Gene annotation
Transcriptome id Sobic.002G166500.2,Sobic.002G166500.1
Synonym Sb02g021050
Functional annotation protein phosphatase 2C, putative, expressed
UniProt C5X947
Pfam PF00481
Panther DB PTHR13832 PTHR13832:SF355
NCBI CDD KOG0698; Serine/threonine protein phosphatase
KEGG Orthology K17500; integrin-linked kinase-associated serine/threonine phosphatase 2C
Gene Ontology GO:0003824; catalytic activity GO:0006470protein dephosphorylation GO:0004722protein serine/threonine phosphatase activity


Orthologs (automatic annotation)
TAIR AT1G18030 : Protein phosphatase 2C family protein
RAP-DB (Rice) LOC_Os09g14540.1 : protein phosphatase 2C, putative, expressed
MaizeGDB (Corn) Zm00025a046437
Brachypodium PNT64353 , KQJ89815
Barley HORVU5Hr1G055300.25 , HORVU5Hr1G055300.24 , HORVU5Hr1G055300.27 , HORVU5Hr1G055300.28 , HORVU5Hr1G055300.2 , HORVU5Hr1G055300.3 , HORVU5Hr1G055300.1 , HORVU5Hr1G055300.7 , HORVU5Hr1G055300.4 , HORVU5Hr1G055300.5 , HORVU5Hr1G055300.8 , HORVU5Hr1G055300.9 , HORVU5Hr1G055300.26 , HORVU5Hr1G055300.21 , HORVU5Hr1G055300.23 , HORVU5Hr1G055300.22 , HORVU5Hr1G055300.20 , HORVU5Hr1G055300.10 , HORVU5Hr1G055300.11 , HORVU5Hr1G055300.12 , HORVU5Hr1G055300.13 , HORVU5Hr1G055300.14 , HORVU5Hr1G055300.15 , HORVU5Hr1G055300.16 , HORVU5Hr1G055300.17 , HORVU5Hr1G055300.18 , HORVU5Hr1G055300.19
Wheat TraesCS5D02G185900 , TraesCS5D02G185900 , TraesCS5B02G179300 , TraesCS5B02G179300 , TraesCS5A02G181600
Populus -


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cDNA sequences
Sobic.002G166500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G080300 SET domain containing protein, expressed -
2 Sobic.003G259901 - -
3 Sobic.006G210100 zinc finger domain, LSD1 subclass family protein, expressed -
4 Sobic.002G106100 OsFBD15 - F-box and FBD domain containing protein, expressed -
5 Sobic.008G116500 plus-3 domain containing protein, expressed K15178: RNA polymerase-associated protein RTF1
6 Sobic.002G157000 enhancer of polycomb, putative, expressed K11322: enhancer of polycomb-like protein
7 Sobic.007G217500 F-box protein At-B, putative, expressed -
8 Sobic.001G206100 expressed protein -
9 Sobic.001G257300 OsFBL52 - F-box domain and LRR containing protein, expressed -
10 Sobic.001G423700 - K13171: SRRM1, serine/arginine repetitive matrix protein 1
11 Sobic.009G065100 splicing factor, putative, expressed K12850: pre-mRNA-splicing factor 38B
12 Sobic.008G093500 RNA recognition motif containing protein, putative, expressed K03248: translation initiation factor 3 subunit G
13 Sobic.006G013500 hydrolase/ zinc ion binding protein, putative, expressed K15442: TAD3, tRNA-specific adenosine deaminase 3
14 Sobic.004G213000 AT hook motif family protein, expressed -
15 Sobic.004G326400 ankyrin repeat-rich protein, putative, expressed K19044: E3 ubiquitin-protein ligase XBAT32/33
16 Sobic.008G173900 "OsPPKL3(Ortholog in rice:Zhan et al., 2012)"(PubMedID : 31659913)@serine/threonine-protein phosphatase BSL2, putative, expressed -
17 Sobic.002G144933 - -
18 Sobic.002G151600 R-interacting factor 1, putative, expressed -
19 Sobic.001G094000 expressed protein -
20 Sobic.001G477800 expressed protein -


Gene co-expression network
sample Sobic002G166500 Sobic002G166500 Sobic006G080300 Sobic006G080300 Sobic002G166500--Sobic006G080300 Sobic003G259901 Sobic003G259901 Sobic002G166500--Sobic003G259901 Sobic006G210100 Sobic006G210100 Sobic002G166500--Sobic006G210100 Sobic002G106100 Sobic002G106100 Sobic002G166500--Sobic002G106100 Sobic008G116500 Sobic008G116500 Sobic002G166500--Sobic008G116500 Sobic002G157000 Sobic002G157000 Sobic002G166500--Sobic002G157000 Sobic007G217500 Sobic007G217500 Sobic002G166500--Sobic007G217500 Sobic001G206100 Sobic001G206100 Sobic002G166500--Sobic001G206100 Sobic001G257300 Sobic001G257300 Sobic002G166500--Sobic001G257300 Sobic003G268300 Sobic003G268300 Sobic006G080300--Sobic003G268300 Sobic004G031700 Sobic004G031700 Sobic006G080300--Sobic004G031700 Sobic001G094000 Sobic001G094000 Sobic006G080300--Sobic001G094000 Sobic001G477800 Sobic001G477800 Sobic006G080300--Sobic001G477800 Sobic002G313300 Sobic002G313300 Sobic006G080300--Sobic002G313300 Sobic006G080300--Sobic001G206100 Sobic006G080300--Sobic002G157000 Sobic003G170100 Sobic003G170100 Sobic006G080300--Sobic003G170100 Sobic006G080300--Sobic001G257300 Sobic003G259901--Sobic006G210100 Sobic003G259901--Sobic002G166500 Sobic005G077466 Sobic005G077466 Sobic003G259901--Sobic005G077466 Sobic006G209850 Sobic006G209850 Sobic003G259901--Sobic006G209850 Sobic002G144933 Sobic002G144933 Sobic003G259901--Sobic002G144933 Sobic009G065100 Sobic009G065100 Sobic003G259901--Sobic009G065100 Sobic006G128900 Sobic006G128900 Sobic003G259901--Sobic006G128900 Sobic001G274200 Sobic001G274200 Sobic003G259901--Sobic001G274200 Sobic006G246900 Sobic006G246900 Sobic003G259901--Sobic006G246900 Sobic003G163100 Sobic003G163100 Sobic006G210100--Sobic003G163100 Sobic001G360900 Sobic001G360900 Sobic006G210100--Sobic001G360900 Sobic001G303675 Sobic001G303675 Sobic006G210100--Sobic001G303675 Sobic006G210100--Sobic006G246900 Sobic006G210100--Sobic003G259901 Sobic006G210100--Sobic002G144933 Sobic006G145000 Sobic006G145000 Sobic006G210100--Sobic006G145000 Sobic002G151600 Sobic002G151600 Sobic006G210100--Sobic002G151600 Sobic004G211400 Sobic004G211400 Sobic006G210100--Sobic004G211400 Sobic002G106100--Sobic002G166500 Sobic002G106100--Sobic006G210100 Sobic002G106100--Sobic001G303675 Sobic003G307000 Sobic003G307000 Sobic002G106100--Sobic003G307000 Sobic001G371000 Sobic001G371000 Sobic002G106100--Sobic001G371000 Sobic006G076300 Sobic006G076300 Sobic002G106100--Sobic006G076300 Sobic002G106100--Sobic001G360900 Sobic005G015100 Sobic005G015100 Sobic002G106100--Sobic005G015100 Sobic002G106100--Sobic003G163100 Sobic002G001600 Sobic002G001600 Sobic008G116500--Sobic002G001600 Sobic001G543900 Sobic001G543900 Sobic008G116500--Sobic001G543900 Sobic007G011400 Sobic007G011400 Sobic008G116500--Sobic007G011400 Sobic001G439500 Sobic001G439500 Sobic008G116500--Sobic001G439500 Sobic008G116500--Sobic006G080300 Sobic007G037100 Sobic007G037100 Sobic008G116500--Sobic007G037100 Sobic008G116500--Sobic002G313300 Sobic008G116500--Sobic001G477800 Sobic004G196700 Sobic004G196700 Sobic008G116500--Sobic004G196700 Sobic002G248400 Sobic002G248400 Sobic002G157000--Sobic002G248400 Sobic002G320500 Sobic002G320500 Sobic002G157000--Sobic002G320500 Sobic003G200200 Sobic003G200200 Sobic002G157000--Sobic003G200200 Sobic001G420200 Sobic001G420200 Sobic002G157000--Sobic001G420200 Sobic008G173900 Sobic008G173900 Sobic002G157000--Sobic008G173900 Sobic002G157000--Sobic003G268300 Sobic001G162300 Sobic001G162300 Sobic002G157000--Sobic001G162300 Sobic003G108700 Sobic003G108700 Sobic002G157000--Sobic003G108700 Sobic002G157000--Sobic001G094000 Sobic007G217500--Sobic006G080300 Sobic007G217500--Sobic002G313300 Sobic007G217500--Sobic001G257300 Sobic006G013500 Sobic006G013500 Sobic007G217500--Sobic006G013500 Sobic007G217500--Sobic001G543900 Sobic007G217500--Sobic002G166500 Sobic003G204000 Sobic003G204000 Sobic007G217500--Sobic003G204000 Sobic007G217500--Sobic002G001600 Sobic006G123900 Sobic006G123900 Sobic007G217500--Sobic006G123900 Sobic001G206100--Sobic001G257300 Sobic001G206100--Sobic006G013500 Sobic001G206100--Sobic002G320500 Sobic001G206100--Sobic006G080300 Sobic001G206100--Sobic002G157000 Sobic009G000500 Sobic009G000500 Sobic001G206100--Sobic009G000500 Sobic004G213000 Sobic004G213000 Sobic001G206100--Sobic004G213000 Sobic001G356500 Sobic001G356500 Sobic001G206100--Sobic001G356500 Sobic002G161000 Sobic002G161000 Sobic001G206100--Sobic002G161000 Sobic001G257300--Sobic001G206100 Sobic001G257300--Sobic006G013500 Sobic001G257300--Sobic003G170100 Sobic001G257300--Sobic006G080300 Sobic001G257300--Sobic003G200200 Sobic001G257300--Sobic002G001600 Sobic001G257300--Sobic004G213000 Sobic001G257300--Sobic002G161000 Sobic001G257300--Sobic001G162300
Octagon: transcription factors


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