Gene annotation
Transcriptome id Sobic.006G255800.1
Synonym
Functional annotation -
UniProt A0A1B6PNX8
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G02160 : Cox19 family protein (CHCH motif)
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a009409
Brachypodium -
Barley HORVU2Hr1G109140.1 , HORVU2Hr1G109140.3 , HORVU2Hr1G109140.4
Wheat TraesCS2D02G489100 , TraesCS2A02G488800
Populus -


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cDNA sequences
Sobic.006G255800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G013600 expressed protein -
2 Sobic.003G054100 expressed protein -
3 Sobic.004G180600 expressed protein K18172: COX assembly mitochondrial protein 2
4 Sobic.002G293900 mitochondrial glycoprotein, putative, expressed -
5 Sobic.010G027800 Brix domain containing protein, putative, expressed K14846: ribosome production factor 1
6 Sobic.006G245200 OsFBX239 - F-box domain containing protein, expressed -
7 Sobic.009G050100 ATKINESIN-13A/KINESIN-13A, putative, expressed K11091: U1 small nuclear ribonucleoprotein A
8 Sobic.001G150800 expressed protein -
9 Sobic.004G109500 - -
10 Sobic.006G248900 nucleolar protein,Nop52 containing protein, expressed K14849: ribosomal RNA-processing protein 1
11 Sobic.003G407500 - -
12 Sobic.003G377200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
13 Sobic.004G097700 homeobox domain containing protein, expressed -
14 Sobic.001G157500 expressed protein -
15 Sobic.004G223900 nucleolar matrix protein-related, putative, expressed -
16 Sobic.002G366700 expressed protein -
17 Sobic.007G208500 expressed protein -
18 Sobic.001G312700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@selenium-binding protein-like, putative, expressed -
19 Sobic.006G177100 expressed protein K03671: thioredoxin 1
20 Sobic.002G380600 transcription elongation factor SPT4 homolog 1, putative, expressed K15171: SUPT4H1, transcription elongation factor SPT4


Gene co-expression network
sample Sobic006G255800 Sobic006G255800 Sobic001G013600 Sobic001G013600 Sobic006G255800--Sobic001G013600 Sobic003G054100 Sobic003G054100 Sobic006G255800--Sobic003G054100 Sobic004G180600 Sobic004G180600 Sobic006G255800--Sobic004G180600 Sobic002G293900 Sobic002G293900 Sobic006G255800--Sobic002G293900 Sobic010G027800 Sobic010G027800 Sobic006G255800--Sobic010G027800 Sobic006G245200 Sobic006G245200 Sobic006G255800--Sobic006G245200 Sobic009G050100 Sobic009G050100 Sobic006G255800--Sobic009G050100 Sobic001G150800 Sobic001G150800 Sobic006G255800--Sobic001G150800 Sobic004G109500 Sobic004G109500 Sobic006G255800--Sobic004G109500 Sobic001G013600--Sobic006G255800 Sobic002G366700 Sobic002G366700 Sobic001G013600--Sobic002G366700 Sobic001G013600--Sobic010G027800 Sobic009G155500 Sobic009G155500 Sobic001G013600--Sobic009G155500 Sobic006G169400 Sobic006G169400 Sobic001G013600--Sobic006G169400 Sobic006G258400 Sobic006G258400 Sobic001G013600--Sobic006G258400 Sobic001G402701 Sobic001G402701 Sobic001G013600--Sobic001G402701 Sobic002G339400 Sobic002G339400 Sobic001G013600--Sobic002G339400 Sobic001G013600--Sobic006G245200 Sobic004G172600 Sobic004G172600 Sobic003G054100--Sobic004G172600 Sobic001G487000 Sobic001G487000 Sobic003G054100--Sobic001G487000 Sobic003G049800 Sobic003G049800 Sobic003G054100--Sobic003G049800 Sobic010G231700 Sobic010G231700 Sobic003G054100--Sobic010G231700 Sobic003G054100--Sobic006G255800 Sobic003G395500 Sobic003G395500 Sobic003G054100--Sobic003G395500 Sobic001G072900 Sobic001G072900 Sobic003G054100--Sobic001G072900 Sobic009G228300 Sobic009G228300 Sobic003G054100--Sobic009G228300 Sobic003G095200 Sobic003G095200 Sobic003G054100--Sobic003G095200 Sobic006G273500 Sobic006G273500 Sobic004G180600--Sobic006G273500 Sobic008G098098 Sobic008G098098 Sobic004G180600--Sobic008G098098 Sobic009G088401 Sobic009G088401 Sobic004G180600--Sobic009G088401 Sobic007G016000 Sobic007G016000 Sobic004G180600--Sobic007G016000 Sobic008G119200 Sobic008G119200 Sobic004G180600--Sobic008G119200 Sobic004G107400 Sobic004G107400 Sobic004G180600--Sobic004G107400 Sobic003G407500 Sobic003G407500 Sobic004G180600--Sobic003G407500 Sobic007G072400 Sobic007G072400 Sobic004G180600--Sobic007G072400 Sobic005G209800 Sobic005G209800 Sobic004G180600--Sobic005G209800 Sobic008G028500 Sobic008G028500 Sobic002G293900--Sobic008G028500 Sobic002G276700 Sobic002G276700 Sobic002G293900--Sobic002G276700 Sobic001G429100 Sobic001G429100 Sobic002G293900--Sobic001G429100 Sobic005G232000 Sobic005G232000 Sobic002G293900--Sobic005G232000 SobicK044200 SobicK044200 Sobic002G293900--SobicK044200 Sobic010G189800 Sobic010G189800 Sobic002G293900--Sobic010G189800 Sobic009G154000 Sobic009G154000 Sobic002G293900--Sobic009G154000 Sobic010G114500 Sobic010G114500 Sobic002G293900--Sobic010G114500 Sobic007G013500 Sobic007G013500 Sobic002G293900--Sobic007G013500 Sobic010G027800--Sobic001G402701 Sobic006G157300 Sobic006G157300 Sobic010G027800--Sobic006G157300 Sobic003G081400 Sobic003G081400 Sobic010G027800--Sobic003G081400 Sobic003G283750 Sobic003G283750 Sobic010G027800--Sobic003G283750 Sobic004G320300 Sobic004G320300 Sobic010G027800--Sobic004G320300 Sobic010G027800--Sobic006G169400 Sobic008G031600 Sobic008G031600 Sobic010G027800--Sobic008G031600 Sobic003G201400 Sobic003G201400 Sobic010G027800--Sobic003G201400 Sobic003G142900 Sobic003G142900 Sobic010G027800--Sobic003G142900 Sobic006G108000 Sobic006G108000 Sobic006G245200--Sobic006G108000 Sobic006G186200 Sobic006G186200 Sobic006G245200--Sobic006G186200 Sobic008G163800 Sobic008G163800 Sobic006G245200--Sobic008G163800 Sobic003G406500 Sobic003G406500 Sobic006G245200--Sobic003G406500 Sobic007G153300 Sobic007G153300 Sobic006G245200--Sobic007G153300 Sobic004G156600 Sobic004G156600 Sobic006G245200--Sobic004G156600 Sobic004G061600 Sobic004G061600 Sobic006G245200--Sobic004G061600 Sobic003G377200 Sobic003G377200 Sobic006G245200--Sobic003G377200 Sobic006G245200--Sobic004G107400 Sobic003G284500 Sobic003G284500 Sobic009G050100--Sobic003G284500 Sobic009G050100--Sobic001G150800 Sobic003G128500 Sobic003G128500 Sobic009G050100--Sobic003G128500 Sobic006G177100 Sobic006G177100 Sobic009G050100--Sobic006G177100 Sobic002G270100 Sobic002G270100 Sobic009G050100--Sobic002G270100 Sobic010G097400 Sobic010G097400 Sobic009G050100--Sobic010G097400 Sobic009G050100--Sobic003G377200 Sobic003G148500 Sobic003G148500 Sobic009G050100--Sobic003G148500 Sobic001G210700 Sobic001G210700 Sobic009G050100--Sobic001G210700 Sobic001G150800--Sobic009G050100 Sobic001G150800--Sobic004G109500 Sobic001G150800--Sobic010G097400 Sobic001G157500 Sobic001G157500 Sobic001G150800--Sobic001G157500 Sobic001G150800--Sobic003G284500 Sobic001G150800--Sobic003G377200 Sobic001G150800--Sobic004G180600 Sobic004G043200 Sobic004G043200 Sobic001G150800--Sobic004G043200 Sobic001G150800--Sobic006G255800 Sobic004G109500--Sobic009G088401 Sobic004G109500--Sobic007G072400 Sobic004G109500--Sobic004G180600 Sobic004G109500--Sobic004G043200 Sobic004G109500--Sobic007G016000 Sobic007G158400 Sobic007G158400 Sobic004G109500--Sobic007G158400 Sobic005G076650 Sobic005G076650 Sobic004G109500--Sobic005G076650 Sobic004G109500--Sobic004G061600 Sobic004G109500--Sobic004G107400
Octagon: transcription factors


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