Gene annotation
Transcriptome id Sobic.002G348900.1
Synonym CYP89A2, CYP89, Sb02g037140
Functional annotation cytochrome P450, putative, expressed
UniProt C5XCC1
Pfam PF00067
Panther DB PTHR24298 PTHR24298:SF88
NCBI CDD KOG0156; Cytochrome P450 CYP2 subfamily
KEGG Orthology -
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT1G64940 : cytochrome P450, family 87, subfamily A, polypeptide 6
RAP-DB (Rice) LOC_Os10g37100.1 : cytochrome P450, putative, expressed
MaizeGDB (Corn) Zm00025a014967 , Zm00025a014968 , Zm00025a006324 , Zm00025a006320 , Zm00025a010446
Brachypodium PNT66391 , KQJ97398 , KQJ97397
Barley HORVU1Hr1G080340.1 , HORVU1Hr1G086920.2 , HORVU1Hr1G086920.3 , HORVU1Hr1G086920.1 , HORVU4Hr1G089230.2 , HORVU4Hr1G089230.3 , HORVU4Hr1G089230.1 , HORVU1Hr1G047030.7 , HORVU1Hr1G047030.6 , HORVU1Hr1G047030.3 , HORVU1Hr1G047030.2 , HORVU1Hr1G047030.1 , HORVU1Hr1G047030.9 , HORVU1Hr1G047030.8 , HORVU1Hr1G087200.1 , HORVU1Hr1G047030.10 , HORVU1Hr1G047090.1 , HORVU1Hr1G047090.2
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G428700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
2 Sobic.004G087100 UDP-glucoronosyl and UDP-glucosyl transferase, putative, expressed -
3 Sobic.007G156700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
4 Sobic.010G099600 expressed protein -
5 Sobic.005G075900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@C1-like domain containing protein, expressed -
6 Sobic.006G137500 B4-BTB3 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed -
7 Sobic.001G494150 - -
8 Sobic.010G087200 expressed protein -
9 Sobic.002G339400 expressed protein -
10 Sobic.002G245900 AGC_PVPK_like_CDK8.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
11 Sobic.001G295100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.006G166700 plastocyanin-like domain containing protein, putative, expressed -
13 Sobic.001G076800 expressed protein -
14 Sobic.003G057366 - K11254: histone H4
15 Sobic.002G050900 uncharacterized protein At4g06744 precursor, putative, expressed -
16 Sobic.004G262900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
17 Sobic.009G008300 expressed protein -
18 Sobic.006G258400 OsFBX153 - F-box domain containing protein, expressed -
19 Sobic.004G288400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@harpin-induced protein 1 domain containing protein, expressed -
20 Sobic.006G157200 expressed protein -


Gene co-expression network
sample Sobic002G348900 Sobic002G348900 Sobic001G428700 Sobic001G428700 Sobic002G348900--Sobic001G428700 Sobic004G087100 Sobic004G087100 Sobic002G348900--Sobic004G087100 Sobic007G156700 Sobic007G156700 Sobic002G348900--Sobic007G156700 Sobic010G099600 Sobic010G099600 Sobic002G348900--Sobic010G099600 Sobic005G075900 Sobic005G075900 Sobic002G348900--Sobic005G075900 Sobic006G137500 Sobic006G137500 Sobic002G348900--Sobic006G137500 Sobic001G494150 Sobic001G494150 Sobic002G348900--Sobic001G494150 Sobic010G087200 Sobic010G087200 Sobic002G348900--Sobic010G087200 Sobic002G339400 Sobic002G339400 Sobic002G348900--Sobic002G339400 Sobic001G428700--Sobic010G087200 Sobic001G428700--Sobic001G494150 Sobic001G428700--Sobic002G339400 Sobic010G014300 Sobic010G014300 Sobic001G428700--Sobic010G014300 Sobic002G001300 Sobic002G001300 Sobic001G428700--Sobic002G001300 Sobic006G166700 Sobic006G166700 Sobic001G428700--Sobic006G166700 Sobic002G366700 Sobic002G366700 Sobic001G428700--Sobic002G366700 Sobic010G259200 Sobic010G259200 Sobic001G428700--Sobic010G259200 Sobic001G428700--Sobic002G348900 Sobic004G087100--Sobic001G428700 Sobic004G087100--Sobic007G156700 Sobic004G087100--Sobic002G348900 Sobic001G076800 Sobic001G076800 Sobic004G087100--Sobic001G076800 Sobic002G245900 Sobic002G245900 Sobic004G087100--Sobic002G245900 Sobic004G087100--Sobic010G099600 Sobic006G157200 Sobic006G157200 Sobic004G087100--Sobic006G157200 Sobic004G087100--Sobic005G075900 Sobic004G288400 Sobic004G288400 Sobic004G087100--Sobic004G288400 Sobic004G308900 Sobic004G308900 Sobic007G156700--Sobic004G308900 Sobic002G358300 Sobic002G358300 Sobic007G156700--Sobic002G358300 Sobic007G122800 Sobic007G122800 Sobic007G156700--Sobic007G122800 Sobic003G323201 Sobic003G323201 Sobic007G156700--Sobic003G323201 Sobic002G269100 Sobic002G269100 Sobic007G156700--Sobic002G269100 Sobic004G169200 Sobic004G169200 Sobic007G156700--Sobic004G169200 Sobic004G191400 Sobic004G191400 Sobic007G156700--Sobic004G191400 Sobic004G246600 Sobic004G246600 Sobic007G156700--Sobic004G246600 Sobic001G195200 Sobic001G195200 Sobic007G156700--Sobic001G195200 Sobic010G099600--Sobic005G075900 Sobic010G099600--Sobic002G339400 Sobic002G311400 Sobic002G311400 Sobic010G099600--Sobic002G311400 Sobic010G099600--Sobic001G428700 Sobic010G099600--Sobic004G288400 Sobic004G202000 Sobic004G202000 Sobic010G099600--Sobic004G202000 Sobic010G099600--Sobic006G157200 Sobic010G099600--Sobic006G166700 Sobic010G099600--Sobic002G348900 Sobic005G075900--Sobic010G099600 Sobic005G075900--Sobic007G156700 Sobic001G437000 Sobic001G437000 Sobic005G075900--Sobic001G437000 Sobic005G075900--Sobic002G245900 Sobic001G219200 Sobic001G219200 Sobic005G075900--Sobic001G219200 Sobic002G278500 Sobic002G278500 Sobic005G075900--Sobic002G278500 Sobic005G122500 Sobic005G122500 Sobic005G075900--Sobic005G122500 Sobic002G140300 Sobic002G140300 Sobic005G075900--Sobic002G140300 Sobic001G440200 Sobic001G440200 Sobic005G075900--Sobic001G440200 Sobic003G146400 Sobic003G146400 Sobic006G137500--Sobic003G146400 Sobic006G137500--Sobic001G076800 Sobic007G192300 Sobic007G192300 Sobic006G137500--Sobic007G192300 Sobic009G148100 Sobic009G148100 Sobic006G137500--Sobic009G148100 Sobic009G179500 Sobic009G179500 Sobic006G137500--Sobic009G179500 Sobic006G137500--Sobic007G156700 Sobic006G230900 Sobic006G230900 Sobic006G137500--Sobic006G230900 Sobic009G184000 Sobic009G184000 Sobic006G137500--Sobic009G184000 Sobic007G213800 Sobic007G213800 Sobic006G137500--Sobic007G213800 Sobic006G075700 Sobic006G075700 Sobic001G494150--Sobic006G075700 Sobic001G494150--Sobic010G259200 Sobic010G119600 Sobic010G119600 Sobic001G494150--Sobic010G119600 Sobic009G236500 Sobic009G236500 Sobic001G494150--Sobic009G236500 Sobic001G494150--Sobic002G001300 Sobic001G494150--Sobic002G366700 Sobic010G002850 Sobic010G002850 Sobic001G494150--Sobic010G002850 Sobic001G494150--Sobic010G087200 Sobic005G156700 Sobic005G156700 Sobic001G494150--Sobic005G156700 Sobic010G087200--Sobic002G001300 Sobic010G087200--Sobic010G259200 Sobic007G206700 Sobic007G206700 Sobic010G087200--Sobic007G206700 Sobic010G087200--Sobic001G428700 Sobic010G087200--Sobic010G014300 Sobic010G087200--Sobic001G494150 Sobic010G087200--Sobic006G166700 Sobic010G087200--Sobic010G119600 Sobic010G087200--Sobic002G366700 Sobic002G339400--Sobic002G366700 Sobic002G339400--Sobic001G494150 Sobic002G339400--Sobic010G087200 Sobic002G339400--Sobic001G428700 Sobic002G339400--Sobic004G288400 Sobic002G339400--Sobic010G014300 Sobic002G339400--Sobic006G075700 Sobic002G339400--Sobic006G166700 Sobic002G339400--Sobic010G259200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.