Gene annotation
Transcriptome id Sobic.001G288900.1
Synonym Sb01g028320, BOU
Functional annotation - (PubMedID : 26976818)
mitochondrial carrier protein, putative, expressed
UniProt C5WRC1
Pfam PF00153
Panther DB PTHR24089 PTHR24089:SF271
NCBI CDD KOG0758; Mitochondrial carnitine-acylcarnitine carrier protein
KEGG Orthology K15109; SLC25A20_29, CACT, CACL, solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G46800 : Mitochondrial substrate carrier family protein
RAP-DB (Rice) LOC_Os10g42299.3 : mitochondrial carrier protein, putative, expressed
MaizeGDB (Corn) Zm00025a003477
Brachypodium KQJ97912
Barley HORVU1Hr1G050130.8 , HORVU1Hr1G050130.9 , HORVU1Hr1G050130.6 , HORVU1Hr1G050130.7 , HORVU1Hr1G050130.5 , HORVU1Hr1G050130.10 , HORVU1Hr1G050130.11
Wheat TraesCS1D02G195500 , TraesCS1B02G206900 , TraesCS1A02G191900
Populus PNT54447 , PNT54449 , PNT54448


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G165000 zinc finger, C3HC4 type domain containing protein, expressed -
2 Sobic.010G132000 arabinogalactan peptide 23 precursor, putative, expressed -
3 Sobic.001G039000 DUF567 domain containing protein, putative, expressed -
4 Sobic.001G270200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
5 Sobic.010G271501 - -
6 Sobic.008G009450 - -
7 Sobic.006G240650 - -
8 Sobic.003G258600 expressed protein -
9 Sobic.001G044100 Up-reguralion under heat(PubMedID : 24916767)@cytochrome P450, putative, expressed -
10 Sobic.003G125000 serpin domain containing protein, putative, expressed K13963: serpin B
11 Sobic.010G088400 phosphate-induced protein 1 conserved region domain containing protein, expressed -
12 Sobic.010G065900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@formin-like protein 13, putative, expressed -
13 Sobic.004G133301 - -
14 Sobic.004G243100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
15 Sobic.003G282901 - -
16 Sobic.007G051300 dnaJ domain containing protein, expressed K09510: DnaJ homolog subfamily B member 4
17 Sobic.010G042500 expressed protein -
18 Sobic.009G224100 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
19 Sobic.002G140400 plastocyanin-like domain containing protein, putative, expressed -
20 Sobic.004G301000 B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed -


Gene co-expression network
sample Sobic001G288900 Sobic001G288900 Sobic007G165000 Sobic007G165000 Sobic001G288900--Sobic007G165000 Sobic010G132000 Sobic010G132000 Sobic001G288900--Sobic010G132000 Sobic001G039000 Sobic001G039000 Sobic001G288900--Sobic001G039000 Sobic001G270200 Sobic001G270200 Sobic001G288900--Sobic001G270200 Sobic010G271501 Sobic010G271501 Sobic001G288900--Sobic010G271501 Sobic008G009450 Sobic008G009450 Sobic001G288900--Sobic008G009450 Sobic006G240650 Sobic006G240650 Sobic001G288900--Sobic006G240650 Sobic003G258600 Sobic003G258600 Sobic001G288900--Sobic003G258600 Sobic001G044100 Sobic001G044100 Sobic001G288900--Sobic001G044100 Sobic007G165000--Sobic008G009450 Sobic007G165000--Sobic001G288900 Sobic007G165000--Sobic001G270200 Sobic007G165000--Sobic001G044100 Sobic010G088400 Sobic010G088400 Sobic007G165000--Sobic010G088400 Sobic001G015600 Sobic001G015600 Sobic007G165000--Sobic001G015600 Sobic007G165000--Sobic006G240650 Sobic004G133301 Sobic004G133301 Sobic007G165000--Sobic004G133301 Sobic003G125000 Sobic003G125000 Sobic007G165000--Sobic003G125000 Sobic010G132000--Sobic001G039000 Sobic010G132000--Sobic001G288900 Sobic003G367200 Sobic003G367200 Sobic010G132000--Sobic003G367200 Sobic004G336500 Sobic004G336500 Sobic010G132000--Sobic004G336500 Sobic002G347100 Sobic002G347100 Sobic010G132000--Sobic002G347100 Sobic006G249300 Sobic006G249300 Sobic010G132000--Sobic006G249300 Sobic003G138300 Sobic003G138300 Sobic010G132000--Sobic003G138300 Sobic009G229000 Sobic009G229000 Sobic010G132000--Sobic009G229000 Sobic001G309600 Sobic001G309600 Sobic010G132000--Sobic001G309600 Sobic001G039000--Sobic010G132000 Sobic001G039000--Sobic001G288900 Sobic003G315800 Sobic003G315800 Sobic001G039000--Sobic003G315800 Sobic001G039000--Sobic002G347100 Sobic001G039000--Sobic003G258600 Sobic009G200566 Sobic009G200566 Sobic001G039000--Sobic009G200566 Sobic001G039000--Sobic007G165000 Sobic010G213800 Sobic010G213800 Sobic001G039000--Sobic010G213800 Sobic009G176500 Sobic009G176500 Sobic001G039000--Sobic009G176500 Sobic001G270200--Sobic007G165000 Sobic001G270200--Sobic001G044100 Sobic001G270200--Sobic008G009450 Sobic001G364200 Sobic001G364200 Sobic001G270200--Sobic001G364200 Sobic001G270200--Sobic003G125000 Sobic001G393600 Sobic001G393600 Sobic001G270200--Sobic001G393600 Sobic001G270200--Sobic004G133301 Sobic004G072400 Sobic004G072400 Sobic001G270200--Sobic004G072400 Sobic001G270200--Sobic010G088400 Sobic001G389000 Sobic001G389000 Sobic010G271501--Sobic001G389000 Sobic001G325400 Sobic001G325400 Sobic010G271501--Sobic001G325400 Sobic010G252401 Sobic010G252401 Sobic010G271501--Sobic010G252401 Sobic004G046200 Sobic004G046200 Sobic010G271501--Sobic004G046200 Sobic009G111000 Sobic009G111000 Sobic010G271501--Sobic009G111000 Sobic001G500000 Sobic001G500000 Sobic010G271501--Sobic001G500000 Sobic010G184800 Sobic010G184800 Sobic010G271501--Sobic010G184800 Sobic002G245100 Sobic002G245100 Sobic010G271501--Sobic002G245100 Sobic003G319500 Sobic003G319500 Sobic010G271501--Sobic003G319500 Sobic008G009450--Sobic001G044100 Sobic008G009450--Sobic007G165000 Sobic008G009450--Sobic001G015600 Sobic008G009450--Sobic001G270200 Sobic008G009450--Sobic010G088400 Sobic003G161950 Sobic003G161950 Sobic008G009450--Sobic003G161950 Sobic008G009450--Sobic001G393600 Sobic008G009450--Sobic004G133301 Sobic008G009450--Sobic001G364200 Sobic006G240650--Sobic008G009450 Sobic006G240650--Sobic007G165000 Sobic006G240650--Sobic001G288900 Sobic006G240650--Sobic001G270200 Sobic006G240650--Sobic003G161950 Sobic006G240650--Sobic001G364200 Sobic006G240650--Sobic001G044100 Sobic006G240650--Sobic004G133301 Sobic005G161500 Sobic005G161500 Sobic006G240650--Sobic005G161500 Sobic003G258600--Sobic010G132000 Sobic003G297600 Sobic003G297600 Sobic003G258600--Sobic003G297600 Sobic002G183200 Sobic002G183200 Sobic003G258600--Sobic002G183200 Sobic006G161100 Sobic006G161100 Sobic003G258600--Sobic006G161100 Sobic003G382600 Sobic003G382600 Sobic003G258600--Sobic003G382600 Sobic007G177100 Sobic007G177100 Sobic003G258600--Sobic007G177100 Sobic003G258600--Sobic001G039000 Sobic003G334600 Sobic003G334600 Sobic003G258600--Sobic003G334600 Sobic009G075900 Sobic009G075900 Sobic003G258600--Sobic009G075900 Sobic001G044100--Sobic008G009450 Sobic001G044100--Sobic010G088400 Sobic001G044100--Sobic001G015600 Sobic001G044100--Sobic001G393600 Sobic002G156700 Sobic002G156700 Sobic001G044100--Sobic002G156700 Sobic005G183000 Sobic005G183000 Sobic001G044100--Sobic005G183000 Sobic001G044100--Sobic001G270200 Sobic001G044100--Sobic007G165000 Sobic001G044100--Sobic001G364200
Octagon: transcription factors


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