Gene annotation
Transcriptome id Sobic.007G028400.1
Synonym
Functional annotation -
UniProt A0A1B6PF70
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a040388 , Zm00025a030178
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.007G028400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G322532 - K02975: RP-S25e, small subunit ribosomal protein S25e
2 Sobic.008G056100 - -
3 Sobic.003G057366 - K11254: histone H4
4 Sobic.004G259700 60S ribosomal protein L31, putative, expressed K02910: RP-L31e, large subunit ribosomal protein L31e
5 Sobic.004G262900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.010G057100 expressed protein K02983: RP-S30e, small subunit ribosomal protein S30e
7 Sobic.007G192700 nascent polypeptide-associated complex subunit alpha, putative, expressed K03626: EGD2, nascent polypeptide-associated complex subunit alpha
8 Sobic.009G015000 expressed protein -
9 Sobic.001G054800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AT hook-containing DNA-binding protein, putative, expressed K11275: histone H1/5
10 Sobic.004G099500 40S ribosomal protein S24, putative, expressed K02974: RP-S24e, small subunit ribosomal protein S24e
11 Sobic.007G168400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.002G050400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@LTPL78 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
13 Sobic.007G211700 60S ribosomal protein L31, putative, expressed K02910: RP-L31e, large subunit ribosomal protein L31e
14 Sobic.003G338966 - -
15 Sobic.002G276000 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
16 Sobic.006G244800 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
17 Sobic.007G198000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AIR12, putative, expressed -
18 Sobic.010G047100 histone H3, putative, expressed K11253: histone H3
19 Sobic.009G167500 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
20 Sobic.007G172300 fiber protein Fb14, putative, expressed K03938: NADH dehydrogenase (ubiquinone) Fe-S protein 5


Gene co-expression network
sample Sobic007G028400 Sobic007G028400 Sobic003G322532 Sobic003G322532 Sobic007G028400--Sobic003G322532 Sobic008G056100 Sobic008G056100 Sobic007G028400--Sobic008G056100 Sobic003G057366 Sobic003G057366 Sobic007G028400--Sobic003G057366 Sobic004G259700 Sobic004G259700 Sobic007G028400--Sobic004G259700 Sobic004G262900 Sobic004G262900 Sobic007G028400--Sobic004G262900 Sobic010G057100 Sobic010G057100 Sobic007G028400--Sobic010G057100 Sobic007G192700 Sobic007G192700 Sobic007G028400--Sobic007G192700 Sobic009G015000 Sobic009G015000 Sobic007G028400--Sobic009G015000 Sobic001G054800 Sobic001G054800 Sobic007G028400--Sobic001G054800 Sobic002G414700 Sobic002G414700 Sobic003G322532--Sobic002G414700 Sobic001G295200 Sobic001G295200 Sobic003G322532--Sobic001G295200 Sobic007G211700 Sobic007G211700 Sobic003G322532--Sobic007G211700 Sobic005G107900 Sobic005G107900 Sobic003G322532--Sobic005G107900 Sobic001G367600 Sobic001G367600 Sobic003G322532--Sobic001G367600 Sobic003G152600 Sobic003G152600 Sobic003G322532--Sobic003G152600 Sobic003G043600 Sobic003G043600 Sobic003G322532--Sobic003G043600 Sobic009G111000 Sobic009G111000 Sobic003G322532--Sobic009G111000 Sobic001G493001 Sobic001G493001 Sobic003G322532--Sobic001G493001 Sobic008G056100--Sobic007G028400 Sobic009G198700 Sobic009G198700 Sobic008G056100--Sobic009G198700 Sobic008G056100--Sobic001G054800 Sobic008G056100--Sobic003G057366 Sobic002G336100 Sobic002G336100 Sobic008G056100--Sobic002G336100 Sobic007G165000 Sobic007G165000 Sobic008G056100--Sobic007G165000 Sobic002G291066 Sobic002G291066 Sobic008G056100--Sobic002G291066 Sobic010G047100 Sobic010G047100 Sobic008G056100--Sobic010G047100 Sobic007G144600 Sobic007G144600 Sobic008G056100--Sobic007G144600 Sobic009G167500 Sobic009G167500 Sobic003G057366--Sobic009G167500 Sobic003G057366--Sobic010G057100 Sobic004G099500 Sobic004G099500 Sobic003G057366--Sobic004G099500 Sobic001G416900 Sobic001G416900 Sobic003G057366--Sobic001G416900 Sobic003G057366--Sobic009G015000 Sobic001G416800 Sobic001G416800 Sobic003G057366--Sobic001G416800 Sobic007G172300 Sobic007G172300 Sobic003G057366--Sobic007G172300 Sobic002G050400 Sobic002G050400 Sobic003G057366--Sobic002G050400 Sobic001G009700 Sobic001G009700 Sobic003G057366--Sobic001G009700 Sobic004G259700--Sobic001G416900 Sobic004G259700--Sobic009G167500 Sobic009G123000 Sobic009G123000 Sobic004G259700--Sobic009G123000 Sobic004G259700--Sobic004G099500 Sobic004G259700--Sobic001G416800 Sobic003G127600 Sobic003G127600 Sobic004G259700--Sobic003G127600 Sobic004G259700--Sobic007G172300 Sobic004G259700--Sobic003G057366 Sobic007G168400 Sobic007G168400 Sobic004G259700--Sobic007G168400 Sobic001G149500 Sobic001G149500 Sobic004G262900--Sobic001G149500 Sobic006G223900 Sobic006G223900 Sobic004G262900--Sobic006G223900 Sobic003G025000 Sobic003G025000 Sobic004G262900--Sobic003G025000 Sobic006G244800 Sobic006G244800 Sobic004G262900--Sobic006G244800 Sobic004G262900--Sobic009G015000 Sobic004G262900--Sobic007G028400 Sobic002G348900 Sobic002G348900 Sobic004G262900--Sobic002G348900 Sobic002G311400 Sobic002G311400 Sobic004G262900--Sobic002G311400 Sobic004G262900--Sobic007G172300 Sobic010G057100--Sobic004G099500 Sobic010G057100--Sobic009G015000 Sobic004G335600 Sobic004G335600 Sobic010G057100--Sobic004G335600 Sobic010G057100--Sobic003G057366 Sobic010G057100--Sobic003G322532 Sobic004G128000 Sobic004G128000 Sobic010G057100--Sobic004G128000 Sobic009G177700 Sobic009G177700 Sobic010G057100--Sobic009G177700 Sobic007G045700 Sobic007G045700 Sobic010G057100--Sobic007G045700 Sobic001G313200 Sobic001G313200 Sobic010G057100--Sobic001G313200 Sobic001G371400 Sobic001G371400 Sobic007G192700--Sobic001G371400 Sobic007G192700--Sobic001G493001 Sobic004G055700 Sobic004G055700 Sobic007G192700--Sobic004G055700 Sobic003G150000 Sobic003G150000 Sobic007G192700--Sobic003G150000 Sobic001G361600 Sobic001G361600 Sobic007G192700--Sobic001G361600 Sobic004G008400 Sobic004G008400 Sobic007G192700--Sobic004G008400 Sobic003G078200 Sobic003G078200 Sobic007G192700--Sobic003G078200 Sobic001G018900 Sobic001G018900 Sobic007G192700--Sobic001G018900 Sobic006G067800 Sobic006G067800 Sobic007G192700--Sobic006G067800 Sobic009G015000--Sobic010G057100 Sobic009G015000--Sobic004G099500 Sobic009G015000--Sobic004G128000 Sobic009G015000--Sobic007G172300 Sobic009G015000--Sobic004G335600 Sobic009G015000--Sobic003G322532 Sobic002G253000 Sobic002G253000 Sobic009G015000--Sobic002G253000 Sobic009G015000--Sobic003G057366 Sobic003G395500 Sobic003G395500 Sobic009G015000--Sobic003G395500 Sobic002G276000 Sobic002G276000 Sobic001G054800--Sobic002G276000 Sobic003G057100 Sobic003G057100 Sobic001G054800--Sobic003G057100 Sobic001G054800--Sobic002G291066 Sobic007G198000 Sobic007G198000 Sobic001G054800--Sobic007G198000 Sobic001G054800--Sobic001G009700 Sobic001G529400 Sobic001G529400 Sobic001G054800--Sobic001G529400 Sobic003G347900 Sobic003G347900 Sobic001G054800--Sobic003G347900 Sobic001G054800--Sobic009G167500 Sobic001G054800--Sobic010G047100
Octagon: transcription factors


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