Gene annotation
Transcriptome id Sobic.001G039000.1
Synonym Sb01g003590
Functional annotation DUF567 domain containing protein, putative, expressed
UniProt C5WV56
Pfam PF04525
Panther DB PTHR31087 PTHR31087:SF18
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G01750 : Protein of unknown function (DUF567)
RAP-DB (Rice) LOC_Os03g60210.1 : DUF567 domain containing protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS5A02G471600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G132000 arabinogalactan peptide 23 precursor, putative, expressed -
2 Sobic.001G288900 -(PubMedID : 26976818)@mitochondrial carrier protein, putative, expressed K15109: SLC25A20_29, CACT, CACL, solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29
3 Sobic.003G315800 - -
4 Sobic.002G347100 expressed protein -
5 Sobic.003G258600 expressed protein -
6 Sobic.009G200566 - -
7 Sobic.007G165000 zinc finger, C3HC4 type domain containing protein, expressed -
8 Sobic.010G213800 GDU1, putative, expressed -
9 Sobic.009G176500 similar to Putative uncharacterized protein(PubMedID : 29862293)@harpin-induced protein 1 domain containing protein, expressed -
10 Sobic.003G367200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed K19040: E3 ubiquitin-protein ligase ATL10/75/76/77/78
11 Sobic.001G015600 expressed protein -
12 Sobic.002G355700 histone H3, putative, expressed K11253: histone H3
13 Sobic.003G297600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor 2, putative, expressed -
14 Sobic.004G336500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@OsIAA9 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
15 Sobic.010G271501 - -
16 Sobic.009G164600 ZOS1-14 - C2H2 zinc finger protein, expressed -
17 Sobic.009G231000 - -
18 Sobic.004G159400 hydrolase, NUDIX family, domain containing protein, expressed K07766: diphosphoinositol-polyphosphate diphosphatase
19 Sobic.002G390900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@WD40-like Beta Propeller Repeat family protein, expressed -
20 Sobic.009G179400 expressed protein -


Gene co-expression network
sample Sobic001G039000 Sobic001G039000 Sobic010G132000 Sobic010G132000 Sobic001G039000--Sobic010G132000 Sobic001G288900 Sobic001G288900 Sobic001G039000--Sobic001G288900 Sobic003G315800 Sobic003G315800 Sobic001G039000--Sobic003G315800 Sobic002G347100 Sobic002G347100 Sobic001G039000--Sobic002G347100 Sobic003G258600 Sobic003G258600 Sobic001G039000--Sobic003G258600 Sobic009G200566 Sobic009G200566 Sobic001G039000--Sobic009G200566 Sobic007G165000 Sobic007G165000 Sobic001G039000--Sobic007G165000 Sobic010G213800 Sobic010G213800 Sobic001G039000--Sobic010G213800 Sobic009G176500 Sobic009G176500 Sobic001G039000--Sobic009G176500 Sobic010G132000--Sobic001G039000 Sobic010G132000--Sobic001G288900 Sobic003G367200 Sobic003G367200 Sobic010G132000--Sobic003G367200 Sobic004G336500 Sobic004G336500 Sobic010G132000--Sobic004G336500 Sobic010G132000--Sobic002G347100 Sobic006G249300 Sobic006G249300 Sobic010G132000--Sobic006G249300 Sobic003G138300 Sobic003G138300 Sobic010G132000--Sobic003G138300 Sobic009G229000 Sobic009G229000 Sobic010G132000--Sobic009G229000 Sobic001G309600 Sobic001G309600 Sobic010G132000--Sobic001G309600 Sobic001G288900--Sobic007G165000 Sobic001G288900--Sobic010G132000 Sobic001G288900--Sobic001G039000 Sobic001G270200 Sobic001G270200 Sobic001G288900--Sobic001G270200 Sobic010G271501 Sobic010G271501 Sobic001G288900--Sobic010G271501 Sobic008G009450 Sobic008G009450 Sobic001G288900--Sobic008G009450 Sobic006G240650 Sobic006G240650 Sobic001G288900--Sobic006G240650 Sobic001G288900--Sobic003G258600 Sobic001G044100 Sobic001G044100 Sobic001G288900--Sobic001G044100 Sobic002G398400 Sobic002G398400 Sobic003G315800--Sobic002G398400 Sobic003G315800--Sobic001G039000 Sobic004G232500 Sobic004G232500 Sobic003G315800--Sobic004G232500 Sobic002G237500 Sobic002G237500 Sobic003G315800--Sobic002G237500 Sobic008G188400 Sobic008G188400 Sobic003G315800--Sobic008G188400 Sobic001G015600 Sobic001G015600 Sobic003G315800--Sobic001G015600 Sobic008G040400 Sobic008G040400 Sobic003G315800--Sobic008G040400 Sobic007G012300 Sobic007G012300 Sobic003G315800--Sobic007G012300 Sobic009G118100 Sobic009G118100 Sobic003G315800--Sobic009G118100 Sobic001G430600 Sobic001G430600 Sobic002G347100--Sobic001G430600 Sobic007G166000 Sobic007G166000 Sobic002G347100--Sobic007G166000 Sobic003G202000 Sobic003G202000 Sobic002G347100--Sobic003G202000 Sobic002G347100--Sobic010G132000 Sobic001G481500 Sobic001G481500 Sobic002G347100--Sobic001G481500 Sobic002G215300 Sobic002G215300 Sobic002G347100--Sobic002G215300 Sobic002G347100--Sobic003G367200 Sobic002G057900 Sobic002G057900 Sobic002G347100--Sobic002G057900 Sobic002G203700 Sobic002G203700 Sobic002G347100--Sobic002G203700 Sobic003G258600--Sobic010G132000 Sobic003G297600 Sobic003G297600 Sobic003G258600--Sobic003G297600 Sobic002G183200 Sobic002G183200 Sobic003G258600--Sobic002G183200 Sobic006G161100 Sobic006G161100 Sobic003G258600--Sobic006G161100 Sobic003G382600 Sobic003G382600 Sobic003G258600--Sobic003G382600 Sobic007G177100 Sobic007G177100 Sobic003G258600--Sobic007G177100 Sobic003G258600--Sobic001G039000 Sobic003G334600 Sobic003G334600 Sobic003G258600--Sobic003G334600 Sobic009G075900 Sobic009G075900 Sobic003G258600--Sobic009G075900 Sobic009G145700 Sobic009G145700 Sobic009G200566--Sobic009G145700 Sobic009G145600 Sobic009G145600 Sobic009G200566--Sobic009G145600 Sobic001G112200 Sobic001G112200 Sobic009G200566--Sobic001G112200 Sobic008G158800 Sobic008G158800 Sobic009G200566--Sobic008G158800 Sobic008G066401 Sobic008G066401 Sobic009G200566--Sobic008G066401 Sobic009G184100 Sobic009G184100 Sobic009G200566--Sobic009G184100 Sobic004G245700 Sobic004G245700 Sobic009G200566--Sobic004G245700 Sobic008G066200 Sobic008G066200 Sobic009G200566--Sobic008G066200 Sobic002G055700 Sobic002G055700 Sobic009G200566--Sobic002G055700 Sobic007G165000--Sobic008G009450 Sobic007G165000--Sobic001G288900 Sobic007G165000--Sobic001G270200 Sobic007G165000--Sobic001G044100 Sobic010G088400 Sobic010G088400 Sobic007G165000--Sobic010G088400 Sobic007G165000--Sobic001G015600 Sobic007G165000--Sobic006G240650 Sobic004G133301 Sobic004G133301 Sobic007G165000--Sobic004G133301 Sobic003G125000 Sobic003G125000 Sobic007G165000--Sobic003G125000 Sobic010G213800--Sobic003G367200 Sobic002G224500 Sobic002G224500 Sobic010G213800--Sobic002G224500 Sobic010G213800--Sobic004G336500 Sobic010G213800--Sobic001G112200 Sobic002G389400 Sobic002G389400 Sobic010G213800--Sobic002G389400 Sobic002G261100 Sobic002G261100 Sobic010G213800--Sobic002G261100 Sobic010G198600 Sobic010G198600 Sobic010G213800--Sobic010G198600 Sobic010G213800--Sobic009G200566 Sobic001G279300 Sobic001G279300 Sobic010G213800--Sobic001G279300 Sobic004G315000 Sobic004G315000 Sobic009G176500--Sobic004G315000 Sobic010G216400 Sobic010G216400 Sobic009G176500--Sobic010G216400 Sobic006G224000 Sobic006G224000 Sobic009G176500--Sobic006G224000 Sobic001G282900 Sobic001G282900 Sobic009G176500--Sobic001G282900 Sobic004G159400 Sobic004G159400 Sobic009G176500--Sobic004G159400 Sobic002G227300 Sobic002G227300 Sobic009G176500--Sobic002G227300 Sobic002G220100 Sobic002G220100 Sobic009G176500--Sobic002G220100 Sobic001G508466 Sobic001G508466 Sobic009G176500--Sobic001G508466 Sobic008G006300 Sobic008G006300 Sobic009G176500--Sobic008G006300
Octagon: transcription factors


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