Gene annotation
Transcriptome id Sobic.007G217500.2
Synonym Sb07g028390
Functional annotation F-box protein At-B, putative, expressed
UniProt A0A1Z5RB44
Pfam -
Panther DB PTHR24006 PTHR24006:SF449
NCBI CDD KOG1947; Leucine rich repeat proteins, some proteins contain F-box
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G55590 : RNI-like superfamily protein
RAP-DB (Rice) LOC_Os08g39060.1 : F-box protein At-B, putative, expressed
MaizeGDB (Corn) Zm00025a033752
Brachypodium KQJ98821 , KQJ98820 , KQJ98822 , PNT68360 , PNT68353 , KQJ98818 , KQJ98819 , PNT68358 , PNT68359 , PNT68350 , PNT68351 , PNT68352 , PNT68354 , PNT68355 , PNT68356 , PNT68357 , PNT68349 , PNT68348 , PNT68347 , PNT68346 , PNT68345 , PNT68344
Barley HORVU7Hr1G049200.3 , HORVU7Hr1G049200.5 , HORVU7Hr1G049200.6
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G080300 SET domain containing protein, expressed -
2 Sobic.002G313300 bromodomain domain containing protein, expressed -
3 Sobic.001G257300 OsFBL52 - F-box domain and LRR containing protein, expressed -
4 Sobic.006G013500 hydrolase/ zinc ion binding protein, putative, expressed K15442: TAD3, tRNA-specific adenosine deaminase 3
5 Sobic.001G543900 H(+)-ATPase 7(PubMedID : 26320239)@E1-E2 ATPase domain containing protein, expressed K01535: PMA1, H+-transporting ATPase
6 Sobic.002G166500 protein phosphatase 2C, putative, expressed K17500: integrin-linked kinase-associated serine/threonine phosphatase 2C
7 Sobic.003G204000 expressed protein -
8 Sobic.002G001600 MBTB12 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
9 Sobic.006G123900 chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed -
10 Sobic.002G253500 FAD dependent oxidoreductase domain containing protein, expressed K00306: sarcosine oxidase / L-pipecolate oxidase
11 Sobic.001G477800 expressed protein -
12 Sobic.001G206100 expressed protein -
13 Sobic.002G151600 R-interacting factor 1, putative, expressed -
14 Sobic.008G117200 RING finger and CHY zinc finger domain-containing protein 1, putative, expressed K10144: RCHY1, RING finger and CHY zinc finger domain-containing protein 1
15 Sobic.006G039900 - -
16 Sobic.006G252000 - -
17 Sobic.007G116400 - -
18 Sobic.004G169501 - -
19 Sobic.007G037100 MYB family transcription factor, putative, expressed -
20 Sobic.002G330400 pentatricopeptide, putative, expressed -


Gene co-expression network
sample Sobic007G217500 Sobic007G217500 Sobic006G080300 Sobic006G080300 Sobic007G217500--Sobic006G080300 Sobic002G313300 Sobic002G313300 Sobic007G217500--Sobic002G313300 Sobic001G257300 Sobic001G257300 Sobic007G217500--Sobic001G257300 Sobic006G013500 Sobic006G013500 Sobic007G217500--Sobic006G013500 Sobic001G543900 Sobic001G543900 Sobic007G217500--Sobic001G543900 Sobic002G166500 Sobic002G166500 Sobic007G217500--Sobic002G166500 Sobic003G204000 Sobic003G204000 Sobic007G217500--Sobic003G204000 Sobic002G001600 Sobic002G001600 Sobic007G217500--Sobic002G001600 Sobic006G123900 Sobic006G123900 Sobic007G217500--Sobic006G123900 Sobic003G268300 Sobic003G268300 Sobic006G080300--Sobic003G268300 Sobic004G031700 Sobic004G031700 Sobic006G080300--Sobic004G031700 Sobic001G094000 Sobic001G094000 Sobic006G080300--Sobic001G094000 Sobic001G477800 Sobic001G477800 Sobic006G080300--Sobic001G477800 Sobic006G080300--Sobic002G313300 Sobic001G206100 Sobic001G206100 Sobic006G080300--Sobic001G206100 Sobic002G157000 Sobic002G157000 Sobic006G080300--Sobic002G157000 Sobic003G170100 Sobic003G170100 Sobic006G080300--Sobic003G170100 Sobic006G080300--Sobic001G257300 Sobic002G313300--Sobic001G477800 Sobic002G077200 Sobic002G077200 Sobic002G313300--Sobic002G077200 Sobic007G011400 Sobic007G011400 Sobic002G313300--Sobic007G011400 Sobic010G263800 Sobic010G263800 Sobic002G313300--Sobic010G263800 Sobic002G313300--Sobic001G543900 Sobic002G313300--Sobic006G080300 Sobic006G009400 Sobic006G009400 Sobic002G313300--Sobic006G009400 Sobic007G185900 Sobic007G185900 Sobic002G313300--Sobic007G185900 Sobic002G313300--Sobic004G031700 Sobic001G257300--Sobic001G206100 Sobic001G257300--Sobic006G013500 Sobic001G257300--Sobic003G170100 Sobic001G257300--Sobic006G080300 Sobic003G200200 Sobic003G200200 Sobic001G257300--Sobic003G200200 Sobic001G257300--Sobic002G001600 Sobic004G213000 Sobic004G213000 Sobic001G257300--Sobic004G213000 Sobic002G161000 Sobic002G161000 Sobic001G257300--Sobic002G161000 Sobic001G162300 Sobic001G162300 Sobic001G257300--Sobic001G162300 Sobic006G013500--Sobic001G206100 Sobic006G013500--Sobic001G257300 Sobic001G306900 Sobic001G306900 Sobic006G013500--Sobic001G306900 Sobic006G013500--Sobic006G080300 Sobic006G013500--Sobic004G031700 Sobic009G000500 Sobic009G000500 Sobic006G013500--Sobic009G000500 Sobic003G197800 Sobic003G197800 Sobic006G013500--Sobic003G197800 Sobic006G013500--Sobic001G094000 Sobic006G046700 Sobic006G046700 Sobic006G013500--Sobic006G046700 Sobic001G543900--Sobic001G477800 Sobic001G543900--Sobic002G313300 Sobic004G112500 Sobic004G112500 Sobic001G543900--Sobic004G112500 Sobic001G543900--Sobic002G001600 Sobic001G543900--Sobic006G009400 Sobic002G166700 Sobic002G166700 Sobic001G543900--Sobic002G166700 Sobic005G130200 Sobic005G130200 Sobic001G543900--Sobic005G130200 Sobic001G272000 Sobic001G272000 Sobic001G543900--Sobic001G272000 Sobic010G248200 Sobic010G248200 Sobic001G543900--Sobic010G248200 Sobic002G166500--Sobic006G080300 Sobic003G259901 Sobic003G259901 Sobic002G166500--Sobic003G259901 Sobic006G210100 Sobic006G210100 Sobic002G166500--Sobic006G210100 Sobic002G106100 Sobic002G106100 Sobic002G166500--Sobic002G106100 Sobic008G116500 Sobic008G116500 Sobic002G166500--Sobic008G116500 Sobic002G166500--Sobic002G157000 Sobic002G166500--Sobic007G217500 Sobic002G166500--Sobic001G206100 Sobic002G166500--Sobic001G257300 Sobic001G024200 Sobic001G024200 Sobic003G204000--Sobic001G024200 Sobic008G068800 Sobic008G068800 Sobic003G204000--Sobic008G068800 Sobic004G212800 Sobic004G212800 Sobic003G204000--Sobic004G212800 Sobic003G204000--Sobic008G116500 Sobic004G169501 Sobic004G169501 Sobic003G204000--Sobic004G169501 Sobic003G204000--Sobic001G543900 Sobic003G204000--Sobic004G112500 Sobic002G297800 Sobic002G297800 Sobic003G204000--Sobic002G297800 Sobic003G315332 Sobic003G315332 Sobic003G204000--Sobic003G315332 Sobic002G001600--Sobic008G116500 Sobic002G001600--Sobic001G543900 Sobic002G001600--Sobic002G313300 Sobic008G101800 Sobic008G101800 Sobic002G001600--Sobic008G101800 Sobic002G001600--Sobic007G185900 Sobic002G001600--Sobic002G166700 Sobic008G106000 Sobic008G106000 Sobic002G001600--Sobic008G106000 Sobic007G037100 Sobic007G037100 Sobic002G001600--Sobic007G037100 Sobic002G166600 Sobic002G166600 Sobic002G001600--Sobic002G166600 Sobic006G123900--Sobic008G106000 Sobic006G123900--Sobic002G001600 Sobic005G059100 Sobic005G059100 Sobic006G123900--Sobic005G059100 Sobic006G123900--Sobic002G313300 Sobic006G123900--Sobic006G013500 Sobic008G129700 Sobic008G129700 Sobic006G123900--Sobic008G129700 Sobic006G123900--Sobic006G080300 Sobic006G123900--Sobic007G185900 Sobic002G151600 Sobic002G151600 Sobic006G123900--Sobic002G151600
Octagon: transcription factors


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