Gene annotation
Transcriptome id Sobic.002G347100.2
Synonym Sb02g036970
Functional annotation expressed protein
UniProt A0A1W0W716
Pfam -
Panther DB PTHR33165 PTHR33165:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g39000.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G430600 cytochrome P450, putative, expressed -
2 Sobic.007G166000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@regulation of Al tolerance genes and proton tolerance genes(PubMedID : 29541086)@ZOS8-14 - C2H2 zinc finger protein, expressed -
3 Sobic.003G202000 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR16 - Auxin-responsive SAUR gene family member, expressed -
4 Sobic.010G132000 arabinogalactan peptide 23 precursor, putative, expressed -
5 Sobic.001G481500 - -
6 Sobic.002G215300 expressed protein -
7 Sobic.003G367200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed K19040: E3 ubiquitin-protein ligase ATL10/75/76/77/78
8 Sobic.002G057900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@thioredoxin, putative, expressed K03671: thioredoxin 1
9 Sobic.002G203700 hypothetical protein -
10 Sobic.001G325000 expressed protein -
11 Sobic.009G231000 - -
12 Sobic.009G217700 - -
13 Sobic.008G050500 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
14 Sobic.001G525200 expressed protein -
15 Sobic.001G449600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Oxygen binding /transporter (Zm)(PubMedID : 27208977)@Oxygen binding /transporter (Zm)(PubMedID : 27208977)@non-symbiotic hemoglobin 2, putative, expressed -
16 Sobic.001G039000 DUF567 domain containing protein, putative, expressed -
17 Sobic.002G347500 expressed protein -
18 Sobic.010G032100 Decreased expression in phyB-1 mutant(PubMedID : 26893475)@early nodulin 93 ENOD93 protein, putative, expressed -
19 Sobic.003G138300 expressed protein -
20 Sobic.001G115300 RNA recognition motif containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G347100 Sobic002G347100 Sobic001G430600 Sobic001G430600 Sobic002G347100--Sobic001G430600 Sobic007G166000 Sobic007G166000 Sobic002G347100--Sobic007G166000 Sobic003G202000 Sobic003G202000 Sobic002G347100--Sobic003G202000 Sobic010G132000 Sobic010G132000 Sobic002G347100--Sobic010G132000 Sobic001G481500 Sobic001G481500 Sobic002G347100--Sobic001G481500 Sobic002G215300 Sobic002G215300 Sobic002G347100--Sobic002G215300 Sobic003G367200 Sobic003G367200 Sobic002G347100--Sobic003G367200 Sobic002G057900 Sobic002G057900 Sobic002G347100--Sobic002G057900 Sobic002G203700 Sobic002G203700 Sobic002G347100--Sobic002G203700 Sobic001G430600--Sobic002G347100 Sobic001G430600--Sobic007G166000 Sobic008G050500 Sobic008G050500 Sobic001G430600--Sobic008G050500 Sobic002G248201 Sobic002G248201 Sobic001G430600--Sobic002G248201 Sobic001G430600--Sobic001G481500 Sobic010G032100 Sobic010G032100 Sobic001G430600--Sobic010G032100 Sobic001G430600--Sobic003G202000 Sobic001G525200 Sobic001G525200 Sobic001G430600--Sobic001G525200 Sobic005G005600 Sobic005G005600 Sobic001G430600--Sobic005G005600 Sobic001G449600 Sobic001G449600 Sobic007G166000--Sobic001G449600 Sobic009G164600 Sobic009G164600 Sobic007G166000--Sobic009G164600 Sobic007G166000--Sobic005G005600 Sobic009G139700 Sobic009G139700 Sobic007G166000--Sobic009G139700 Sobic010G259600 Sobic010G259600 Sobic007G166000--Sobic010G259600 Sobic006G143400 Sobic006G143400 Sobic007G166000--Sobic006G143400 Sobic009G217700 Sobic009G217700 Sobic007G166000--Sobic009G217700 Sobic009G231000 Sobic009G231000 Sobic007G166000--Sobic009G231000 Sobic007G005700 Sobic007G005700 Sobic007G166000--Sobic007G005700 Sobic003G202000--Sobic009G217700 Sobic003G202000--Sobic001G449600 Sobic002G034800 Sobic002G034800 Sobic003G202000--Sobic002G034800 Sobic005G013600 Sobic005G013600 Sobic003G202000--Sobic005G013600 Sobic003G255200 Sobic003G255200 Sobic003G202000--Sobic003G255200 Sobic003G319700 Sobic003G319700 Sobic003G202000--Sobic003G319700 Sobic004G107700 Sobic004G107700 Sobic003G202000--Sobic004G107700 Sobic003G364000 Sobic003G364000 Sobic003G202000--Sobic003G364000 Sobic003G255500 Sobic003G255500 Sobic003G202000--Sobic003G255500 Sobic001G039000 Sobic001G039000 Sobic010G132000--Sobic001G039000 Sobic001G288900 Sobic001G288900 Sobic010G132000--Sobic001G288900 Sobic010G132000--Sobic003G367200 Sobic004G336500 Sobic004G336500 Sobic010G132000--Sobic004G336500 Sobic010G132000--Sobic002G347100 Sobic006G249300 Sobic006G249300 Sobic010G132000--Sobic006G249300 Sobic003G138300 Sobic003G138300 Sobic010G132000--Sobic003G138300 Sobic009G229000 Sobic009G229000 Sobic010G132000--Sobic009G229000 Sobic001G309600 Sobic001G309600 Sobic010G132000--Sobic001G309600 Sobic001G481500--Sobic001G309600 Sobic006G032700 Sobic006G032700 Sobic001G481500--Sobic006G032700 Sobic001G397200 Sobic001G397200 Sobic001G481500--Sobic001G397200 Sobic001G481500--Sobic010G032100 Sobic001G149800 Sobic001G149800 Sobic001G481500--Sobic001G149800 Sobic001G481500--Sobic003G138300 Sobic003G086600 Sobic003G086600 Sobic001G481500--Sobic003G086600 Sobic001G481500--Sobic002G215300 Sobic002G068600 Sobic002G068600 Sobic001G481500--Sobic002G068600 Sobic010G031100 Sobic010G031100 Sobic002G215300--Sobic010G031100 Sobic002G215300--Sobic003G138300 Sobic002G215300--Sobic001G309600 Sobic002G215300--Sobic001G149800 Sobic002G215300--Sobic010G032100 Sobic002G215300--Sobic006G032700 Sobic002G215300--Sobic001G481500 Sobic010G031300 Sobic010G031300 Sobic002G215300--Sobic010G031300 Sobic003G394400 Sobic003G394400 Sobic002G215300--Sobic003G394400 Sobic003G367200--Sobic004G336500 Sobic006G275200 Sobic006G275200 Sobic003G367200--Sobic006G275200 Sobic003G367200--Sobic003G086600 Sobic003G382800 Sobic003G382800 Sobic003G367200--Sobic003G382800 Sobic003G367200--Sobic001G397200 Sobic004G280200 Sobic004G280200 Sobic003G367200--Sobic004G280200 Sobic007G015600 Sobic007G015600 Sobic003G367200--Sobic007G015600 Sobic001G140900 Sobic001G140900 Sobic003G367200--Sobic001G140900 Sobic003G369100 Sobic003G369100 Sobic003G367200--Sobic003G369100 Sobic001G097600 Sobic001G097600 Sobic002G057900--Sobic001G097600 Sobic002G057900--Sobic002G203700 Sobic007G057000 Sobic007G057000 Sobic002G057900--Sobic007G057000 Sobic002G057900--Sobic002G034800 Sobic003G240600 Sobic003G240600 Sobic002G057900--Sobic003G240600 Sobic002G057900--Sobic003G319700 Sobic002G414600 Sobic002G414600 Sobic002G057900--Sobic002G414600 Sobic002G415100 Sobic002G415100 Sobic002G057900--Sobic002G415100 Sobic010G066700 Sobic010G066700 Sobic002G057900--Sobic010G066700 Sobic003G156200 Sobic003G156200 Sobic002G203700--Sobic003G156200 Sobic003G301600 Sobic003G301600 Sobic002G203700--Sobic003G301600 Sobic004G313100 Sobic004G313100 Sobic002G203700--Sobic004G313100 Sobic005G183100 Sobic005G183100 Sobic002G203700--Sobic005G183100 Sobic002G203700--Sobic002G057900 Sobic001G317000 Sobic001G317000 Sobic002G203700--Sobic001G317000 Sobic002G203700--Sobic002G034800 Sobic002G329800 Sobic002G329800 Sobic002G203700--Sobic002G329800 Sobic010G213700 Sobic010G213700 Sobic002G203700--Sobic010G213700
Octagon: transcription factors


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