Gene annotation
Transcriptome id Sobic.002G098701.1,Sobic.002G098701.2
Synonym -
Functional annotation -
UniProt A0A1W0W352 , A0A1W0W377
Pfam PF08268 PF08268 PF00646
Panther DB PTHR31790 PTHR31790:SF20
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G17500 : F-box family protein
RAP-DB (Rice) LOC_Os07g13890.1 : OsFBX230 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G285800 expressed protein -
2 Sobic.001G152100 SWI1, putative, expressed -
3 Sobic.004G153200 ZOS2-07 - C2H2 zinc finger protein, expressed -
4 Sobic.006G122900 expressed protein K15360: STRA13, CENPX, centromere protein X
5 Sobic.009G184700 zinc finger C3HC4 type family protein, putative, expressed K10695: E3 ubiquitin-protein ligase RNF1/2
6 Sobic.004G131100 expressed protein -
7 Sobic.001G117300 expressed protein -
8 Sobic.001G375300 ulp1 protease family protein, putative, expressed K08592: sentrin-specific protease 1
9 Sobic.006G073001 - -
10 Sobic.001G536400 THO complex subunit 1, putative, expressed K12878: THO complex subunit 1
11 Sobic.010G254900 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed K14321: NUPL2, NUP42, nucleoporin-like protein 2
12 Sobic.005G143400 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
13 Sobic.008G075900 seven in absentia protein family domain containing protein, expressed K04506: E3 ubiquitin-protein ligase SIAH1
14 Sobic.008G123500 auxilin, putative, expressed -
15 Sobic.010G061100 DUF292 domain containing protein, expressed -
16 Sobic.002G067100 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
17 Sobic.002G262700 RNA recognition motif containing protein, putative, expressed K13155: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
18 Sobic.005G164500 expressed protein -
19 Sobic.007G046200 ELF7, putative, expressed K15174: RNA polymerase II-associated factor 1
20 Sobic.001G022100 expressed protein -


Gene co-expression network
sample Sobic002G098701 Sobic002G098701 Sobic001G285800 Sobic001G285800 Sobic002G098701--Sobic001G285800 Sobic001G152100 Sobic001G152100 Sobic002G098701--Sobic001G152100 Sobic004G153200 Sobic004G153200 Sobic002G098701--Sobic004G153200 Sobic006G122900 Sobic006G122900 Sobic002G098701--Sobic006G122900 Sobic009G184700 Sobic009G184700 Sobic002G098701--Sobic009G184700 Sobic004G131100 Sobic004G131100 Sobic002G098701--Sobic004G131100 Sobic001G117300 Sobic001G117300 Sobic002G098701--Sobic001G117300 Sobic001G375300 Sobic001G375300 Sobic002G098701--Sobic001G375300 Sobic006G073001 Sobic006G073001 Sobic002G098701--Sobic006G073001 Sobic001G285800--Sobic004G131100 Sobic001G285800--Sobic002G098701 Sobic002G067100 Sobic002G067100 Sobic001G285800--Sobic002G067100 Sobic001G285800--Sobic006G073001 Sobic007G090448 Sobic007G090448 Sobic001G285800--Sobic007G090448 Sobic010G267650 Sobic010G267650 Sobic001G285800--Sobic010G267650 Sobic002G219800 Sobic002G219800 Sobic001G285800--Sobic002G219800 Sobic001G262500 Sobic001G262500 Sobic001G285800--Sobic001G262500 Sobic001G316200 Sobic001G316200 Sobic001G285800--Sobic001G316200 Sobic001G152100--Sobic001G375300 Sobic001G214800 Sobic001G214800 Sobic001G152100--Sobic001G214800 Sobic001G500300 Sobic001G500300 Sobic001G152100--Sobic001G500300 Sobic001G222250 Sobic001G222250 Sobic001G152100--Sobic001G222250 Sobic007G159900 Sobic007G159900 Sobic001G152100--Sobic007G159900 Sobic005G220000 Sobic005G220000 Sobic001G152100--Sobic005G220000 Sobic001G536400 Sobic001G536400 Sobic001G152100--Sobic001G536400 Sobic002G068100 Sobic002G068100 Sobic001G152100--Sobic002G068100 Sobic001G362200 Sobic001G362200 Sobic001G152100--Sobic001G362200 Sobic005G143400 Sobic005G143400 Sobic004G153200--Sobic005G143400 Sobic009G162200 Sobic009G162200 Sobic004G153200--Sobic009G162200 Sobic004G283000 Sobic004G283000 Sobic004G153200--Sobic004G283000 Sobic004G027100 Sobic004G027100 Sobic004G153200--Sobic004G027100 Sobic010G040800 Sobic010G040800 Sobic004G153200--Sobic010G040800 Sobic001G371000 Sobic001G371000 Sobic004G153200--Sobic001G371000 Sobic001G053800 Sobic001G053800 Sobic004G153200--Sobic001G053800 Sobic010G260500 Sobic010G260500 Sobic004G153200--Sobic010G260500 Sobic004G350100 Sobic004G350100 Sobic004G153200--Sobic004G350100 Sobic003G396300 Sobic003G396300 Sobic006G122900--Sobic003G396300 Sobic006G122900--Sobic006G073001 Sobic008G081150 Sobic008G081150 Sobic006G122900--Sobic008G081150 Sobic003G037900 Sobic003G037900 Sobic006G122900--Sobic003G037900 Sobic004G123600 Sobic004G123600 Sobic006G122900--Sobic004G123600 Sobic004G307700 Sobic004G307700 Sobic006G122900--Sobic004G307700 Sobic006G266600 Sobic006G266600 Sobic006G122900--Sobic006G266600 Sobic003G284500 Sobic003G284500 Sobic006G122900--Sobic003G284500 Sobic002G166500 Sobic002G166500 Sobic006G122900--Sobic002G166500 Sobic007G047700 Sobic007G047700 Sobic009G184700--Sobic007G047700 Sobic005G019200 Sobic005G019200 Sobic009G184700--Sobic005G019200 Sobic008G123500 Sobic008G123500 Sobic009G184700--Sobic008G123500 Sobic002G400900 Sobic002G400900 Sobic009G184700--Sobic002G400900 Sobic009G184700--Sobic005G143400 Sobic009G121100 Sobic009G121100 Sobic009G184700--Sobic009G121100 Sobic001G035500 Sobic001G035500 Sobic009G184700--Sobic001G035500 Sobic004G048000 Sobic004G048000 Sobic009G184700--Sobic004G048000 Sobic009G184700--Sobic004G027100 Sobic004G131100--Sobic001G285800 Sobic004G131100--Sobic002G219800 Sobic004G270200 Sobic004G270200 Sobic004G131100--Sobic004G270200 Sobic010G254900 Sobic010G254900 Sobic004G131100--Sobic010G254900 Sobic005G154700 Sobic005G154700 Sobic004G131100--Sobic005G154700 Sobic004G131100--Sobic002G098701 Sobic004G076850 Sobic004G076850 Sobic004G131100--Sobic004G076850 Sobic004G131100--Sobic003G037900 Sobic004G026100 Sobic004G026100 Sobic004G131100--Sobic004G026100 Sobic002G418700 Sobic002G418700 Sobic001G117300--Sobic002G418700 Sobic001G323000 Sobic001G323000 Sobic001G117300--Sobic001G323000 Sobic006G194500 Sobic006G194500 Sobic001G117300--Sobic006G194500 Sobic006G249700 Sobic006G249700 Sobic001G117300--Sobic006G249700 Sobic001G466700 Sobic001G466700 Sobic001G117300--Sobic001G466700 Sobic001G143500 Sobic001G143500 Sobic001G117300--Sobic001G143500 Sobic009G138100 Sobic009G138100 Sobic001G117300--Sobic009G138100 Sobic006G217700 Sobic006G217700 Sobic001G117300--Sobic006G217700 Sobic007G162800 Sobic007G162800 Sobic001G117300--Sobic007G162800 Sobic001G360900 Sobic001G360900 Sobic001G375300--Sobic001G360900 Sobic001G124000 Sobic001G124000 Sobic001G375300--Sobic001G124000 Sobic004G237100 Sobic004G237100 Sobic001G375300--Sobic004G237100 Sobic002G277600 Sobic002G277600 Sobic001G375300--Sobic002G277600 Sobic008G103200 Sobic008G103200 Sobic001G375300--Sobic008G103200 Sobic003G241800 Sobic003G241800 Sobic001G375300--Sobic003G241800 Sobic009G247400 Sobic009G247400 Sobic001G375300--Sobic009G247400 Sobic007G000100 Sobic007G000100 Sobic001G375300--Sobic007G000100 Sobic008G011100 Sobic008G011100 Sobic001G375300--Sobic008G011100 Sobic006G073001--Sobic007G090448 Sobic005G003900 Sobic005G003900 Sobic006G073001--Sobic005G003900 Sobic006G073001--Sobic006G122900 Sobic006G073001--Sobic002G166500 Sobic002G106100 Sobic002G106100 Sobic006G073001--Sobic002G106100 Sobic006G210100 Sobic006G210100 Sobic006G073001--Sobic006G210100 Sobic006G073001--Sobic010G267650 Sobic009G251300 Sobic009G251300 Sobic006G073001--Sobic009G251300 Sobic006G073001--Sobic004G123600
Octagon: transcription factors


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