148500--Sobic003G390300 Sobic003G148500--Sobic003G359200 Sobic003G415500 Sobic003G415500 Sobic003G148500--Sobic003G415500 Sobic003G148500--Sobic004G107400 Sobic003G148500--Sobic004G156600 Sobic004G061600 Sobic004G061600 Sobic003G148500--Sobic004G061600 Sobic008G136900 Sobic008G136900 Sobic003G148500--Sobic008G136900 Sobic009G235300--Sobic010G097400 Sobic009G235300--Sobic003G128500 Sobic009G235300--Sobic009G088401 Sobic009G235300--Sobic003G377200 Sobic009G235300--Sobic006G177100 Sobic009G235300--Sobic003G284500 Sobic009G235300--Sobic003G390300 Sobic009G235300--Sobic004G109500 Sobic009G235300--Sobic001G062700
Octagon: transcription factors


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