Gene annotation
Transcriptome id Sobic.004G233500.10,Sobic.004G233500.1,Sobic.004G233500.5,Sobic.004G233500.9,Sobic.004G233500.3,Sobic.004G233500.2,Sobic.004G233500.7,Sobic.004G233500.4,Sobic.004G233500.6,Sobic.004G233500.8,Sobic.004G233500.11,Sobic.004G233500.12
Synonym Sb04g027670
Functional annotation trpH, putative, expressed
UniProt A0A1Z5RPE0 , A0A1Z5RPN7 , C5XYP2 , A0A1Z5RP04 , A0A1Z5RNR8 , A0A1Z5RNT5 , A0A1Z5RPS9 , A0A1Z5RNS4 , A0A1Z5RNR7 , A0A1Z5RP83
Pfam PF02811
Panther DB PTHR30007 PTHR30007:SF24
NCBI CDD -
KEGG Orthology K07053; 3',5'-nucleoside bisphosphate phosphatase
Gene Ontology GO:0003824; catalytic activity


Orthologs (automatic annotation)
TAIR AT2G13840 : Polymerase/histidinol phosphatase-like
RAP-DB (Rice) LOC_Os02g51660.1 : trpH, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK01872 , KQK01871 , KQK01870
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G078850 - K14514: ethylene-insensitive protein 3
2 Sobic.004G107400 expressed protein -
3 Sobic.010G152700 helix-loop-helix DNA-binding domain containing protein, expressed -
4 Sobic.001G179680 - -
5 Sobic.003G191800 helix-loop-helix DNA-binding domain containing protein, expressed -
6 Sobic.006G171000 Highest expression level in primordial inflorescence(PubMedID : 27501690)@OsSPL7 - SBP-box gene family member, expressed -
7 Sobic.001G137200 homeobox domain containing protein, expressed -
8 Sobic.003G104900 methyltransferase, putative, expressed K08241: jasmonate O-methyltransferase
9 Sobic.009G028600 expressed protein -
10 Sobic.007G183000 helix-loop-helix DNA-binding domain containing protein, expressed -
11 Sobic.008G002100 zinc finger, C3HC4 type domain containing protein -
12 Sobic.008G023000 expressed protein -
13 Sobic.004G226300 expressed protein -
14 Sobic.005G102200 1-aminocyclopropane-1-carboxylate oxidase homolog 1, putative, expressed -
15 Sobic.005G209800 nodulin, putative, expressed -
16 Sobic.001G527400 - -
17 Sobic.009G187500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MONOCULM 1, putative, expressed -
18 Sobic.002G285525 - -
19 Sobic.002G048250 - -
20 Sobic.005G231800 tropinone reductase, putative, expressed K08081: tropinone reductase I


Gene co-expression network
sample Sobic004G233500 Sobic004G233500 Sobic002G078850 Sobic002G078850 Sobic004G233500--Sobic002G078850 Sobic004G107400 Sobic004G107400 Sobic004G233500--Sobic004G107400 Sobic010G152700 Sobic010G152700 Sobic004G233500--Sobic010G152700 Sobic001G179680 Sobic001G179680 Sobic004G233500--Sobic001G179680 Sobic003G191800 Sobic003G191800 Sobic004G233500--Sobic003G191800 Sobic006G171000 Sobic006G171000 Sobic004G233500--Sobic006G171000 Sobic001G137200 Sobic001G137200 Sobic004G233500--Sobic001G137200 Sobic003G104900 Sobic003G104900 Sobic004G233500--Sobic003G104900 Sobic009G028600 Sobic009G028600 Sobic004G233500--Sobic009G028600 Sobic002G078850--Sobic001G179680 Sobic002G078850--Sobic004G107400 Sobic002G078850--Sobic006G171000 Sobic002G048250 Sobic002G048250 Sobic002G078850--Sobic002G048250 Sobic007G183000 Sobic007G183000 Sobic002G078850--Sobic007G183000 Sobic001G527400 Sobic001G527400 Sobic002G078850--Sobic001G527400 Sobic008G023000 Sobic008G023000 Sobic002G078850--Sobic008G023000 Sobic004G226300 Sobic004G226300 Sobic002G078850--Sobic004G226300 Sobic008G002100 Sobic008G002100 Sobic002G078850--Sobic008G002100 Sobic004G107400--Sobic006G171000 Sobic010G014900 Sobic010G014900 Sobic004G107400--Sobic010G014900 Sobic004G107400--Sobic001G137200 Sobic003G390300 Sobic003G390300 Sobic004G107400--Sobic003G390300 Sobic005G209800 Sobic005G209800 Sobic004G107400--Sobic005G209800 Sobic004G107400--Sobic002G078850 Sobic004G107400--Sobic003G104900 Sobic005G231800 Sobic005G231800 Sobic004G107400--Sobic005G231800 Sobic004G107400--Sobic008G002100 Sobic010G152700--Sobic001G137200 Sobic010G152700--Sobic006G171000 Sobic010G152700--Sobic008G002100 Sobic010G152700--Sobic001G527400 Sobic010G152700--Sobic005G209800 Sobic010G152700--Sobic007G183000 Sobic010G152700--Sobic008G023000 Sobic010G152700--Sobic004G226300 Sobic002G285525 Sobic002G285525 Sobic010G152700--Sobic002G285525 Sobic001G179680--Sobic002G078850 Sobic001G179680--Sobic002G048250 Sobic004G224300 Sobic004G224300 Sobic001G179680--Sobic004G224300 Sobic004G347866 Sobic004G347866 Sobic001G179680--Sobic004G347866 Sobic007G157550 Sobic007G157550 Sobic001G179680--Sobic007G157550 Sobic001G179680--Sobic007G183000 Sobic009G223700 Sobic009G223700 Sobic001G179680--Sobic009G223700 Sobic001G457100 Sobic001G457100 Sobic001G179680--Sobic001G457100 Sobic001G179680--Sobic004G226300 Sobic005G102200 Sobic005G102200 Sobic003G191800--Sobic005G102200 Sobic003G191800--Sobic010G152700 Sobic003G191800--Sobic001G137200 Sobic007G139000 Sobic007G139000 Sobic003G191800--Sobic007G139000 Sobic001G483700 Sobic001G483700 Sobic003G191800--Sobic001G483700 Sobic003G191800--Sobic005G209800 Sobic007G072400 Sobic007G072400 Sobic003G191800--Sobic007G072400 Sobic003G191800--Sobic006G171000 Sobic003G191800--Sobic008G002100 Sobic006G171000--Sobic008G023000 Sobic006G171000--Sobic004G226300 Sobic006G171000--Sobic008G002100 Sobic006G171000--Sobic007G183000 Sobic006G171000--Sobic001G527400 Sobic006G171000--Sobic005G209800 Sobic006G171000--Sobic005G231800 Sobic003G173032 Sobic003G173032 Sobic006G171000--Sobic003G173032 Sobic006G171000--Sobic002G048250 Sobic001G137200--Sobic002G285525 Sobic001G137200--Sobic010G152700 Sobic001G137200--Sobic006G171000 Sobic001G137200--Sobic005G209800 Sobic001G137200--Sobic004G226300 Sobic001G137200--Sobic008G002100 Sobic001G137200--Sobic007G183000 Sobic001G137200--Sobic001G483700 Sobic001G137200--Sobic001G527400 Sobic003G104900--Sobic005G209800 Sobic003G104900--Sobic001G483700 Sobic003G104900--Sobic008G002100 Sobic003G104900--Sobic008G023000 Sobic003G104900--Sobic001G527400 Sobic003G104900--Sobic007G183000 Sobic003G104900--Sobic005G231800 Sobic003G104900--Sobic004G226300 Sobic003G104900--Sobic006G171000 Sobic009G028600--Sobic006G171000 Sobic009G028600--Sobic004G226300 Sobic009G028600--Sobic007G183000 Sobic009G028600--Sobic002G285525 Sobic009G028600--Sobic001G527400 Sobic009G028600--Sobic005G231800 Sobic009G028600--Sobic001G137200 Sobic009G028600--Sobic008G023000 Sobic009G028600--Sobic002G048250
Octagon: transcription factors


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