Gene annotation
Transcriptome id Sobic.008G093500.2,Sobic.008G093500.1,Sobic.008G093500.3
Synonym EIF3G1, ATEIF3G1, Sb08g013390
Functional annotation RNA recognition motif containing protein, putative, expressed
UniProt A0A1B6PCN8
Pfam PF12353
Panther DB PTHR10352
NCBI CDD -
KEGG Orthology K03248; translation initiation factor 3 subunit G
Gene Ontology GO:0005852; eukaryotic translation initiation factor 3 complex GO:0005737cytoplasm GO:0003743translation initiation factor activity


Orthologs (automatic annotation)
TAIR AT3G11400 : eukaryotic translation initiation factor 3G1
RAP-DB (Rice) LOC_Os02g54700.2 : RNA recognition motif containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a030222
Brachypodium KQK01073
Barley HORVU6Hr1G083650.1 , HORVU6Hr1G083650.2
Wheat TraesCS4B02G065700 , TraesCS4D02G064800 , TraesCS6D02G331000 , TraesCS6A02G348000 , TraesCS6B02G381600
Populus -


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cDNA sequences
Sobic.008G093500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G166500 protein phosphatase 2C, putative, expressed K17500: integrin-linked kinase-associated serine/threonine phosphatase 2C
2 Sobic.006G256100 SWIB/MDM2 domain containing protein, expressed K15223: UAF30, upstream activation factor subunit UAF30
3 Sobic.001G446900 arginyl-tRNA synthetase, putative, expressed -
4 Sobic.008G124700 splicing factor, arginine/serine-rich 18, putative, expressed -
5 Sobic.006G248700 AAA-type ATPase family protein, putative, expressed -
6 Sobic.001G133466 - -
7 Sobic.001G274200 RNA recognition motif containing protein, putative, expressed K11093: U1 small nuclear ribonucleoprotein 70kDa
8 Sobic.001G420200 RNA recognition motif containing protein, putative, expressed K11093: U1 small nuclear ribonucleoprotein 70kDa
9 Sobic.003G241800 - -
10 Sobic.010G004300 myb-like DNA-binding domain containing protein, expressed -
11 Sobic.005G144400 - -
12 Sobic.004G036900 Highest expression level in primordial inflorescence(PubMedID : 27501690)@OsSPL3 - SBP-box gene family member, expressed -
13 Sobic.001G504000 Citrate transporter protein, putative, expressed -
14 Sobic.007G096600 - -
15 Sobic.003G037900 ZOS3-23 - C2H2 zinc finger protein, expressed K12848: U4/U6.U5 tri-snRNP component SNU23
16 Sobic.005G110472 - -
17 Sobic.003G176500 - -
18 Sobic.006G082600 OsFBX133 - F-box domain containing protein, expressed K10295: F-box protein 9
19 Sobic.003G332800 GTPase-activating protein, putative, expressed -
20 Sobic.004G290800 GRAS family transcription factor(PubMedID : 23915383)@scarecrow, putative, expressed -


Gene co-expression network
sample Sobic008G093500 Sobic008G093500 Sobic002G166500 Sobic002G166500 Sobic008G093500--Sobic002G166500 Sobic006G256100 Sobic006G256100 Sobic008G093500--Sobic006G256100 Sobic001G446900 Sobic001G446900 Sobic008G093500--Sobic001G446900 Sobic008G124700 Sobic008G124700 Sobic008G093500--Sobic008G124700 Sobic006G248700 Sobic006G248700 Sobic008G093500--Sobic006G248700 Sobic001G133466 Sobic001G133466 Sobic008G093500--Sobic001G133466 Sobic001G274200 Sobic001G274200 Sobic008G093500--Sobic001G274200 Sobic001G420200 Sobic001G420200 Sobic008G093500--Sobic001G420200 Sobic003G241800 Sobic003G241800 Sobic008G093500--Sobic003G241800 Sobic006G080300 Sobic006G080300 Sobic002G166500--Sobic006G080300 Sobic003G259901 Sobic003G259901 Sobic002G166500--Sobic003G259901 Sobic006G210100 Sobic006G210100 Sobic002G166500--Sobic006G210100 Sobic002G106100 Sobic002G106100 Sobic002G166500--Sobic002G106100 Sobic008G116500 Sobic008G116500 Sobic002G166500--Sobic008G116500 Sobic002G157000 Sobic002G157000 Sobic002G166500--Sobic002G157000 Sobic007G217500 Sobic007G217500 Sobic002G166500--Sobic007G217500 Sobic001G206100 Sobic001G206100 Sobic002G166500--Sobic001G206100 Sobic001G257300 Sobic001G257300 Sobic002G166500--Sobic001G257300 Sobic001G504000 Sobic001G504000 Sobic006G256100--Sobic001G504000 Sobic001G306000 Sobic001G306000 Sobic006G256100--Sobic001G306000 Sobic009G137800 Sobic009G137800 Sobic006G256100--Sobic009G137800 Sobic001G451000 Sobic001G451000 Sobic006G256100--Sobic001G451000 Sobic009G161600 Sobic009G161600 Sobic006G256100--Sobic009G161600 Sobic006G256100--Sobic001G446900 Sobic007G158100 Sobic007G158100 Sobic006G256100--Sobic007G158100 Sobic003G333600 Sobic003G333600 Sobic006G256100--Sobic003G333600 Sobic001G284800 Sobic001G284800 Sobic006G256100--Sobic001G284800 Sobic007G178700 Sobic007G178700 Sobic001G446900--Sobic007G178700 Sobic009G127900 Sobic009G127900 Sobic001G446900--Sobic009G127900 Sobic006G082600 Sobic006G082600 Sobic001G446900--Sobic006G082600 Sobic004G290800 Sobic004G290800 Sobic001G446900--Sobic004G290800 Sobic003G268300 Sobic003G268300 Sobic001G446900--Sobic003G268300 Sobic007G137900 Sobic007G137900 Sobic001G446900--Sobic007G137900 Sobic010G026400 Sobic010G026400 Sobic001G446900--Sobic010G026400 Sobic009G104201 Sobic009G104201 Sobic001G446900--Sobic009G104201 Sobic001G111900 Sobic001G111900 Sobic001G446900--Sobic001G111900 Sobic010G101800 Sobic010G101800 Sobic008G124700--Sobic010G101800 Sobic001G124000 Sobic001G124000 Sobic008G124700--Sobic001G124000 Sobic007G167500 Sobic007G167500 Sobic008G124700--Sobic007G167500 Sobic001G107500 Sobic001G107500 Sobic008G124700--Sobic001G107500 Sobic006G200600 Sobic006G200600 Sobic008G124700--Sobic006G200600 Sobic003G184699 Sobic003G184699 Sobic008G124700--Sobic003G184699 Sobic001G016000 Sobic001G016000 Sobic008G124700--Sobic001G016000 Sobic006G133800 Sobic006G133800 Sobic008G124700--Sobic006G133800 Sobic009G210500 Sobic009G210500 Sobic008G124700--Sobic009G210500 Sobic004G123600 Sobic004G123600 Sobic006G248700--Sobic004G123600 Sobic001G381900 Sobic001G381900 Sobic006G248700--Sobic001G381900 Sobic001G316700 Sobic001G316700 Sobic006G248700--Sobic001G316700 Sobic003G028800 Sobic003G028800 Sobic006G248700--Sobic003G028800 Sobic006G248700--Sobic008G093500 Sobic003G211500 Sobic003G211500 Sobic006G248700--Sobic003G211500 Sobic003G037900 Sobic003G037900 Sobic006G248700--Sobic003G037900 Sobic004G310700 Sobic004G310700 Sobic006G248700--Sobic004G310700 Sobic007G062100 Sobic007G062100 Sobic006G248700--Sobic007G062100 Sobic001G133466--Sobic009G161600 Sobic001G133466--Sobic001G274200 Sobic007G096600 Sobic007G096600 Sobic001G133466--Sobic007G096600 Sobic001G133466--Sobic001G420200 Sobic008G173900 Sobic008G173900 Sobic001G133466--Sobic008G173900 Sobic001G133466--Sobic001G111900 Sobic010G123901 Sobic010G123901 Sobic001G133466--Sobic010G123901 Sobic002G243900 Sobic002G243900 Sobic001G133466--Sobic002G243900 Sobic003G176500 Sobic003G176500 Sobic001G133466--Sobic003G176500 Sobic001G274200--Sobic001G420200 Sobic001G274200--Sobic007G096600 Sobic001G274200--Sobic003G268300 Sobic001G274200--Sobic008G173900 Sobic002G144933 Sobic002G144933 Sobic001G274200--Sobic002G144933 Sobic001G274200--Sobic001G133466 Sobic007G037900 Sobic007G037900 Sobic001G274200--Sobic007G037900 Sobic001G274200--Sobic002G243900 Sobic001G274200--Sobic010G123901 Sobic001G420200--Sobic001G274200 Sobic001G420200--Sobic002G157000 Sobic001G420200--Sobic003G268300 Sobic001G420200--Sobic008G173900 Sobic002G248400 Sobic002G248400 Sobic001G420200--Sobic002G248400 Sobic001G420200--Sobic007G096600 Sobic001G420200--Sobic007G037900 Sobic001G420200--Sobic002G144933 Sobic001G420200--Sobic007G178700 Sobic007G000100 Sobic007G000100 Sobic003G241800--Sobic007G000100 Sobic003G119000 Sobic003G119000 Sobic003G241800--Sobic003G119000 Sobic007G117400 Sobic007G117400 Sobic003G241800--Sobic007G117400 Sobic007G126600 Sobic007G126600 Sobic003G241800--Sobic007G126600 Sobic004G065100 Sobic004G065100 Sobic003G241800--Sobic004G065100 Sobic007G161000 Sobic007G161000 Sobic003G241800--Sobic007G161000 Sobic004G039200 Sobic004G039200 Sobic003G241800--Sobic004G039200 Sobic005G207500 Sobic005G207500 Sobic003G241800--Sobic005G207500 Sobic007G065400 Sobic007G065400 Sobic003G241800--Sobic007G065400
Octagon: transcription factors


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