Gene annotation
Transcriptome id Sobic.001G202700.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6QJY7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g58000.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G325600 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
2 Sobic.009G187000 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
3 Sobic.001G428700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
4 Sobic.002G339400 expressed protein -
5 Sobic.006G046200 - -
6 Sobic.010G087200 expressed protein -
7 Sobic.001G494150 - -
8 Sobic.006G123000 WD domain, G-beta repeat domain containing protein, expressed -
9 Sobic.005G230700 SCARECROW, putative, expressed -
10 Sobic.001G397600 expressed protein -
11 Sobic.004G262900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.006G166700 plastocyanin-like domain containing protein, putative, expressed -
13 Sobic.003G371900 ubiquitin fusion degradation protein, putative, expressed K14016: ubiquitin fusion degradation protein 1
14 Sobic.010G014300 expressed protein -
15 Sobic.010G259200 harpin-induced protein 1 domain containing protein, expressed -
16 Sobic.005G080100 - -
17 Sobic.003G293700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
18 Sobic.010G002900 NAC domain containing protein, putative, expressed -
19 Sobic.002G366700 expressed protein -
20 Sobic.007G206700 lectin-like protein kinase, putative, expressed -


Gene co-expression network
sample Sobic001G202700 Sobic001G202700 Sobic001G325600 Sobic001G325600 Sobic001G202700--Sobic001G325600 Sobic009G187000 Sobic009G187000 Sobic001G202700--Sobic009G187000 Sobic001G428700 Sobic001G428700 Sobic001G202700--Sobic001G428700 Sobic002G339400 Sobic002G339400 Sobic001G202700--Sobic002G339400 Sobic006G046200 Sobic006G046200 Sobic001G202700--Sobic006G046200 Sobic010G087200 Sobic010G087200 Sobic001G202700--Sobic010G087200 Sobic001G494150 Sobic001G494150 Sobic001G202700--Sobic001G494150 Sobic006G123000 Sobic006G123000 Sobic001G202700--Sobic006G123000 Sobic005G230700 Sobic005G230700 Sobic001G202700--Sobic005G230700 Sobic002G387400 Sobic002G387400 Sobic001G325600--Sobic002G387400 Sobic001G325600--Sobic001G202700 Sobic003G293700 Sobic003G293700 Sobic001G325600--Sobic003G293700 Sobic002G196900 Sobic002G196900 Sobic001G325600--Sobic002G196900 Sobic008G165800 Sobic008G165800 Sobic001G325600--Sobic008G165800 Sobic005G096600 Sobic005G096600 Sobic001G325600--Sobic005G096600 Sobic010G131950 Sobic010G131950 Sobic001G325600--Sobic010G131950 Sobic008G095000 Sobic008G095000 Sobic001G325600--Sobic008G095000 Sobic001G212800 Sobic001G212800 Sobic001G325600--Sobic001G212800 Sobic007G206700 Sobic007G206700 Sobic009G187000--Sobic007G206700 Sobic010G259200 Sobic010G259200 Sobic009G187000--Sobic010G259200 Sobic002G001300 Sobic002G001300 Sobic009G187000--Sobic002G001300 Sobic010G119600 Sobic010G119600 Sobic009G187000--Sobic010G119600 Sobic003G083700 Sobic003G083700 Sobic009G187000--Sobic003G083700 Sobic009G187000--Sobic010G087200 Sobic004G128800 Sobic004G128800 Sobic009G187000--Sobic004G128800 Sobic008G136900 Sobic008G136900 Sobic009G187000--Sobic008G136900 Sobic010G002850 Sobic010G002850 Sobic009G187000--Sobic010G002850 Sobic001G428700--Sobic010G087200 Sobic001G428700--Sobic001G494150 Sobic001G428700--Sobic002G339400 Sobic010G014300 Sobic010G014300 Sobic001G428700--Sobic010G014300 Sobic001G428700--Sobic002G001300 Sobic006G166700 Sobic006G166700 Sobic001G428700--Sobic006G166700 Sobic002G366700 Sobic002G366700 Sobic001G428700--Sobic002G366700 Sobic001G428700--Sobic010G259200 Sobic002G348900 Sobic002G348900 Sobic001G428700--Sobic002G348900 Sobic002G339400--Sobic002G366700 Sobic002G339400--Sobic001G494150 Sobic002G339400--Sobic010G087200 Sobic002G339400--Sobic001G428700 Sobic004G288400 Sobic004G288400 Sobic002G339400--Sobic004G288400 Sobic002G339400--Sobic010G014300 Sobic006G075700 Sobic006G075700 Sobic002G339400--Sobic006G075700 Sobic002G339400--Sobic006G166700 Sobic002G339400--Sobic010G259200 Sobic004G335200 Sobic004G335200 Sobic006G046200--Sobic004G335200 Sobic009G076000 Sobic009G076000 Sobic006G046200--Sobic009G076000 Sobic001G391800 Sobic001G391800 Sobic006G046200--Sobic001G391800 Sobic002G358200 Sobic002G358200 Sobic006G046200--Sobic002G358200 Sobic002G006001 Sobic002G006001 Sobic006G046200--Sobic002G006001 Sobic009G205900 Sobic009G205900 Sobic006G046200--Sobic009G205900 Sobic001G288200 Sobic001G288200 Sobic006G046200--Sobic001G288200 Sobic002G417201 Sobic002G417201 Sobic006G046200--Sobic002G417201 Sobic001G423000 Sobic001G423000 Sobic006G046200--Sobic001G423000 Sobic010G087200--Sobic002G001300 Sobic010G087200--Sobic010G259200 Sobic010G087200--Sobic007G206700 Sobic010G087200--Sobic001G428700 Sobic010G087200--Sobic010G014300 Sobic010G087200--Sobic001G494150 Sobic010G087200--Sobic006G166700 Sobic010G087200--Sobic010G119600 Sobic010G087200--Sobic002G366700 Sobic001G494150--Sobic006G075700 Sobic001G494150--Sobic010G259200 Sobic001G494150--Sobic010G119600 Sobic009G236500 Sobic009G236500 Sobic001G494150--Sobic009G236500 Sobic001G494150--Sobic002G001300 Sobic001G494150--Sobic002G366700 Sobic001G494150--Sobic010G002850 Sobic001G494150--Sobic010G087200 Sobic005G156700 Sobic005G156700 Sobic001G494150--Sobic005G156700 Sobic006G123000--Sobic009G187000 Sobic006G278600 Sobic006G278600 Sobic006G123000--Sobic006G278600 Sobic006G123000--Sobic007G206700 Sobic005G098200 Sobic005G098200 Sobic006G123000--Sobic005G098200 Sobic006G123000--Sobic002G001300 Sobic006G123000--Sobic001G494150 Sobic006G123000--Sobic003G083700 Sobic007G076800 Sobic007G076800 Sobic006G123000--Sobic007G076800 Sobic006G123000--Sobic008G136900 Sobic001G027400 Sobic001G027400 Sobic005G230700--Sobic001G027400 Sobic003G371900 Sobic003G371900 Sobic005G230700--Sobic003G371900 Sobic001G174300 Sobic001G174300 Sobic005G230700--Sobic001G174300 Sobic002G202200 Sobic002G202200 Sobic005G230700--Sobic002G202200 Sobic001G006900 Sobic001G006900 Sobic005G230700--Sobic001G006900 Sobic009G027550 Sobic009G027550 Sobic005G230700--Sobic009G027550 Sobic008G134000 Sobic008G134000 Sobic005G230700--Sobic008G134000 Sobic004G108900 Sobic004G108900 Sobic005G230700--Sobic004G108900 Sobic007G124800 Sobic007G124800 Sobic005G230700--Sobic007G124800
Octagon: transcription factors


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