Gene annotation
Transcriptome id Sobic.007G192700.1
Synonym Sb07g026160, NACA3
Functional annotation nascent polypeptide-associated complex subunit alpha, putative, expressed
UniProt C5YHS2
Pfam PF01849
Panther DB PTHR21713
NCBI CDD KOG2239; Transcription factor containing NAC and TS-N domains
KEGG Orthology K03626; EGD2, nascent polypeptide-associated complex subunit alpha
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G12390 : Nascent polypeptide-associated complex (NAC), alpha subunit family protein
RAP-DB (Rice) LOC_Os01g71230.1 : nascent polypeptide-associated complex subunit alpha-like protein 3, putative, expressed
MaizeGDB (Corn) Zm00025a002476 , Zm00025a030409 , Zm00025a052374
Brachypodium KQK21678
Barley -
Wheat TraesCS4A02G138000 , TraesCS4D02G164400
Populus -


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cDNA sequences
Sobic.007G192700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G371400 nascent polypeptide-associated complex subunit alpha, putative, expressed K03626: EGD2, nascent polypeptide-associated complex subunit alpha
2 Sobic.001G493001 - K02979: RP-S28e, small subunit ribosomal protein S28e
3 Sobic.004G055700 -(PubMedID : 26976818)@glycine cleavage system H protein, putative, expressed K02437: gcvH, glycine cleavage system H protein
4 Sobic.003G150000 split hand/foot malformation type 1, putative, expressed K10881: SHFM1, DSS1, 26 proteasome complex subunit DSS1
5 Sobic.001G361600 chaperonin, putative, expressed K04078: groES, chaperonin GroES
6 Sobic.004G008400 ribosomal protein L37, putative, expressed K02922: RP-L37e, large subunit ribosomal protein L37e
7 Sobic.003G078200 ribosomal protein L24, putative, expressed K02898: RP-L26e, large subunit ribosomal protein L26e
8 Sobic.001G018900 40S ribosomal protein S4, putative, expressed K02987: RP-S4e, small subunit ribosomal protein S4e
9 Sobic.006G067800 60S acidic ribosomal protein, putative, expressed K02943: RP-LP2, large subunit ribosomal protein LP2
10 Sobic.006G057200 L11 domain containing ribosomal protein, putative, expressed K02870: RP-L12e, large subunit ribosomal protein L12e
11 Sobic.001G295200 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase
12 Sobic.009G050300 60S ribosomal protein L18-3, putative, expressed K02883: RP-L18e, large subunit ribosomal protein L18e
13 Sobic.006G116700 60S ribosomal protein L6, putative, expressed K02934: RP-L6e, large subunit ribosomal protein L6e
14 Sobic.007G197800 60S ribosomal protein L32, putative, expressed K02912: RP-L32e, large subunit ribosomal protein L32e
15 Sobic.010G070500 60S ribosomal protein L35a-3, putative, expressed K02917: RP-L35Ae, large subunit ribosomal protein L35Ae
16 Sobic.002G286900 ribosomal protein L14, putative, expressed K02875: RP-L14e, large subunit ribosomal protein L14e
17 Sobic.005G113300 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
18 Sobic.003G125650 - K02183: calmodulin
19 Sobic.005G110800 - -
20 Sobic.002G200600 60S ribosomal protein L34, putative, expressed K02915: RP-L34e, large subunit ribosomal protein L34e


Gene co-expression network
sample Sobic007G192700 Sobic007G192700 Sobic001G371400 Sobic001G371400 Sobic007G192700--Sobic001G371400 Sobic001G493001 Sobic001G493001 Sobic007G192700--Sobic001G493001 Sobic004G055700 Sobic004G055700 Sobic007G192700--Sobic004G055700 Sobic003G150000 Sobic003G150000 Sobic007G192700--Sobic003G150000 Sobic001G361600 Sobic001G361600 Sobic007G192700--Sobic001G361600 Sobic004G008400 Sobic004G008400 Sobic007G192700--Sobic004G008400 Sobic003G078200 Sobic003G078200 Sobic007G192700--Sobic003G078200 Sobic001G018900 Sobic001G018900 Sobic007G192700--Sobic001G018900 Sobic006G067800 Sobic006G067800 Sobic007G192700--Sobic006G067800 Sobic001G371400--Sobic007G192700 Sobic002G286900 Sobic002G286900 Sobic001G371400--Sobic002G286900 Sobic010G060500 Sobic010G060500 Sobic001G371400--Sobic010G060500 Sobic006G260400 Sobic006G260400 Sobic001G371400--Sobic006G260400 Sobic001G371400--Sobic004G008400 Sobic007G197800 Sobic007G197800 Sobic001G371400--Sobic007G197800 Sobic009G050300 Sobic009G050300 Sobic001G371400--Sobic009G050300 Sobic003G346600 Sobic003G346600 Sobic001G371400--Sobic003G346600 Sobic002G255300 Sobic002G255300 Sobic001G371400--Sobic002G255300 Sobic001G130301 Sobic001G130301 Sobic001G493001--Sobic001G130301 Sobic001G374700 Sobic001G374700 Sobic001G493001--Sobic001G374700 Sobic006G047400 Sobic006G047400 Sobic001G493001--Sobic006G047400 Sobic007G184600 Sobic007G184600 Sobic001G493001--Sobic007G184600 Sobic001G402050 Sobic001G402050 Sobic001G493001--Sobic001G402050 Sobic001G493001--Sobic009G050300 Sobic001G493001--Sobic001G018900 Sobic002G081600 Sobic002G081600 Sobic001G493001--Sobic002G081600 Sobic002G200600 Sobic002G200600 Sobic001G493001--Sobic002G200600 Sobic005G113300 Sobic005G113300 Sobic004G055700--Sobic005G113300 Sobic003G160700 Sobic003G160700 Sobic004G055700--Sobic003G160700 Sobic004G055700--Sobic001G361600 Sobic009G188000 Sobic009G188000 Sobic004G055700--Sobic009G188000 Sobic002G090300 Sobic002G090300 Sobic004G055700--Sobic002G090300 Sobic002G418400 Sobic002G418400 Sobic004G055700--Sobic002G418400 Sobic010G028200 Sobic010G028200 Sobic004G055700--Sobic010G028200 Sobic004G042000 Sobic004G042000 Sobic004G055700--Sobic004G042000 Sobic004G220000 Sobic004G220000 Sobic004G055700--Sobic004G220000 Sobic005G110800 Sobic005G110800 Sobic003G150000--Sobic005G110800 Sobic010G204500 Sobic010G204500 Sobic003G150000--Sobic010G204500 Sobic003G249700 Sobic003G249700 Sobic003G150000--Sobic003G249700 Sobic003G150000--Sobic001G493001 Sobic001G403500 Sobic001G403500 Sobic003G150000--Sobic001G403500 Sobic001G054900 Sobic001G054900 Sobic003G150000--Sobic001G054900 Sobic003G150000--Sobic009G050300 Sobic005G019700 Sobic005G019700 Sobic003G150000--Sobic005G019700 Sobic009G163800 Sobic009G163800 Sobic003G150000--Sobic009G163800 Sobic001G295200 Sobic001G295200 Sobic001G361600--Sobic001G295200 Sobic001G361600--Sobic005G113300 Sobic006G116700 Sobic006G116700 Sobic001G361600--Sobic006G116700 Sobic001G361600--Sobic001G018900 Sobic001G361600--Sobic004G220000 Sobic001G361600--Sobic003G078200 Sobic006G141700 Sobic006G141700 Sobic001G361600--Sobic006G141700 Sobic001G361600--Sobic009G188000 Sobic003G408100 Sobic003G408100 Sobic001G361600--Sobic003G408100 Sobic004G008400--Sobic009G050300 Sobic007G178600 Sobic007G178600 Sobic004G008400--Sobic007G178600 Sobic004G008400--Sobic003G346600 Sobic004G008400--Sobic006G116700 Sobic004G008400--Sobic002G255300 Sobic004G008400--Sobic007G197800 Sobic003G436700 Sobic003G436700 Sobic004G008400--Sobic003G436700 Sobic006G137100 Sobic006G137100 Sobic004G008400--Sobic006G137100 Sobic002G379500 Sobic002G379500 Sobic004G008400--Sobic002G379500 Sobic002G372400 Sobic002G372400 Sobic003G078200--Sobic002G372400 Sobic009G054800 Sobic009G054800 Sobic003G078200--Sobic009G054800 Sobic010G206200 Sobic010G206200 Sobic003G078200--Sobic010G206200 Sobic003G078200--Sobic005G019700 Sobic003G078200--Sobic007G197800 Sobic007G018300 Sobic007G018300 Sobic003G078200--Sobic007G018300 Sobic003G078200--Sobic009G050300 Sobic003G078200--Sobic001G018900 Sobic003G078200--Sobic006G116700 Sobic001G018900--Sobic006G116700 Sobic009G215200 Sobic009G215200 Sobic001G018900--Sobic009G215200 Sobic001G018900--Sobic009G050300 Sobic001G036900 Sobic001G036900 Sobic001G018900--Sobic001G036900 Sobic001G018900--Sobic007G197800 Sobic002G375100 Sobic002G375100 Sobic001G018900--Sobic002G375100 Sobic001G018900--Sobic001G130301 Sobic001G016400 Sobic001G016400 Sobic001G018900--Sobic001G016400 Sobic001G018900--Sobic003G408100 Sobic006G067800--Sobic002G200600 Sobic006G067800--Sobic002G081600 Sobic006G067800--Sobic001G402050 Sobic006G067800--Sobic006G116700 Sobic006G067800--Sobic009G050300 Sobic006G067800--Sobic009G215200 Sobic006G067800--Sobic007G197800 Sobic006G067800--Sobic003G436700 Sobic006G067800--Sobic001G130301
Octagon: transcription factors


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