Gene annotation
Transcriptome id Sobic.008G056100.1
Synonym
Functional annotation -
UniProt A0A1B6PC74
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G028400 - -
2 Sobic.009G198700 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
3 Sobic.001G054800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AT hook-containing DNA-binding protein, putative, expressed K11275: histone H1/5
4 Sobic.003G057366 - K11254: histone H4
5 Sobic.002G336100 "The expression of SbCYP728B1 and SbCYP728B35 was significantly upregulated under Pi-deficient conditions(PubMedID : 34970291)@cytochrome P450 domain containing protein, expressed -
6 Sobic.007G165000 zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.002G291066 - K11254: histone H4
8 Sobic.010G047100 histone H3, putative, expressed K11253: histone H3
9 Sobic.007G144600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@receptor-like protein kinase precursor, putative, expressed -
10 Sobic.001G288900 -(PubMedID : 26976818)@mitochondrial carrier protein, putative, expressed K15109: SLC25A20_29, CACT, CACL, solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29
11 Sobic.006G223900 expressed protein -
12 Sobic.003G322532 - K02975: RP-S25e, small subunit ribosomal protein S25e
13 Sobic.007G172300 fiber protein Fb14, putative, expressed K03938: NADH dehydrogenase (ubiquinone) Fe-S protein 5
14 Sobic.007G213400 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@- -
15 Sobic.004G262900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.001G529400 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11254: histone H4
17 Sobic.001G009700 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
18 Sobic.001G427600 ZOS3-08 - C2H2 zinc finger protein, expressed -
19 Sobic.003G039100 expressed protein -
20 Sobic.004G326000 RING-H2 finger protein, putative, expressed -


Gene co-expression network
sample Sobic008G056100 Sobic008G056100 Sobic007G028400 Sobic007G028400 Sobic008G056100--Sobic007G028400 Sobic009G198700 Sobic009G198700 Sobic008G056100--Sobic009G198700 Sobic001G054800 Sobic001G054800 Sobic008G056100--Sobic001G054800 Sobic003G057366 Sobic003G057366 Sobic008G056100--Sobic003G057366 Sobic002G336100 Sobic002G336100 Sobic008G056100--Sobic002G336100 Sobic007G165000 Sobic007G165000 Sobic008G056100--Sobic007G165000 Sobic002G291066 Sobic002G291066 Sobic008G056100--Sobic002G291066 Sobic010G047100 Sobic010G047100 Sobic008G056100--Sobic010G047100 Sobic007G144600 Sobic007G144600 Sobic008G056100--Sobic007G144600 Sobic003G322532 Sobic003G322532 Sobic007G028400--Sobic003G322532 Sobic007G028400--Sobic008G056100 Sobic007G028400--Sobic003G057366 Sobic004G259700 Sobic004G259700 Sobic007G028400--Sobic004G259700 Sobic004G262900 Sobic004G262900 Sobic007G028400--Sobic004G262900 Sobic010G057100 Sobic010G057100 Sobic007G028400--Sobic010G057100 Sobic007G192700 Sobic007G192700 Sobic007G028400--Sobic007G192700 Sobic009G015000 Sobic009G015000 Sobic007G028400--Sobic009G015000 Sobic007G028400--Sobic001G054800 Sobic009G198700--Sobic008G056100 Sobic009G198700--Sobic007G028400 Sobic009G189300 Sobic009G189300 Sobic009G198700--Sobic009G189300 Sobic005G196700 Sobic005G196700 Sobic009G198700--Sobic005G196700 Sobic006G177600 Sobic006G177600 Sobic009G198700--Sobic006G177600 Sobic002G412200 Sobic002G412200 Sobic009G198700--Sobic002G412200 Sobic010G083300 Sobic010G083300 Sobic009G198700--Sobic010G083300 Sobic002G196900 Sobic002G196900 Sobic009G198700--Sobic002G196900 Sobic010G189900 Sobic010G189900 Sobic009G198700--Sobic010G189900 Sobic002G276000 Sobic002G276000 Sobic001G054800--Sobic002G276000 Sobic003G057100 Sobic003G057100 Sobic001G054800--Sobic003G057100 Sobic001G054800--Sobic002G291066 Sobic007G198000 Sobic007G198000 Sobic001G054800--Sobic007G198000 Sobic001G009700 Sobic001G009700 Sobic001G054800--Sobic001G009700 Sobic001G529400 Sobic001G529400 Sobic001G054800--Sobic001G529400 Sobic003G347900 Sobic003G347900 Sobic001G054800--Sobic003G347900 Sobic009G167500 Sobic009G167500 Sobic001G054800--Sobic009G167500 Sobic001G054800--Sobic010G047100 Sobic003G057366--Sobic009G167500 Sobic003G057366--Sobic010G057100 Sobic004G099500 Sobic004G099500 Sobic003G057366--Sobic004G099500 Sobic001G416900 Sobic001G416900 Sobic003G057366--Sobic001G416900 Sobic003G057366--Sobic009G015000 Sobic001G416800 Sobic001G416800 Sobic003G057366--Sobic001G416800 Sobic007G172300 Sobic007G172300 Sobic003G057366--Sobic007G172300 Sobic002G050400 Sobic002G050400 Sobic003G057366--Sobic002G050400 Sobic003G057366--Sobic001G009700 Sobic005G021800 Sobic005G021800 Sobic002G336100--Sobic005G021800 Sobic004G024200 Sobic004G024200 Sobic002G336100--Sobic004G024200 Sobic008G187001 Sobic008G187001 Sobic002G336100--Sobic008G187001 Sobic009G131400 Sobic009G131400 Sobic002G336100--Sobic009G131400 Sobic006G207100 Sobic006G207100 Sobic002G336100--Sobic006G207100 Sobic009G032000 Sobic009G032000 Sobic002G336100--Sobic009G032000 Sobic001G100600 Sobic001G100600 Sobic002G336100--Sobic001G100600 Sobic004G246600 Sobic004G246600 Sobic002G336100--Sobic004G246600 Sobic001G256700 Sobic001G256700 Sobic002G336100--Sobic001G256700 Sobic008G009450 Sobic008G009450 Sobic007G165000--Sobic008G009450 Sobic001G288900 Sobic001G288900 Sobic007G165000--Sobic001G288900 Sobic001G270200 Sobic001G270200 Sobic007G165000--Sobic001G270200 Sobic001G044100 Sobic001G044100 Sobic007G165000--Sobic001G044100 Sobic010G088400 Sobic010G088400 Sobic007G165000--Sobic010G088400 Sobic001G015600 Sobic001G015600 Sobic007G165000--Sobic001G015600 Sobic006G240650 Sobic006G240650 Sobic007G165000--Sobic006G240650 Sobic004G133301 Sobic004G133301 Sobic007G165000--Sobic004G133301 Sobic003G125000 Sobic003G125000 Sobic007G165000--Sobic003G125000 Sobic002G291066--Sobic001G054800 Sobic002G291066--Sobic001G529400 Sobic002G291066--Sobic003G057100 Sobic006G186700 Sobic006G186700 Sobic002G291066--Sobic006G186700 Sobic002G291066--Sobic002G276000 Sobic001G313200 Sobic001G313200 Sobic002G291066--Sobic001G313200 Sobic002G291066--Sobic007G198000 Sobic002G291066--Sobic010G047100 Sobic002G291066--Sobic010G057100 Sobic010G047100--Sobic001G313200 Sobic010G047100--Sobic001G529400 Sobic004G041900 Sobic004G041900 Sobic010G047100--Sobic004G041900 Sobic006G191800 Sobic006G191800 Sobic010G047100--Sobic006G191800 Sobic010G221300 Sobic010G221300 Sobic010G047100--Sobic010G221300 Sobic001G031700 Sobic001G031700 Sobic010G047100--Sobic001G031700 Sobic003G160700 Sobic003G160700 Sobic010G047100--Sobic003G160700 Sobic010G047100--Sobic003G322532 Sobic003G125650 Sobic003G125650 Sobic010G047100--Sobic003G125650 Sobic001G437000 Sobic001G437000 Sobic007G144600--Sobic001G437000 Sobic001G399900 Sobic001G399900 Sobic007G144600--Sobic001G399900 Sobic001G219200 Sobic001G219200 Sobic007G144600--Sobic001G219200 Sobic001G399300 Sobic001G399300 Sobic007G144600--Sobic001G399300 Sobic010G065900 Sobic010G065900 Sobic007G144600--Sobic010G065900 Sobic003G249000 Sobic003G249000 Sobic007G144600--Sobic003G249000 Sobic002G074200 Sobic002G074200 Sobic007G144600--Sobic002G074200 Sobic003G210100 Sobic003G210100 Sobic007G144600--Sobic003G210100 Sobic006G159600 Sobic006G159600 Sobic007G144600--Sobic006G159600
Octagon: transcription factors


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