Gene annotation
Transcriptome id Sobic.005G075900.1
Synonym Sb05g006210
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
C1-like domain containing protein, expressed
UniProt A0A1B6PQS0
Pfam PF07649
Panther DB PTHR13871 PTHR13871:SF51
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G16050 : Cysteine/Histidine-rich C1 domain family protein
RAP-DB (Rice) LOC_Os08g31250.1 : C1-like domain containing protein, expressed
MaizeGDB (Corn) Zm00025a029594
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G099600 expressed protein -
2 Sobic.007G156700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
3 Sobic.001G437000 ACT domain containing protein, expressed -
4 Sobic.002G245900 AGC_PVPK_like_CDK8.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
5 Sobic.001G219200 myb-related protein Myb4, putative, expressed K09422: transcription factor MYB, plant
6 Sobic.002G278500 nodulin, putative, expressed -
7 Sobic.005G122500 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@IQ calmodulin-binding and BAG domain containing protein, putative, expressed -
8 Sobic.002G140300 plastocyanin-like domain containing protein, putative, expressed -
9 Sobic.001G440200 senescence-associated protein, putative, expressed -
10 Sobic.001G035100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@ZOS3-21 - C2H2 zinc finger protein, expressed -
11 Sobic.006G179500 protein kinase APK1B, chloroplast precursor, putative, expressed -
12 Sobic.006G165100 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
13 Sobic.002G348900 cytochrome P450, putative, expressed -
14 Sobic.001G471200 membrane protein, putative, expressed -
15 Sobic.004G087100 UDP-glucoronosyl and UDP-glucosyl transferase, putative, expressed -
16 Sobic.003G324400 Not investigated(PubMedID : 23766026)@Contribute to rice salt tolerance under a salt inducible abscisic acid 2 (ABA2) promoter(PubMedID : 28393269)@AP2 domain containing protein, expressed -
17 Sobic.002G050900 uncharacterized protein At4g06744 precursor, putative, expressed -
18 Sobic.001G080100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.001G441100 immediate-early fungal elicitor protein CMPG1, putative, expressed -
20 Sobic.006G183400 OsRhmbd11 - Putative Rhomboid homologue, expressed -


Gene co-expression network
sample Sobic005G075900 Sobic005G075900 Sobic010G099600 Sobic010G099600 Sobic005G075900--Sobic010G099600 Sobic007G156700 Sobic007G156700 Sobic005G075900--Sobic007G156700 Sobic001G437000 Sobic001G437000 Sobic005G075900--Sobic001G437000 Sobic002G245900 Sobic002G245900 Sobic005G075900--Sobic002G245900 Sobic001G219200 Sobic001G219200 Sobic005G075900--Sobic001G219200 Sobic002G278500 Sobic002G278500 Sobic005G075900--Sobic002G278500 Sobic005G122500 Sobic005G122500 Sobic005G075900--Sobic005G122500 Sobic002G140300 Sobic002G140300 Sobic005G075900--Sobic002G140300 Sobic001G440200 Sobic001G440200 Sobic005G075900--Sobic001G440200 Sobic010G099600--Sobic005G075900 Sobic002G339400 Sobic002G339400 Sobic010G099600--Sobic002G339400 Sobic002G311400 Sobic002G311400 Sobic010G099600--Sobic002G311400 Sobic001G428700 Sobic001G428700 Sobic010G099600--Sobic001G428700 Sobic004G288400 Sobic004G288400 Sobic010G099600--Sobic004G288400 Sobic004G202000 Sobic004G202000 Sobic010G099600--Sobic004G202000 Sobic006G157200 Sobic006G157200 Sobic010G099600--Sobic006G157200 Sobic006G166700 Sobic006G166700 Sobic010G099600--Sobic006G166700 Sobic002G348900 Sobic002G348900 Sobic010G099600--Sobic002G348900 Sobic004G308900 Sobic004G308900 Sobic007G156700--Sobic004G308900 Sobic002G358300 Sobic002G358300 Sobic007G156700--Sobic002G358300 Sobic007G122800 Sobic007G122800 Sobic007G156700--Sobic007G122800 Sobic003G323201 Sobic003G323201 Sobic007G156700--Sobic003G323201 Sobic002G269100 Sobic002G269100 Sobic007G156700--Sobic002G269100 Sobic004G169200 Sobic004G169200 Sobic007G156700--Sobic004G169200 Sobic004G191400 Sobic004G191400 Sobic007G156700--Sobic004G191400 Sobic004G246600 Sobic004G246600 Sobic007G156700--Sobic004G246600 Sobic001G195200 Sobic001G195200 Sobic007G156700--Sobic001G195200 Sobic006G165100 Sobic006G165100 Sobic001G437000--Sobic006G165100 Sobic008G177800 Sobic008G177800 Sobic001G437000--Sobic008G177800 Sobic006G194000 Sobic006G194000 Sobic001G437000--Sobic006G194000 Sobic009G073300 Sobic009G073300 Sobic001G437000--Sobic009G073300 Sobic006G231100 Sobic006G231100 Sobic001G437000--Sobic006G231100 Sobic009G027900 Sobic009G027900 Sobic001G437000--Sobic009G027900 Sobic001G338600 Sobic001G338600 Sobic001G437000--Sobic001G338600 Sobic002G282300 Sobic002G282300 Sobic001G437000--Sobic002G282300 Sobic001G437000--Sobic002G278500 Sobic009G008300 Sobic009G008300 Sobic002G245900--Sobic009G008300 Sobic007G133600 Sobic007G133600 Sobic002G245900--Sobic007G133600 Sobic010G067300 Sobic010G067300 Sobic002G245900--Sobic010G067300 Sobic001G076800 Sobic001G076800 Sobic002G245900--Sobic001G076800 Sobic004G335600 Sobic004G335600 Sobic002G245900--Sobic004G335600 Sobic004G042700 Sobic004G042700 Sobic002G245900--Sobic004G042700 Sobic004G099500 Sobic004G099500 Sobic002G245900--Sobic004G099500 Sobic001G239400 Sobic001G239400 Sobic002G245900--Sobic001G239400 Sobic009G032700 Sobic009G032700 Sobic002G245900--Sobic009G032700 Sobic004G108200 Sobic004G108200 Sobic001G219200--Sobic004G108200 Sobic004G004500 Sobic004G004500 Sobic001G219200--Sobic004G004500 Sobic001G256700 Sobic001G256700 Sobic001G219200--Sobic001G256700 Sobic003G148300 Sobic003G148300 Sobic001G219200--Sobic003G148300 Sobic002G339000 Sobic002G339000 Sobic001G219200--Sobic002G339000 Sobic006G207100 Sobic006G207100 Sobic001G219200--Sobic006G207100 Sobic004G219800 Sobic004G219800 Sobic001G219200--Sobic004G219800 Sobic009G144700 Sobic009G144700 Sobic001G219200--Sobic009G144700 Sobic008G187001 Sobic008G187001 Sobic001G219200--Sobic008G187001 Sobic004G228900 Sobic004G228900 Sobic002G278500--Sobic004G228900 Sobic001G441100 Sobic001G441100 Sobic002G278500--Sobic001G441100 Sobic002G278500--Sobic001G338600 Sobic002G278500--Sobic005G122500 Sobic009G217600 Sobic009G217600 Sobic002G278500--Sobic009G217600 Sobic002G294700 Sobic002G294700 Sobic002G278500--Sobic002G294700 Sobic002G278500--Sobic002G282300 Sobic001G341600 Sobic001G341600 Sobic002G278500--Sobic001G341600 Sobic002G278500--Sobic008G177800 Sobic005G122500--Sobic004G228900 Sobic004G249900 Sobic004G249900 Sobic005G122500--Sobic004G249900 Sobic005G122500--Sobic002G278500 Sobic005G122500--Sobic001G338600 Sobic001G426000 Sobic001G426000 Sobic005G122500--Sobic001G426000 Sobic003G350700 Sobic003G350700 Sobic005G122500--Sobic003G350700 Sobic010G234700 Sobic010G234700 Sobic005G122500--Sobic010G234700 Sobic009G231400 Sobic009G231400 Sobic005G122500--Sobic009G231400 Sobic001G424200 Sobic001G424200 Sobic005G122500--Sobic001G424200 Sobic006G179500 Sobic006G179500 Sobic002G140300--Sobic006G179500 Sobic001G040200 Sobic001G040200 Sobic002G140300--Sobic001G040200 Sobic002G140300--Sobic006G165100 Sobic004G222500 Sobic004G222500 Sobic002G140300--Sobic004G222500 Sobic001G538866 Sobic001G538866 Sobic002G140300--Sobic001G538866 Sobic009G036100 Sobic009G036100 Sobic002G140300--Sobic009G036100 Sobic006G183400 Sobic006G183400 Sobic002G140300--Sobic006G183400 Sobic003G324400 Sobic003G324400 Sobic002G140300--Sobic003G324400 Sobic009G247900 Sobic009G247900 Sobic002G140300--Sobic009G247900 Sobic010G196600 Sobic010G196600 Sobic001G440200--Sobic010G196600 Sobic004G283500 Sobic004G283500 Sobic001G440200--Sobic004G283500 Sobic009G194400 Sobic009G194400 Sobic001G440200--Sobic009G194400 Sobic001G035100 Sobic001G035100 Sobic001G440200--Sobic001G035100 Sobic001G279701 Sobic001G279701 Sobic001G440200--Sobic001G279701 Sobic003G370600 Sobic003G370600 Sobic001G440200--Sobic003G370600 Sobic006G170000 Sobic006G170000 Sobic001G440200--Sobic006G170000 Sobic004G097100 Sobic004G097100 Sobic001G440200--Sobic004G097100 Sobic001G440200--Sobic008G187001
Octagon: transcription factors


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