Gene annotation
Transcriptome id Sobic.002G106100.1,Sobic.002G106100.2
Synonym Sb02g009070
Functional annotation OsFBD15 - F-box and FBD domain containing protein, expressed
UniProt A0A1B6QAI4 , C5X3K7
Pfam PF08387
Panther DB PTHR32212 PTHR32212:SF74
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G44950 : F-box/RNI-like/FBD-like domains-containing protein
RAP-DB (Rice) LOC_Os12g31340.1 : OsFBD15 - F-box and FBD domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS7B02G263400
Populus -


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cDNA sequences
Sobic.002G106100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G166500 protein phosphatase 2C, putative, expressed K17500: integrin-linked kinase-associated serine/threonine phosphatase 2C
2 Sobic.006G210100 zinc finger domain, LSD1 subclass family protein, expressed -
3 Sobic.001G303675 - -
4 Sobic.003G307000 RNA recognition motif containing protein, expressed K18667: activating signal cointegrator complex subunit 2
5 Sobic.001G371000 GTPase of unknown function domain containing protein, putative, expressed K14537: NUG2, nuclear GTP-binding protein
6 Sobic.006G076300 RING-H2 finger protein, putative, expressed K19040: E3 ubiquitin-protein ligase ATL10/75/76/77/78
7 Sobic.001G360900 peptidyl-prolyl isomerase PASTICCINO1, putative, expressed -
8 Sobic.005G015100 OsFBX291 - F-box domain containing protein, expressed -
9 Sobic.003G163100 expressed protein K08819: cyclin-dependent kinase 12/13
10 Sobic.009G065100 splicing factor, putative, expressed K12850: pre-mRNA-splicing factor 38B
11 Sobic.006G013500 hydrolase/ zinc ion binding protein, putative, expressed K15442: TAD3, tRNA-specific adenosine deaminase 3
12 Sobic.001G246500 GTPase of unknown function domain containing protein, putative, expressed -
13 Sobic.003G259901 - -
14 Sobic.001G454301 - -
15 Sobic.001G375300 ulp1 protease family protein, putative, expressed K08592: sentrin-specific protease 1
16 Sobic.001G306900 tetratricopeptide repeat domain containing protein, expressed K12600: SKI3, superkiller protein 3
17 Sobic.002G421700 OsFBX368 - F-box domain containing protein, expressed -
18 Sobic.002G051450 - -
19 Sobic.009G000500 pex14, putative, expressed K13343: peroxin-14
20 Sobic.006G080300 SET domain containing protein, expressed -


Gene co-expression network
sample Sobic002G106100 Sobic002G106100 Sobic002G166500 Sobic002G166500 Sobic002G106100--Sobic002G166500 Sobic006G210100 Sobic006G210100 Sobic002G106100--Sobic006G210100 Sobic001G303675 Sobic001G303675 Sobic002G106100--Sobic001G303675 Sobic003G307000 Sobic003G307000 Sobic002G106100--Sobic003G307000 Sobic001G371000 Sobic001G371000 Sobic002G106100--Sobic001G371000 Sobic006G076300 Sobic006G076300 Sobic002G106100--Sobic006G076300 Sobic001G360900 Sobic001G360900 Sobic002G106100--Sobic001G360900 Sobic005G015100 Sobic005G015100 Sobic002G106100--Sobic005G015100 Sobic003G163100 Sobic003G163100 Sobic002G106100--Sobic003G163100 Sobic006G080300 Sobic006G080300 Sobic002G166500--Sobic006G080300 Sobic003G259901 Sobic003G259901 Sobic002G166500--Sobic003G259901 Sobic002G166500--Sobic006G210100 Sobic002G166500--Sobic002G106100 Sobic008G116500 Sobic008G116500 Sobic002G166500--Sobic008G116500 Sobic002G157000 Sobic002G157000 Sobic002G166500--Sobic002G157000 Sobic007G217500 Sobic007G217500 Sobic002G166500--Sobic007G217500 Sobic001G206100 Sobic001G206100 Sobic002G166500--Sobic001G206100 Sobic001G257300 Sobic001G257300 Sobic002G166500--Sobic001G257300 Sobic006G210100--Sobic003G163100 Sobic006G210100--Sobic001G360900 Sobic006G210100--Sobic001G303675 Sobic006G246900 Sobic006G246900 Sobic006G210100--Sobic006G246900 Sobic006G210100--Sobic003G259901 Sobic002G144933 Sobic002G144933 Sobic006G210100--Sobic002G144933 Sobic006G145000 Sobic006G145000 Sobic006G210100--Sobic006G145000 Sobic002G151600 Sobic002G151600 Sobic006G210100--Sobic002G151600 Sobic004G211400 Sobic004G211400 Sobic006G210100--Sobic004G211400 Sobic001G306900 Sobic001G306900 Sobic001G303675--Sobic001G306900 Sobic001G094000 Sobic001G094000 Sobic001G303675--Sobic001G094000 Sobic001G303675--Sobic002G144933 Sobic009G100050 Sobic009G100050 Sobic001G303675--Sobic009G100050 Sobic005G015900 Sobic005G015900 Sobic001G303675--Sobic005G015900 Sobic002G320500 Sobic002G320500 Sobic001G303675--Sobic002G320500 Sobic004G096500 Sobic004G096500 Sobic001G303675--Sobic004G096500 Sobic001G303675--Sobic002G151600 Sobic003G170100 Sobic003G170100 Sobic001G303675--Sobic003G170100 Sobic007G000100 Sobic007G000100 Sobic003G307000--Sobic007G000100 Sobic002G153700 Sobic002G153700 Sobic003G307000--Sobic002G153700 Sobic003G445400 Sobic003G445400 Sobic003G307000--Sobic003G445400 Sobic009G000500 Sobic009G000500 Sobic003G307000--Sobic009G000500 Sobic001G511500 Sobic001G511500 Sobic003G307000--Sobic001G511500 Sobic003G307000--Sobic001G306900 Sobic004G031700 Sobic004G031700 Sobic003G307000--Sobic004G031700 Sobic003G394300 Sobic003G394300 Sobic003G307000--Sobic003G394300 Sobic010G065300 Sobic010G065300 Sobic003G307000--Sobic010G065300 Sobic002G362300 Sobic002G362300 Sobic001G371000--Sobic002G362300 Sobic005G009200 Sobic005G009200 Sobic001G371000--Sobic005G009200 Sobic004G026100 Sobic004G026100 Sobic001G371000--Sobic004G026100 Sobic003G239900 Sobic003G239900 Sobic001G371000--Sobic003G239900 Sobic009G216000 Sobic009G216000 Sobic001G371000--Sobic009G216000 Sobic009G151200 Sobic009G151200 Sobic001G371000--Sobic009G151200 Sobic009G022100 Sobic009G022100 Sobic001G371000--Sobic009G022100 Sobic003G442000 Sobic003G442000 Sobic001G371000--Sobic003G442000 Sobic008G117200 Sobic008G117200 Sobic001G371000--Sobic008G117200 Sobic002G144966 Sobic002G144966 Sobic006G076300--Sobic002G144966 Sobic006G076300--Sobic001G303675 Sobic009G065100 Sobic009G065100 Sobic006G076300--Sobic009G065100 Sobic006G013500 Sobic006G013500 Sobic006G076300--Sobic006G013500 Sobic002G259800 Sobic002G259800 Sobic006G076300--Sobic002G259800 Sobic006G076300--Sobic003G307000 Sobic001G454301 Sobic001G454301 Sobic006G076300--Sobic001G454301 Sobic006G076300--Sobic002G320500 Sobic006G076300--Sobic001G257300 Sobic001G360900--Sobic009G065100 Sobic005G084100 Sobic005G084100 Sobic001G360900--Sobic005G084100 Sobic001G360900--Sobic003G163100 Sobic007G054400 Sobic007G054400 Sobic001G360900--Sobic007G054400 Sobic001G253200 Sobic001G253200 Sobic001G360900--Sobic001G253200 Sobic008G011100 Sobic008G011100 Sobic001G360900--Sobic008G011100 Sobic001G360900--Sobic006G210100 Sobic004G018300 Sobic004G018300 Sobic001G360900--Sobic004G018300 Sobic004G084300 Sobic004G084300 Sobic001G360900--Sobic004G084300 Sobic002G051450 Sobic002G051450 Sobic005G015100--Sobic002G051450 Sobic008G034600 Sobic008G034600 Sobic005G015100--Sobic008G034600 Sobic002G158700 Sobic002G158700 Sobic005G015100--Sobic002G158700 Sobic001G464200 Sobic001G464200 Sobic005G015100--Sobic001G464200 Sobic006G128900 Sobic006G128900 Sobic005G015100--Sobic006G128900 Sobic005G015100--Sobic006G145000 Sobic002G421700 Sobic002G421700 Sobic005G015100--Sobic002G421700 Sobic004G271900 Sobic004G271900 Sobic005G015100--Sobic004G271900 Sobic004G256600 Sobic004G256600 Sobic005G015100--Sobic004G256600 Sobic003G163100--Sobic006G210100 Sobic003G163100--Sobic001G360900 Sobic003G163100--Sobic001G253200 Sobic003G163100--Sobic001G303675 Sobic009G251300 Sobic009G251300 Sobic003G163100--Sobic009G251300 Sobic006G191400 Sobic006G191400 Sobic003G163100--Sobic006G191400 Sobic003G163100--Sobic002G151600 Sobic003G185250 Sobic003G185250 Sobic003G163100--Sobic003G185250 Sobic009G045700 Sobic009G045700 Sobic003G163100--Sobic009G045700
Octagon: transcription factors


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