Gene annotation
Transcriptome id Sobic.002G057900.2
Synonym ATTRX1, ATTRXH1, Sb02g004850, TRX1
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
thioredoxin, putative, expressed
UniProt A0A1W0W2G8
Pfam PF13899
Panther DB PTHR10438 PTHR10438:SF274
NCBI CDD KOG0907; Thioredoxin
KEGG Orthology K03671; thioredoxin 1
Gene Ontology GO:0015035; protein disulfide oxidoreductase activity GO:0006662glycerol ether metabolic process


Orthologs (automatic annotation)
TAIR AT3G51030 : thioredoxin H-type 1
RAP-DB (Rice) LOC_Os07g08840.1 : thioredoxin, putative, expressed
MaizeGDB (Corn) Zm00025a016066
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G057900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G097600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@"salidroside biosynthesis, ethanol degradation II, phytol degradation"(PubMedID : 21853065)@dehydrogenase, putative, expressed K18857: alcohol dehydrogenase class-P
2 Sobic.002G203700 hypothetical protein -
3 Sobic.007G057000 expressed protein -
4 Sobic.002G034800 - -
5 Sobic.003G240600 VQ domain containing protein, putative, expressed -
6 Sobic.003G319700 NADPH-dependent FMN reductase domain containing protein, expressed K03809: NAD(P)H dehydrogenase (quinone)
7 Sobic.002G414600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@hypoxia-responsive family protein, putative, expressed -
8 Sobic.002G415100 POEI50 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
9 Sobic.010G066700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein anthranilate N-benzoyltransferase protein 1 (Os)(PubMedID : 27208977)@transferase family protein, putative, expressed -
10 Sobic.001G317000 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
11 Sobic.009G217700 - -
12 Sobic.009G183400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -
13 Sobic.001G119400 microsomal glutathione S-transferase 3, putative, expressed K00799: GST, glutathione S-transferase
14 Sobic.007G025500 amino acid transporter, putative, expressed -
15 Sobic.004G217800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ammonium transporter protein, putative, expressed K03320: amt, AMT, ammonium transporter, Amt family
16 Sobic.005G103300 dehydrogenase, putative, expressed K18857: alcohol dehydrogenase class-P
17 Sobic.001G325000 expressed protein -
18 Sobic.002G261000 expressed protein -
19 Sobic.010G136000 expressed protein -
20 Sobic.003G426100 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase


Gene co-expression network
sample Sobic002G057900 Sobic002G057900 Sobic001G097600 Sobic001G097600 Sobic002G057900--Sobic001G097600 Sobic002G203700 Sobic002G203700 Sobic002G057900--Sobic002G203700 Sobic007G057000 Sobic007G057000 Sobic002G057900--Sobic007G057000 Sobic002G034800 Sobic002G034800 Sobic002G057900--Sobic002G034800 Sobic003G240600 Sobic003G240600 Sobic002G057900--Sobic003G240600 Sobic003G319700 Sobic003G319700 Sobic002G057900--Sobic003G319700 Sobic002G414600 Sobic002G414600 Sobic002G057900--Sobic002G414600 Sobic002G415100 Sobic002G415100 Sobic002G057900--Sobic002G415100 Sobic010G066700 Sobic010G066700 Sobic002G057900--Sobic010G066700 Sobic009G183400 Sobic009G183400 Sobic001G097600--Sobic009G183400 Sobic006G275200 Sobic006G275200 Sobic001G097600--Sobic006G275200 Sobic001G097600--Sobic002G414600 Sobic001G317000 Sobic001G317000 Sobic001G097600--Sobic001G317000 Sobic003G367200 Sobic003G367200 Sobic001G097600--Sobic003G367200 Sobic001G038900 Sobic001G038900 Sobic001G097600--Sobic001G038900 Sobic001G119400 Sobic001G119400 Sobic001G097600--Sobic001G119400 Sobic004G216600 Sobic004G216600 Sobic001G097600--Sobic004G216600 Sobic008G136400 Sobic008G136400 Sobic001G097600--Sobic008G136400 Sobic003G156200 Sobic003G156200 Sobic002G203700--Sobic003G156200 Sobic003G301600 Sobic003G301600 Sobic002G203700--Sobic003G301600 Sobic004G313100 Sobic004G313100 Sobic002G203700--Sobic004G313100 Sobic005G183100 Sobic005G183100 Sobic002G203700--Sobic005G183100 Sobic002G203700--Sobic002G057900 Sobic002G203700--Sobic001G317000 Sobic002G203700--Sobic002G034800 Sobic002G329800 Sobic002G329800 Sobic002G203700--Sobic002G329800 Sobic010G213700 Sobic010G213700 Sobic002G203700--Sobic010G213700 Sobic007G057000--Sobic010G066700 Sobic002G188900 Sobic002G188900 Sobic007G057000--Sobic002G188900 Sobic007G057000--Sobic009G183400 Sobic004G304625 Sobic004G304625 Sobic007G057000--Sobic004G304625 Sobic007G057000--Sobic001G119400 Sobic007G155100 Sobic007G155100 Sobic007G057000--Sobic007G155100 Sobic001G423800 Sobic001G423800 Sobic007G057000--Sobic001G423800 Sobic003G033900 Sobic003G033900 Sobic007G057000--Sobic003G033900 Sobic004G100700 Sobic004G100700 Sobic007G057000--Sobic004G100700 Sobic002G034800--Sobic010G066700 Sobic009G139400 Sobic009G139400 Sobic002G034800--Sobic009G139400 Sobic004G107700 Sobic004G107700 Sobic002G034800--Sobic004G107700 Sobic003G280200 Sobic003G280200 Sobic002G034800--Sobic003G280200 Sobic009G077800 Sobic009G077800 Sobic002G034800--Sobic009G077800 Sobic003G255200 Sobic003G255200 Sobic002G034800--Sobic003G255200 Sobic002G034800--Sobic001G119400 Sobic002G034800--Sobic009G183400 Sobic010G259600 Sobic010G259600 Sobic002G034800--Sobic010G259600 Sobic001G317200 Sobic001G317200 Sobic003G240600--Sobic001G317200 Sobic001G325000 Sobic001G325000 Sobic003G240600--Sobic001G325000 Sobic006G084600 Sobic006G084600 Sobic003G240600--Sobic006G084600 Sobic001G348700 Sobic001G348700 Sobic003G240600--Sobic001G348700 Sobic003G240600--Sobic004G216600 Sobic003G252800 Sobic003G252800 Sobic003G240600--Sobic003G252800 Sobic003G317100 Sobic003G317100 Sobic003G240600--Sobic003G317100 Sobic003G240600--Sobic002G414600 Sobic003G437200 Sobic003G437200 Sobic003G240600--Sobic003G437200 Sobic009G217700 Sobic009G217700 Sobic003G319700--Sobic009G217700 Sobic005G005600 Sobic005G005600 Sobic003G319700--Sobic005G005600 Sobic001G449600 Sobic001G449600 Sobic003G319700--Sobic001G449600 Sobic001G433900 Sobic001G433900 Sobic003G319700--Sobic001G433900 Sobic003G364000 Sobic003G364000 Sobic003G319700--Sobic003G364000 Sobic010G088700 Sobic010G088700 Sobic003G319700--Sobic010G088700 Sobic003G319700--Sobic002G034800 Sobic003G319700--Sobic007G057000 Sobic003G319700--Sobic002G057900 Sobic001G252300 Sobic001G252300 Sobic002G414600--Sobic001G252300 Sobic002G414600--Sobic009G183400 Sobic002G414600--Sobic001G097600 Sobic002G393000 Sobic002G393000 Sobic002G414600--Sobic002G393000 Sobic002G414600--Sobic001G119400 Sobic009G008900 Sobic009G008900 Sobic002G414600--Sobic009G008900 Sobic005G051200 Sobic005G051200 Sobic002G414600--Sobic005G051200 Sobic006G173900 Sobic006G173900 Sobic002G414600--Sobic006G173900 Sobic002G414600--Sobic006G275200 Sobic010G239300 Sobic010G239300 Sobic002G415100--Sobic010G239300 Sobic002G415100--Sobic003G280200 Sobic009G128700 Sobic009G128700 Sobic002G415100--Sobic009G128700 Sobic002G415100--Sobic001G317200 Sobic003G297600 Sobic003G297600 Sobic002G415100--Sobic003G297600 Sobic002G415100--Sobic010G213700 Sobic002G415100--Sobic002G034800 Sobic009G231000 Sobic009G231000 Sobic002G415100--Sobic009G231000 Sobic002G415100--Sobic003G156200 Sobic010G066700--Sobic007G057000 Sobic010G066700--Sobic009G139400 Sobic010G066700--Sobic007G155100 Sobic010G136000 Sobic010G136000 Sobic010G066700--Sobic010G136000 Sobic010G066700--Sobic002G034800 Sobic010G066700--Sobic001G119400 Sobic003G382600 Sobic003G382600 Sobic010G066700--Sobic003G382600 Sobic007G155000 Sobic007G155000 Sobic010G066700--Sobic007G155000 Sobic010G066700--Sobic001G038900
Octagon: transcription factors


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