Gene annotation
Transcriptome id Sobic.001G080100.1
Synonym Sb01g007220
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt C5X038
Pfam -
Panther DB PTHR33181 PTHR33181:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G43150 : -
RAP-DB (Rice) LOC_Os07g02460.1 : expressed protein
MaizeGDB (Corn) Zm00025a008265 , Zm00025a016742
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G158600 short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
2 Sobic.008G136400 expressed protein -
3 Sobic.002G423300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
4 Sobic.002G140400 plastocyanin-like domain containing protein, putative, expressed -
5 Sobic.002G333400 KI domain interacting kinase 1, putative, expressed -
6 Sobic.006G230500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
7 Sobic.001G387900 Chaperone - similar to Cluster: DnaJ domain containing protein(PubMedID : 24655390)@ Oryza sativa(PubMedID : 27586543)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 24655390)@chaperone protein dnaJ, putative, expressed -
8 Sobic.001G108200 expressed protein -
9 Sobic.001G038900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF567 domain containing protein, putative, expressed -
10 Sobic.003G369100 AP2 domain containing protein, expressed -
11 Sobic.003G286600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
12 Sobic.003G334600 NAC domain transcription factor, putative, expressed -
13 Sobic.009G234100 WRKY49, expressed -
14 Sobic.001G320900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
15 Sobic.006G275200 CHCH domain containing protein, expressed -
16 Sobic.006G056400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc-finger protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
17 Sobic.004G141200 cytochrome P450, putative, expressed K00487: trans-cinnamate 4-monooxygenase
18 Sobic.010G176600 - -
19 Sobic.007G155000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
20 Sobic.004G208700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CHIT1 - Chitinase family protein precursor, expressed K01183: chitinase


Gene co-expression network
sample Sobic001G080100 Sobic001G080100 Sobic006G158600 Sobic006G158600 Sobic001G080100--Sobic006G158600 Sobic008G136400 Sobic008G136400 Sobic001G080100--Sobic008G136400 Sobic002G423300 Sobic002G423300 Sobic001G080100--Sobic002G423300 Sobic002G140400 Sobic002G140400 Sobic001G080100--Sobic002G140400 Sobic002G333400 Sobic002G333400 Sobic001G080100--Sobic002G333400 Sobic006G230500 Sobic006G230500 Sobic001G080100--Sobic006G230500 Sobic001G387900 Sobic001G387900 Sobic001G080100--Sobic001G387900 Sobic001G108200 Sobic001G108200 Sobic001G080100--Sobic001G108200 Sobic001G038900 Sobic001G038900 Sobic001G080100--Sobic001G038900 Sobic006G158600--Sobic008G136400 Sobic002G192000 Sobic002G192000 Sobic006G158600--Sobic002G192000 Sobic006G158600--Sobic002G140400 Sobic006G158600--Sobic002G333400 Sobic006G056400 Sobic006G056400 Sobic006G158600--Sobic006G056400 Sobic006G158600--Sobic001G038900 Sobic001G423800 Sobic001G423800 Sobic006G158600--Sobic001G423800 Sobic002G336600 Sobic002G336600 Sobic006G158600--Sobic002G336600 Sobic004G243100 Sobic004G243100 Sobic006G158600--Sobic004G243100 Sobic008G136400--Sobic001G038900 Sobic008G050600 Sobic008G050600 Sobic008G136400--Sobic008G050600 Sobic008G136400--Sobic002G140400 Sobic006G275200 Sobic006G275200 Sobic008G136400--Sobic006G275200 Sobic001G140900 Sobic001G140900 Sobic008G136400--Sobic001G140900 Sobic008G136400--Sobic006G158600 Sobic004G189400 Sobic004G189400 Sobic008G136400--Sobic004G189400 Sobic008G136400--Sobic001G423800 Sobic009G008900 Sobic009G008900 Sobic008G136400--Sobic009G008900 Sobic003G334600 Sobic003G334600 Sobic002G423300--Sobic003G334600 Sobic003G369100 Sobic003G369100 Sobic002G423300--Sobic003G369100 Sobic002G423300--Sobic008G136400 Sobic002G055600 Sobic002G055600 Sobic002G423300--Sobic002G055600 Sobic009G234100 Sobic009G234100 Sobic002G423300--Sobic009G234100 Sobic002G423300--Sobic002G333400 Sobic004G208700 Sobic004G208700 Sobic002G423300--Sobic004G208700 Sobic004G237800 Sobic004G237800 Sobic002G423300--Sobic004G237800 Sobic003G345100 Sobic003G345100 Sobic002G423300--Sobic003G345100 Sobic002G140400--Sobic001G038900 Sobic002G263400 Sobic002G263400 Sobic002G140400--Sobic002G263400 Sobic002G140400--Sobic004G189400 Sobic002G140400--Sobic001G423800 Sobic002G140400--Sobic008G136400 Sobic007G074000 Sobic007G074000 Sobic002G140400--Sobic007G074000 Sobic002G140400--Sobic004G237800 Sobic002G140400--Sobic008G050600 Sobic003G286600 Sobic003G286600 Sobic002G140400--Sobic003G286600 Sobic001G407800 Sobic001G407800 Sobic002G333400--Sobic001G407800 Sobic002G333400--Sobic006G158600 Sobic002G333400--Sobic006G056400 Sobic002G333400--Sobic008G136400 Sobic005G186100 Sobic005G186100 Sobic002G333400--Sobic005G186100 Sobic002G333400--Sobic003G369100 Sobic009G151600 Sobic009G151600 Sobic002G333400--Sobic009G151600 Sobic002G333400--Sobic002G140400 Sobic002G333400--Sobic007G074000 Sobic010G086200 Sobic010G086200 Sobic006G230500--Sobic010G086200 Sobic009G200700 Sobic009G200700 Sobic006G230500--Sobic009G200700 Sobic003G382800 Sobic003G382800 Sobic006G230500--Sobic003G382800 Sobic006G230500--Sobic001G387900 Sobic004G177700 Sobic004G177700 Sobic006G230500--Sobic004G177700 Sobic001G320900 Sobic001G320900 Sobic006G230500--Sobic001G320900 Sobic003G148600 Sobic003G148600 Sobic006G230500--Sobic003G148600 Sobic006G230500--Sobic002G423300 Sobic010G217800 Sobic010G217800 Sobic006G230500--Sobic010G217800 Sobic001G387900--Sobic001G108200 Sobic001G308300 Sobic001G308300 Sobic001G387900--Sobic001G308300 Sobic004G141200 Sobic004G141200 Sobic001G387900--Sobic004G141200 Sobic001G387900--Sobic003G382800 Sobic003G086600 Sobic003G086600 Sobic001G387900--Sobic003G086600 Sobic001G387900--Sobic006G158600 Sobic003G078100 Sobic003G078100 Sobic001G387900--Sobic003G078100 Sobic001G387900--Sobic003G369100 Sobic004G304625 Sobic004G304625 Sobic001G387900--Sobic004G304625 Sobic001G108200--Sobic004G141200 Sobic003G393900 Sobic003G393900 Sobic001G108200--Sobic003G393900 Sobic004G100700 Sobic004G100700 Sobic001G108200--Sobic004G100700 Sobic001G108200--Sobic003G369100 Sobic001G108200--Sobic003G086600 Sobic003G355100 Sobic003G355100 Sobic001G108200--Sobic003G355100 Sobic007G214600 Sobic007G214600 Sobic001G108200--Sobic007G214600 Sobic001G108200--Sobic003G382800 Sobic005G099000 Sobic005G099000 Sobic001G108200--Sobic005G099000 Sobic001G038900--Sobic002G140400 Sobic001G038900--Sobic001G140900 Sobic001G038900--Sobic008G136400 Sobic001G038900--Sobic008G050600 Sobic001G038900--Sobic001G423800 Sobic009G159400 Sobic009G159400 Sobic001G038900--Sobic009G159400 Sobic001G038900--Sobic003G345100 Sobic001G367600 Sobic001G367600 Sobic001G038900--Sobic001G367600 Sobic001G038900--Sobic004G189400
Octagon: transcription factors


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