Gene annotation
Transcriptome id Sobic.005G003900.1
Synonym Sb05g000470
Functional annotation phosphatidate cytidylyltransferase, putative, expressed
UniProt C5Y2Z3
Pfam -
Panther DB PTHR32523 PTHR32523:SF9
NCBI CDD KOG4453; Predicted ER membrane protein
KEGG Orthology K15892; farnesol kinase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G58560 : Phosphatidate cytidylyltransferase family protein
RAP-DB (Rice) LOC_Os11g01450.1 : phosphatidate cytidylyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a023780 , Zm00025a033268
Brachypodium -
Barley HORVU5Hr1G047890.4 , HORVU5Hr1G047890.2 , HORVU5Hr1G047890.8 , HORVU5Hr1G047890.1 , HORVU5Hr1G047890.3 , HORVU5Hr1G047890.5 , HORVU5Hr1G047890.7 , HORVU5Hr1G047890.6
Wheat TraesCS5D02G158400 , TraesCS5A02G153100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G267650 - -
2 Sobic.009G230400 cytokinin-N-glucosyltransferase 1, putative, expressed -
3 Sobic.006G073001 - -
4 Sobic.007G159800 DNA binding protein, putative, expressed -
5 Sobic.002G106100 OsFBD15 - F-box and FBD domain containing protein, expressed -
6 Sobic.006G210100 zinc finger domain, LSD1 subclass family protein, expressed -
7 Sobic.010G057400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
8 Sobic.003G259901 - -
9 Sobic.002G166500 protein phosphatase 2C, putative, expressed K17500: integrin-linked kinase-associated serine/threonine phosphatase 2C
10 Sobic.009G251300 endonuclease, putative, expressed -
11 Sobic.001G056300 BHLH transcription factor, putative, expressed -
12 Sobic.002G376800 EF hand family protein, putative -
13 Sobic.009G113600 - -
14 Sobic.006G111500 expressed protein -
15 Sobic.008G108900 GRF zinc finger family protein, expressed -
16 Sobic.007G217500 F-box protein At-B, putative, expressed -
17 Sobic.010G146200 homeobox associated leucine zipper, putative, expressed -
18 Sobic.006G132200 CHIT3 - Chitinase family protein precursor, expressed K01183: chitinase
19 Sobic.009G026400 - -
20 Sobic.004G123600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed K18213: proteinaceous RNase P


Gene co-expression network
sample Sobic005G003900 Sobic005G003900 Sobic010G267650 Sobic010G267650 Sobic005G003900--Sobic010G267650 Sobic009G230400 Sobic009G230400 Sobic005G003900--Sobic009G230400 Sobic006G073001 Sobic006G073001 Sobic005G003900--Sobic006G073001 Sobic007G159800 Sobic007G159800 Sobic005G003900--Sobic007G159800 Sobic002G106100 Sobic002G106100 Sobic005G003900--Sobic002G106100 Sobic006G210100 Sobic006G210100 Sobic005G003900--Sobic006G210100 Sobic010G057400 Sobic010G057400 Sobic005G003900--Sobic010G057400 Sobic003G259901 Sobic003G259901 Sobic005G003900--Sobic003G259901 Sobic002G166500 Sobic002G166500 Sobic005G003900--Sobic002G166500 Sobic010G267650--Sobic005G003900 Sobic003G128500 Sobic003G128500 Sobic010G267650--Sobic003G128500 Sobic001G262500 Sobic001G262500 Sobic010G267650--Sobic001G262500 Sobic006G111500 Sobic006G111500 Sobic010G267650--Sobic006G111500 Sobic007G090448 Sobic007G090448 Sobic010G267650--Sobic007G090448 Sobic010G267650--Sobic009G230400 Sobic010G267650--Sobic006G073001 Sobic004G310700 Sobic004G310700 Sobic010G267650--Sobic004G310700 Sobic010G267650--Sobic007G159800 Sobic009G230400--Sobic007G159800 Sobic009G230400--Sobic005G003900 Sobic001G056300 Sobic001G056300 Sobic009G230400--Sobic001G056300 Sobic009G230400--Sobic010G267650 Sobic003G296600 Sobic003G296600 Sobic009G230400--Sobic003G296600 Sobic002G253500 Sobic002G253500 Sobic009G230400--Sobic002G253500 Sobic007G156500 Sobic007G156500 Sobic009G230400--Sobic007G156500 Sobic002G376800 Sobic002G376800 Sobic009G230400--Sobic002G376800 Sobic002G108800 Sobic002G108800 Sobic009G230400--Sobic002G108800 Sobic006G073001--Sobic007G090448 Sobic006G073001--Sobic005G003900 Sobic006G122900 Sobic006G122900 Sobic006G073001--Sobic006G122900 Sobic006G073001--Sobic002G166500 Sobic006G073001--Sobic002G106100 Sobic006G073001--Sobic006G210100 Sobic006G073001--Sobic010G267650 Sobic009G251300 Sobic009G251300 Sobic006G073001--Sobic009G251300 Sobic004G123600 Sobic004G123600 Sobic006G073001--Sobic004G123600 Sobic001G038500 Sobic001G038500 Sobic007G159800--Sobic001G038500 Sobic007G159800--Sobic002G376800 Sobic003G057800 Sobic003G057800 Sobic007G159800--Sobic003G057800 Sobic007G159800--Sobic009G230400 Sobic006G204200 Sobic006G204200 Sobic007G159800--Sobic006G204200 Sobic008G105500 Sobic008G105500 Sobic007G159800--Sobic008G105500 Sobic007G159800--Sobic001G056300 Sobic008G163700 Sobic008G163700 Sobic007G159800--Sobic008G163700 Sobic010G092100 Sobic010G092100 Sobic007G159800--Sobic010G092100 Sobic002G106100--Sobic002G166500 Sobic002G106100--Sobic006G210100 Sobic001G303675 Sobic001G303675 Sobic002G106100--Sobic001G303675 Sobic003G307000 Sobic003G307000 Sobic002G106100--Sobic003G307000 Sobic001G371000 Sobic001G371000 Sobic002G106100--Sobic001G371000 Sobic006G076300 Sobic006G076300 Sobic002G106100--Sobic006G076300 Sobic001G360900 Sobic001G360900 Sobic002G106100--Sobic001G360900 Sobic005G015100 Sobic005G015100 Sobic002G106100--Sobic005G015100 Sobic003G163100 Sobic003G163100 Sobic002G106100--Sobic003G163100 Sobic006G210100--Sobic003G163100 Sobic006G210100--Sobic001G360900 Sobic006G210100--Sobic001G303675 Sobic006G246900 Sobic006G246900 Sobic006G210100--Sobic006G246900 Sobic006G210100--Sobic003G259901 Sobic002G144933 Sobic002G144933 Sobic006G210100--Sobic002G144933 Sobic006G145000 Sobic006G145000 Sobic006G210100--Sobic006G145000 Sobic002G151600 Sobic002G151600 Sobic006G210100--Sobic002G151600 Sobic004G211400 Sobic004G211400 Sobic006G210100--Sobic004G211400 Sobic004G345900 Sobic004G345900 Sobic010G057400--Sobic004G345900 Sobic010G057300 Sobic010G057300 Sobic010G057400--Sobic010G057300 Sobic005G085200 Sobic005G085200 Sobic010G057400--Sobic005G085200 Sobic004G199600 Sobic004G199600 Sobic010G057400--Sobic004G199600 Sobic010G270300 Sobic010G270300 Sobic010G057400--Sobic010G270300 Sobic007G189800 Sobic007G189800 Sobic010G057400--Sobic007G189800 Sobic001G277000 Sobic001G277000 Sobic010G057400--Sobic001G277000 Sobic010G146200 Sobic010G146200 Sobic010G057400--Sobic010G146200 Sobic009G078500 Sobic009G078500 Sobic010G057400--Sobic009G078500 Sobic003G259901--Sobic006G210100 Sobic003G259901--Sobic002G166500 Sobic005G077466 Sobic005G077466 Sobic003G259901--Sobic005G077466 Sobic006G209850 Sobic006G209850 Sobic003G259901--Sobic006G209850 Sobic003G259901--Sobic002G144933 Sobic009G065100 Sobic009G065100 Sobic003G259901--Sobic009G065100 Sobic006G128900 Sobic006G128900 Sobic003G259901--Sobic006G128900 Sobic001G274200 Sobic001G274200 Sobic003G259901--Sobic001G274200 Sobic003G259901--Sobic006G246900 Sobic006G080300 Sobic006G080300 Sobic002G166500--Sobic006G080300 Sobic002G166500--Sobic003G259901 Sobic002G166500--Sobic006G210100 Sobic002G166500--Sobic002G106100 Sobic008G116500 Sobic008G116500 Sobic002G166500--Sobic008G116500 Sobic002G157000 Sobic002G157000 Sobic002G166500--Sobic002G157000 Sobic007G217500 Sobic007G217500 Sobic002G166500--Sobic007G217500 Sobic001G206100 Sobic001G206100 Sobic002G166500--Sobic001G206100 Sobic001G257300 Sobic001G257300 Sobic002G166500--Sobic001G257300
Octagon: transcription factors


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