Gene annotation
Transcriptome id Sobic.004G262900.1
Synonym Sb04g030120
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt C5XZY2
Pfam -
Panther DB PTHR33237 PTHR33237:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G49000 : -
RAP-DB (Rice) LOC_Os02g48150.1 : expressed protein
MaizeGDB (Corn) Zm00025a021773 , Zm00025a021775
Brachypodium KQK18446
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G149500 dehydrin, putative, expressed -
2 Sobic.006G223900 expressed protein -
3 Sobic.003G025000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@carnitine racemase like protein, putative, expressed -
4 Sobic.006G244800 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
5 Sobic.009G015000 expressed protein -
6 Sobic.007G028400 - -
7 Sobic.002G348900 cytochrome P450, putative, expressed -
8 Sobic.002G311400 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
9 Sobic.007G172300 fiber protein Fb14, putative, expressed K03938: NADH dehydrogenase (ubiquinone) Fe-S protein 5
10 Sobic.003G109300 FAD dependent oxidoreductase domain containing protein, expressed K00306: sarcosine oxidase / L-pipecolate oxidase
11 Sobic.003G395500 expressed protein -
12 Sobic.001G041000 ribosomal protein L36 containing protein, expressed K02919: RP-L36, MRPL36, large subunit ribosomal protein L36
13 Sobic.010G132000 arabinogalactan peptide 23 precursor, putative, expressed -
14 Sobic.001G325600 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
15 Sobic.001G202700 expressed protein -
16 Sobic.003G057366 - K11254: histone H4
17 Sobic.007G005600 expressed protein -
18 Sobic.004G099500 40S ribosomal protein S24, putative, expressed K02974: RP-S24e, small subunit ribosomal protein S24e
19 Sobic.002G245900 AGC_PVPK_like_CDK8.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
20 Sobic.004G259700 60S ribosomal protein L31, putative, expressed K02910: RP-L31e, large subunit ribosomal protein L31e


Gene co-expression network
sample Sobic004G262900 Sobic004G262900 Sobic001G149500 Sobic001G149500 Sobic004G262900--Sobic001G149500 Sobic006G223900 Sobic006G223900 Sobic004G262900--Sobic006G223900 Sobic003G025000 Sobic003G025000 Sobic004G262900--Sobic003G025000 Sobic006G244800 Sobic006G244800 Sobic004G262900--Sobic006G244800 Sobic009G015000 Sobic009G015000 Sobic004G262900--Sobic009G015000 Sobic007G028400 Sobic007G028400 Sobic004G262900--Sobic007G028400 Sobic002G348900 Sobic002G348900 Sobic004G262900--Sobic002G348900 Sobic002G311400 Sobic002G311400 Sobic004G262900--Sobic002G311400 Sobic007G172300 Sobic007G172300 Sobic004G262900--Sobic007G172300 Sobic001G149500--Sobic004G262900 Sobic001G149500--Sobic003G025000 Sobic001G149500--Sobic006G223900 Sobic001G149500--Sobic002G311400 Sobic001G041000 Sobic001G041000 Sobic001G149500--Sobic001G041000 Sobic001G149500--Sobic006G244800 Sobic001G149500--Sobic009G015000 Sobic003G109300 Sobic003G109300 Sobic001G149500--Sobic003G109300 Sobic004G035200 Sobic004G035200 Sobic001G149500--Sobic004G035200 Sobic006G223900--Sobic003G025000 Sobic006G223900--Sobic004G262900 Sobic006G223900--Sobic003G109300 Sobic006G223900--Sobic001G149500 Sobic003G125000 Sobic003G125000 Sobic006G223900--Sobic003G125000 Sobic004G087800 Sobic004G087800 Sobic006G223900--Sobic004G087800 Sobic006G223900--Sobic007G172300 Sobic006G223900--Sobic009G015000 Sobic009G187900 Sobic009G187900 Sobic006G223900--Sobic009G187900 Sobic003G025000--Sobic003G109300 Sobic003G025000--Sobic006G223900 Sobic003G025000--Sobic001G149500 Sobic003G025000--Sobic009G015000 Sobic003G025000--Sobic002G311400 Sobic008G088803 Sobic008G088803 Sobic003G025000--Sobic008G088803 Sobic003G025000--Sobic004G262900 Sobic008G088860 Sobic008G088860 Sobic003G025000--Sobic008G088860 Sobic001G329600 Sobic001G329600 Sobic003G025000--Sobic001G329600 Sobic004G099500 Sobic004G099500 Sobic006G244800--Sobic004G099500 Sobic006G244800--Sobic009G015000 Sobic007G198000 Sobic007G198000 Sobic006G244800--Sobic007G198000 Sobic003G338966 Sobic003G338966 Sobic006G244800--Sobic003G338966 Sobic001G054800 Sobic001G054800 Sobic006G244800--Sobic001G054800 Sobic006G186700 Sobic006G186700 Sobic006G244800--Sobic006G186700 Sobic010G057100 Sobic010G057100 Sobic006G244800--Sobic010G057100 Sobic001G425300 Sobic001G425300 Sobic006G244800--Sobic001G425300 Sobic003G322532 Sobic003G322532 Sobic006G244800--Sobic003G322532 Sobic009G015000--Sobic010G057100 Sobic009G015000--Sobic004G099500 Sobic004G128000 Sobic004G128000 Sobic009G015000--Sobic004G128000 Sobic009G015000--Sobic007G172300 Sobic004G335600 Sobic004G335600 Sobic009G015000--Sobic004G335600 Sobic009G015000--Sobic003G322532 Sobic002G253000 Sobic002G253000 Sobic009G015000--Sobic002G253000 Sobic003G057366 Sobic003G057366 Sobic009G015000--Sobic003G057366 Sobic003G395500 Sobic003G395500 Sobic009G015000--Sobic003G395500 Sobic007G028400--Sobic003G322532 Sobic008G056100 Sobic008G056100 Sobic007G028400--Sobic008G056100 Sobic007G028400--Sobic003G057366 Sobic004G259700 Sobic004G259700 Sobic007G028400--Sobic004G259700 Sobic007G028400--Sobic004G262900 Sobic007G028400--Sobic010G057100 Sobic007G192700 Sobic007G192700 Sobic007G028400--Sobic007G192700 Sobic007G028400--Sobic009G015000 Sobic007G028400--Sobic001G054800 Sobic001G428700 Sobic001G428700 Sobic002G348900--Sobic001G428700 Sobic004G087100 Sobic004G087100 Sobic002G348900--Sobic004G087100 Sobic007G156700 Sobic007G156700 Sobic002G348900--Sobic007G156700 Sobic010G099600 Sobic010G099600 Sobic002G348900--Sobic010G099600 Sobic005G075900 Sobic005G075900 Sobic002G348900--Sobic005G075900 Sobic006G137500 Sobic006G137500 Sobic002G348900--Sobic006G137500 Sobic001G494150 Sobic001G494150 Sobic002G348900--Sobic001G494150 Sobic010G087200 Sobic010G087200 Sobic002G348900--Sobic010G087200 Sobic002G339400 Sobic002G339400 Sobic002G348900--Sobic002G339400 Sobic009G155500 Sobic009G155500 Sobic002G311400--Sobic009G155500 Sobic002G311400--Sobic010G099600 Sobic004G334100 Sobic004G334100 Sobic002G311400--Sobic004G334100 Sobic002G311400--Sobic003G025000 Sobic001G416800 Sobic001G416800 Sobic002G311400--Sobic001G416800 Sobic005G198300 Sobic005G198300 Sobic002G311400--Sobic005G198300 Sobic002G311400--Sobic003G057366 Sobic002G056300 Sobic002G056300 Sobic002G311400--Sobic002G056300 Sobic009G123000 Sobic009G123000 Sobic002G311400--Sobic009G123000 Sobic007G172300--Sobic003G395500 Sobic007G172300--Sobic009G015000 Sobic003G187100 Sobic003G187100 Sobic007G172300--Sobic003G187100 Sobic007G172300--Sobic003G057366 Sobic007G172300--Sobic004G128000 Sobic007G172300--Sobic004G259700 Sobic001G416900 Sobic001G416900 Sobic007G172300--Sobic001G416900 Sobic007G172300--Sobic004G099500 Sobic007G172300--Sobic001G416800
Octagon: transcription factors


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