Gene annotation
Transcriptome id Sobic.001G150800.1
Synonym Sb01g013090
Functional annotation expressed protein
UniProt C5WR22
Pfam PF10225
Panther DB PTHR31587:SF3 PTHR31587
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G28760 : Uncharacterized conserved protein (DUF2215)
RAP-DB (Rice) LOC_Os03g45180.1 : expressed protein
MaizeGDB (Corn) Zm00025a007572
Brachypodium KQK13927
Barley HORVU5Hr1G002110.29 , HORVU5Hr1G002110.23 , HORVU5Hr1G002110.21 , HORVU5Hr1G002110.26 , HORVU5Hr1G002110.24 , HORVU7Hr1G122210.9 , HORVU7Hr1G122210.8 , HORVU7Hr1G122210.7 , HORVU7Hr1G122210.6 , HORVU7Hr1G122210.5 , HORVU7Hr1G122210.4 , HORVU7Hr1G122210.3 , HORVU7Hr1G122210.2 , HORVU7Hr1G122210.1 , HORVU5Hr1G002110.59 , HORVU5Hr1G002110.56 , HORVU5Hr1G002110.54 , HORVU5Hr1G002110.52 , HORVU5Hr1G002110.51 , HORVU5Hr1G002110.50 , HORVU5Hr1G077680.2 , HORVU5Hr1G077680.1 , HORVU4Hr1G002010.3 , HORVU4Hr1G002010.2 , HORVU4Hr1G002010.1 , HORVU5Hr1G002110.49 , HORVU4Hr1G002010.5 , HORVU4Hr1G002010.4 , HORVU5Hr1G002110.44 , HORVU5Hr1G002110.46 , HORVU5Hr1G002110.41 , HORVU5Hr1G002110.43 , HORVU4Hr1G002010.8 , HORVU5Hr1G002110.62 , HORVU5Hr1G002110.60 , HORVU4Hr1G002010.7 , HORVU4Hr1G002010.6 , HORVU5Hr1G002110.1 , HORVU5Hr1G002110.6 , HORVU5Hr1G002110.5 , HORVU5Hr1G002110.4 , HORVU4Hr1G002010.9 , HORVU5Hr1G002110.13 , HORVU5Hr1G002110.10 , HORVU5Hr1G002110.16 , HORVU5Hr1G002110.15 , HORVU5Hr1G002110.19 , HORVU5Hr1G002110.18 , HORVU4Hr1G002010.11 , HORVU4Hr1G002010.10 , HORVU7Hr1G122210.16 , HORVU7Hr1G122210.15 , HORVU7Hr1G122210.14 , HORVU7Hr1G122210.13 , HORVU7Hr1G122210.12 , HORVU7Hr1G122210.11 , HORVU7Hr1G122210.10 , HORVU5Hr1G002110.34 , HORVU5Hr1G002110.30 , HORVU5Hr1G002110.33 , HORVU5Hr1G002110.32
Wheat TraesCSU02G067000 , TraesCS4D02G011800
Populus -


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cDNA sequences
Sobic.001G150800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G050100 ATKINESIN-13A/KINESIN-13A, putative, expressed K11091: U1 small nuclear ribonucleoprotein A
2 Sobic.004G109500 - -
3 Sobic.010G097400 thiol-disulphide oxidoreductase DCC, putative, expressed -
4 Sobic.001G157500 expressed protein -
5 Sobic.003G284500 mediator of RNA polymerase II transcription subunit 22, putative, expressed K15139: mediator of RNA polymerase II transcription subunit 22
6 Sobic.003G377200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
7 Sobic.004G180600 expressed protein K18172: COX assembly mitochondrial protein 2
8 Sobic.004G043200 expressed protein -
9 Sobic.006G255800 - -
10 Sobic.003G407500 - -
11 Sobic.008G075900 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
12 Sobic.004G097700 homeobox domain containing protein, expressed -
13 Sobic.005G108801 - -
14 Sobic.007G016000 - -
15 Sobic.006G177100 expressed protein K03671: thioredoxin 1
16 Sobic.004G172600 tetratricopeptide repeat containing protein, putative, expressed -
17 Sobic.001G072900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
18 Sobic.007G208500 expressed protein -
19 Sobic.002G270100 expressed protein K14795: ribosomal RNA-processing protein 36
20 Sobic.010G128900 beta-galactosidase precursor, putative, expressed -


Gene co-expression network
sample Sobic001G150800 Sobic001G150800 Sobic009G050100 Sobic009G050100 Sobic001G150800--Sobic009G050100 Sobic004G109500 Sobic004G109500 Sobic001G150800--Sobic004G109500 Sobic010G097400 Sobic010G097400 Sobic001G150800--Sobic010G097400 Sobic001G157500 Sobic001G157500 Sobic001G150800--Sobic001G157500 Sobic003G284500 Sobic003G284500 Sobic001G150800--Sobic003G284500 Sobic003G377200 Sobic003G377200 Sobic001G150800--Sobic003G377200 Sobic004G180600 Sobic004G180600 Sobic001G150800--Sobic004G180600 Sobic004G043200 Sobic004G043200 Sobic001G150800--Sobic004G043200 Sobic006G255800 Sobic006G255800 Sobic001G150800--Sobic006G255800 Sobic009G050100--Sobic003G284500 Sobic009G050100--Sobic001G150800 Sobic003G128500 Sobic003G128500 Sobic009G050100--Sobic003G128500 Sobic006G177100 Sobic006G177100 Sobic009G050100--Sobic006G177100 Sobic002G270100 Sobic002G270100 Sobic009G050100--Sobic002G270100 Sobic009G050100--Sobic010G097400 Sobic009G050100--Sobic003G377200 Sobic003G148500 Sobic003G148500 Sobic009G050100--Sobic003G148500 Sobic001G210700 Sobic001G210700 Sobic009G050100--Sobic001G210700 Sobic009G088401 Sobic009G088401 Sobic004G109500--Sobic009G088401 Sobic007G072400 Sobic007G072400 Sobic004G109500--Sobic007G072400 Sobic004G109500--Sobic004G180600 Sobic004G109500--Sobic004G043200 Sobic007G016000 Sobic007G016000 Sobic004G109500--Sobic007G016000 Sobic007G158400 Sobic007G158400 Sobic004G109500--Sobic007G158400 Sobic005G076650 Sobic005G076650 Sobic004G109500--Sobic005G076650 Sobic004G061600 Sobic004G061600 Sobic004G109500--Sobic004G061600 Sobic004G107400 Sobic004G107400 Sobic004G109500--Sobic004G107400 Sobic010G097400--Sobic006G177100 Sobic009G235300 Sobic009G235300 Sobic010G097400--Sobic009G235300 Sobic010G097400--Sobic004G109500 Sobic002G366700 Sobic002G366700 Sobic010G097400--Sobic002G366700 Sobic010G097400--Sobic003G284500 Sobic010G097400--Sobic003G128500 Sobic010G097400--Sobic003G377200 Sobic010G097400--Sobic001G150800 Sobic010G097400--Sobic004G180600 Sobic004G210101 Sobic004G210101 Sobic001G157500--Sobic004G210101 Sobic001G157500--Sobic001G150800 Sobic001G157500--Sobic009G050100 Sobic001G157500--Sobic003G284500 Sobic001G157500--Sobic010G097400 Sobic001G157500--Sobic002G270100 Sobic001G157500--Sobic006G177100 Sobic008G075900 Sobic008G075900 Sobic001G157500--Sobic008G075900 Sobic006G258400 Sobic006G258400 Sobic001G157500--Sobic006G258400 Sobic003G284500--Sobic003G128500 Sobic003G284500--Sobic007G072400 Sobic003G284500--Sobic004G109500 Sobic003G284500--Sobic009G088401 Sobic003G284500--Sobic009G050100 Sobic002G173600 Sobic002G173600 Sobic003G284500--Sobic002G173600 Sobic003G284500--Sobic004G107400 Sobic003G390300 Sobic003G390300 Sobic003G284500--Sobic003G390300 Sobic010G152700 Sobic010G152700 Sobic003G284500--Sobic010G152700 Sobic001G267500 Sobic001G267500 Sobic003G377200--Sobic001G267500 Sobic007G208500 Sobic007G208500 Sobic003G377200--Sobic007G208500 Sobic006G186200 Sobic006G186200 Sobic003G377200--Sobic006G186200 Sobic006G163650 Sobic006G163650 Sobic003G377200--Sobic006G163650 Sobic003G377200--Sobic004G180600 Sobic003G377200--Sobic003G390300 Sobic009G203400 Sobic009G203400 Sobic003G377200--Sobic009G203400 Sobic003G377200--Sobic005G076650 Sobic004G156600 Sobic004G156600 Sobic003G377200--Sobic004G156600 Sobic006G273500 Sobic006G273500 Sobic004G180600--Sobic006G273500 Sobic008G098098 Sobic008G098098 Sobic004G180600--Sobic008G098098 Sobic004G180600--Sobic009G088401 Sobic004G180600--Sobic007G016000 Sobic008G119200 Sobic008G119200 Sobic004G180600--Sobic008G119200 Sobic004G180600--Sobic004G107400 Sobic003G407500 Sobic003G407500 Sobic004G180600--Sobic003G407500 Sobic004G180600--Sobic007G072400 Sobic005G209800 Sobic005G209800 Sobic004G180600--Sobic005G209800 Sobic004G043200--Sobic009G088401 Sobic004G043200--Sobic004G107400 Sobic010G014900 Sobic010G014900 Sobic004G043200--Sobic010G014900 Sobic004G043200--Sobic007G072400 Sobic004G043200--Sobic003G390300 Sobic004G043200--Sobic005G076650 Sobic004G043200--Sobic007G158400 Sobic009G028600 Sobic009G028600 Sobic004G043200--Sobic009G028600 Sobic004G043200--Sobic004G109500 Sobic001G013600 Sobic001G013600 Sobic006G255800--Sobic001G013600 Sobic003G054100 Sobic003G054100 Sobic006G255800--Sobic003G054100 Sobic006G255800--Sobic004G180600 Sobic002G293900 Sobic002G293900 Sobic006G255800--Sobic002G293900 Sobic010G027800 Sobic010G027800 Sobic006G255800--Sobic010G027800 Sobic006G245200 Sobic006G245200 Sobic006G255800--Sobic006G245200 Sobic006G255800--Sobic009G050100 Sobic006G255800--Sobic001G150800 Sobic006G255800--Sobic004G109500
Octagon: transcription factors


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