Gene annotation
Transcriptome id Sobic.005G196950.2,Sobic.005G196950.1,Sobic.005G196950.3
Synonym -
Functional annotation -
UniProt A0A1Z5RJH7
Pfam PF07647
Panther DB PTHR24176
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G07760 : Sterile alpha motif (SAM) domain-containing protein
RAP-DB (Rice) LOC_Os12g32992.1 : expressed protein
MaizeGDB (Corn) Zm00025a029254
Brachypodium KQJ86563 , KQJ87605
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G218300 Zinc finger, ZZ type domain containing protein, expressed -
2 Sobic.010G209700 expressed protein -
3 Sobic.006G202200 ENTH domain containing protein, expressed K12471: epsin
4 Sobic.007G156200 glycoprotein 3-alpha-L-fucosyltransferase A, putative, expressed K00753: glycoprotein 3-alpha-L-fucosyltransferase
5 Sobic.004G042900 VIL2 protein, putative, expressed -
6 Sobic.006G128800 expressed protein -
7 Sobic.003G248500 WD domain, G-beta repeat domain containing protein, expressed -
8 Sobic.010G005700 expressed protein -
9 Sobic.006G130200 expressed protein -
10 Sobic.006G082900 expressed protein -
11 Sobic.001G176200 FHA domain containing protein, putative, expressed K13216: PPP1R8, nuclear inhibitor of protein phosphatase 1
12 Sobic.002G365100 RNA recognition motif containing protein, putative, expressed -
13 Sobic.001G425000 Ser/Thr protein phosphatase family protein, putative, expressed K06269: serine/threonine-protein phosphatase PP1 catalytic subunit
14 Sobic.003G008500 VHS and GAT domain containing protein, expressed -
15 Sobic.004G026100 tRNA methyltransferase, putative, expressed K03439: trmB, METTL1, tRNA (guanine-N7-)-methyltransferase
16 Sobic.007G088900 expressed protein -
17 Sobic.003G407100 CBS domain-containing protein, putative, expressed -
18 Sobic.009G040800 helicase, putative, expressed K10844: ERCC2, DNA excision repair protein ERCC-2
19 Sobic.001G136600 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
20 Sobic.003G261300 arginine/serine-rich coiled-coil protein 1, putative, expressed -


Gene co-expression network
sample Sobic005G196950 Sobic005G196950 Sobic004G218300 Sobic004G218300 Sobic005G196950--Sobic004G218300 Sobic010G209700 Sobic010G209700 Sobic005G196950--Sobic010G209700 Sobic006G202200 Sobic006G202200 Sobic005G196950--Sobic006G202200 Sobic007G156200 Sobic007G156200 Sobic005G196950--Sobic007G156200 Sobic004G042900 Sobic004G042900 Sobic005G196950--Sobic004G042900 Sobic006G128800 Sobic006G128800 Sobic005G196950--Sobic006G128800 Sobic003G248500 Sobic003G248500 Sobic005G196950--Sobic003G248500 Sobic010G005700 Sobic010G005700 Sobic005G196950--Sobic010G005700 Sobic006G130200 Sobic006G130200 Sobic005G196950--Sobic006G130200 Sobic003G398400 Sobic003G398400 Sobic004G218300--Sobic003G398400 Sobic004G218300--Sobic006G130200 Sobic004G259300 Sobic004G259300 Sobic004G218300--Sobic004G259300 Sobic009G228400 Sobic009G228400 Sobic004G218300--Sobic009G228400 Sobic006G215100 Sobic006G215100 Sobic004G218300--Sobic006G215100 Sobic003G407100 Sobic003G407100 Sobic004G218300--Sobic003G407100 Sobic007G192400 Sobic007G192400 Sobic004G218300--Sobic007G192400 Sobic002G147100 Sobic002G147100 Sobic004G218300--Sobic002G147100 Sobic002G317400 Sobic002G317400 Sobic004G218300--Sobic002G317400 Sobic010G035801 Sobic010G035801 Sobic010G209700--Sobic010G035801 Sobic006G100000 Sobic006G100000 Sobic010G209700--Sobic006G100000 Sobic006G144000 Sobic006G144000 Sobic010G209700--Sobic006G144000 Sobic007G158900 Sobic007G158900 Sobic010G209700--Sobic007G158900 Sobic003G229400 Sobic003G229400 Sobic010G209700--Sobic003G229400 Sobic004G353400 Sobic004G353400 Sobic010G209700--Sobic004G353400 Sobic009G227100 Sobic009G227100 Sobic010G209700--Sobic009G227100 Sobic004G026100 Sobic004G026100 Sobic010G209700--Sobic004G026100 Sobic003G079750 Sobic003G079750 Sobic010G209700--Sobic003G079750 Sobic003G008500 Sobic003G008500 Sobic006G202200--Sobic003G008500 Sobic004G345700 Sobic004G345700 Sobic006G202200--Sobic004G345700 Sobic006G082900 Sobic006G082900 Sobic006G202200--Sobic006G082900 Sobic009G229600 Sobic009G229600 Sobic006G202200--Sobic009G229600 Sobic001G518400 Sobic001G518400 Sobic006G202200--Sobic001G518400 Sobic009G126600 Sobic009G126600 Sobic006G202200--Sobic009G126600 Sobic003G401000 Sobic003G401000 Sobic006G202200--Sobic003G401000 Sobic009G214900 Sobic009G214900 Sobic006G202200--Sobic009G214900 Sobic008G149800 Sobic008G149800 Sobic006G202200--Sobic008G149800 Sobic009G162100 Sobic009G162100 Sobic007G156200--Sobic009G162100 Sobic010G243400 Sobic010G243400 Sobic007G156200--Sobic010G243400 Sobic009G257200 Sobic009G257200 Sobic007G156200--Sobic009G257200 Sobic003G243700 Sobic003G243700 Sobic007G156200--Sobic003G243700 Sobic004G130400 Sobic004G130400 Sobic007G156200--Sobic004G130400 Sobic005G177700 Sobic005G177700 Sobic007G156200--Sobic005G177700 Sobic003G270600 Sobic003G270600 Sobic007G156200--Sobic003G270600 Sobic001G127000 Sobic001G127000 Sobic007G156200--Sobic001G127000 Sobic007G156200--Sobic003G407100 Sobic004G042900--Sobic002G147100 Sobic001G017200 Sobic001G017200 Sobic004G042900--Sobic001G017200 Sobic005G009100 Sobic005G009100 Sobic004G042900--Sobic005G009100 Sobic004G042900--Sobic004G353400 Sobic007G030100 Sobic007G030100 Sobic004G042900--Sobic007G030100 Sobic003G190200 Sobic003G190200 Sobic004G042900--Sobic003G190200 Sobic004G042900--Sobic006G144000 Sobic002G147200 Sobic002G147200 Sobic004G042900--Sobic002G147200 Sobic004G042900--Sobic004G218300 Sobic003G205501 Sobic003G205501 Sobic006G128800--Sobic003G205501 Sobic010G174800 Sobic010G174800 Sobic006G128800--Sobic010G174800 Sobic004G349900 Sobic004G349900 Sobic006G128800--Sobic004G349900 Sobic002G157300 Sobic002G157300 Sobic006G128800--Sobic002G157300 Sobic003G261300 Sobic003G261300 Sobic006G128800--Sobic003G261300 Sobic006G128800--Sobic003G248500 Sobic006G128800--Sobic006G130200 Sobic001G514000 Sobic001G514000 Sobic006G128800--Sobic001G514000 Sobic006G128800--Sobic003G008500 Sobic003G359300 Sobic003G359300 Sobic003G248500--Sobic003G359300 Sobic004G283000 Sobic004G283000 Sobic003G248500--Sobic004G283000 Sobic003G248500--Sobic010G174800 Sobic001G390500 Sobic001G390500 Sobic003G248500--Sobic001G390500 Sobic002G197100 Sobic002G197100 Sobic003G248500--Sobic002G197100 Sobic003G185200 Sobic003G185200 Sobic003G248500--Sobic003G185200 Sobic002G365100 Sobic002G365100 Sobic003G248500--Sobic002G365100 Sobic003G051200 Sobic003G051200 Sobic003G248500--Sobic003G051200 Sobic003G248500--Sobic006G128800 Sobic004G067700 Sobic004G067700 Sobic010G005700--Sobic004G067700 Sobic010G005700--Sobic003G407100 Sobic009G205200 Sobic009G205200 Sobic010G005700--Sobic009G205200 Sobic001G287800 Sobic001G287800 Sobic010G005700--Sobic001G287800 Sobic004G003401 Sobic004G003401 Sobic010G005700--Sobic004G003401 Sobic010G005700--Sobic004G345700 Sobic004G003501 Sobic004G003501 Sobic010G005700--Sobic004G003501 Sobic010G005700--Sobic002G365100 Sobic010G005700--Sobic006G128800 Sobic006G130200--Sobic006G128800 Sobic006G130200--Sobic004G218300 Sobic006G130200--Sobic010G174800 Sobic009G032300 Sobic009G032300 Sobic006G130200--Sobic009G032300 Sobic006G130200--Sobic003G398400 Sobic001G425000 Sobic001G425000 Sobic006G130200--Sobic001G425000 Sobic006G092800 Sobic006G092800 Sobic006G130200--Sobic006G092800 Sobic003G336800 Sobic003G336800 Sobic006G130200--Sobic003G336800 Sobic001G235000 Sobic001G235000 Sobic006G130200--Sobic001G235000
Octagon: transcription factors


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