Gene annotation
Transcriptome id Sobic.003G407100.1
Synonym Sb03g044210
Functional annotation CBS domain-containing protein, putative, expressed
UniProt C5XGC5
Pfam PF00564 PF00571
Panther DB PTHR13780 PTHR13780:SF45
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G50640 : CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein
RAP-DB (Rice) LOC_Os01g69900.1 : CBS domain-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a011306 , Zm00025a039279 , Zm00025a026240
Brachypodium KQJ92069 , KQJ92068 , KQK11277
Barley HORVU3Hr1G094890.7 , HORVU3Hr1G094890.6 , HORVU3Hr1G094890.5 , HORVU3Hr1G094890.4 , HORVU3Hr1G094890.3 , HORVU3Hr1G094890.2 , HORVU3Hr1G094890.1 , HORVU3Hr1G094890.9 , HORVU3Hr1G094890.8 , HORVU3Hr1G094890.11 , HORVU3Hr1G094890.10
Wheat TraesCS3A02G433400 , TraesCS3A02G433400 , TraesCS3B02G469200 , TraesCS3B02G469200 , TraesCS3D02G426800
Populus -


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cDNA sequences
Sobic.003G407100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G067700 BRCA1-associated protein, putative, expressed K10632: BRCA1-associated protein
2 Sobic.008G042600 N-acetylglucosaminyltransferase I, putative, expressed K00726: alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
3 Sobic.004G218300 Zinc finger, ZZ type domain containing protein, expressed -
4 Sobic.003G398400 expressed protein -
5 Sobic.002G370900 OsPOP16 - Putative Prolyl Oligopeptidase homologue, expressed K06889: uncharacterized protein
6 Sobic.003G008500 VHS and GAT domain containing protein, expressed -
7 Sobic.010G041400 6-phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
8 Sobic.005G045300 PX domain containing protein, putative, expressed K17925: sorting nexin-13
9 Sobic.010G005700 expressed protein -
10 Sobic.001G114000 expressed protein -
11 Sobic.006G082900 expressed protein -
12 Sobic.001G251700 OsPP2Ac-4 - Phosphatase 2A isoform 4 belonging to family 2, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
13 Sobic.007G008900 SAC domain containing protein, putative, expressed -
14 Sobic.002G006300 expressed protein -
15 Sobic.009G126400 glycine-rich protein, putative, expressed K14845: RAI1, RAT1-interacting protein
16 Sobic.007G137900 nucleoside-triphosphatase, putative, expressed K01510: ENTPD1_3_8, apyrase
17 Sobic.007G118600 mitochondrial carrier protein, putative, expressed K15119: solute carrier family 25, member 39/40
18 Sobic.003G261300 arginine/serine-rich coiled-coil protein 1, putative, expressed -
19 Sobic.006G202200 ENTH domain containing protein, expressed K12471: epsin
20 Sobic.007G125000 OsAPRL4 adenosine 5\'-phosphosulfate reductase-like OsAPRL4, expressed -


Gene co-expression network
sample Sobic003G407100 Sobic003G407100 Sobic004G067700 Sobic004G067700 Sobic003G407100--Sobic004G067700 Sobic008G042600 Sobic008G042600 Sobic003G407100--Sobic008G042600 Sobic004G218300 Sobic004G218300 Sobic003G407100--Sobic004G218300 Sobic003G398400 Sobic003G398400 Sobic003G407100--Sobic003G398400 Sobic002G370900 Sobic002G370900 Sobic003G407100--Sobic002G370900 Sobic003G008500 Sobic003G008500 Sobic003G407100--Sobic003G008500 Sobic010G041400 Sobic010G041400 Sobic003G407100--Sobic010G041400 Sobic005G045300 Sobic005G045300 Sobic003G407100--Sobic005G045300 Sobic010G005700 Sobic010G005700 Sobic003G407100--Sobic010G005700 Sobic001G114000 Sobic001G114000 Sobic004G067700--Sobic001G114000 Sobic006G173100 Sobic006G173100 Sobic004G067700--Sobic006G173100 Sobic004G067700--Sobic002G370900 Sobic001G512700 Sobic001G512700 Sobic004G067700--Sobic001G512700 Sobic007G217000 Sobic007G217000 Sobic004G067700--Sobic007G217000 Sobic009G126400 Sobic009G126400 Sobic004G067700--Sobic009G126400 Sobic004G067700--Sobic005G045300 Sobic004G067700--Sobic003G008500 Sobic002G310200 Sobic002G310200 Sobic004G067700--Sobic002G310200 Sobic008G042600--Sobic003G008500 Sobic010G276800 Sobic010G276800 Sobic008G042600--Sobic010G276800 Sobic008G042600--Sobic004G067700 Sobic006G046700 Sobic006G046700 Sobic008G042600--Sobic006G046700 Sobic001G251700 Sobic001G251700 Sobic008G042600--Sobic001G251700 Sobic008G042600--Sobic002G370900 Sobic008G042600--Sobic003G407100 Sobic006G028200 Sobic006G028200 Sobic008G042600--Sobic006G028200 Sobic007G061700 Sobic007G061700 Sobic008G042600--Sobic007G061700 Sobic004G218300--Sobic003G398400 Sobic006G130200 Sobic006G130200 Sobic004G218300--Sobic006G130200 Sobic004G259300 Sobic004G259300 Sobic004G218300--Sobic004G259300 Sobic009G228400 Sobic009G228400 Sobic004G218300--Sobic009G228400 Sobic006G215100 Sobic006G215100 Sobic004G218300--Sobic006G215100 Sobic004G218300--Sobic003G407100 Sobic007G192400 Sobic007G192400 Sobic004G218300--Sobic007G192400 Sobic002G147100 Sobic002G147100 Sobic004G218300--Sobic002G147100 Sobic002G317400 Sobic002G317400 Sobic004G218300--Sobic002G317400 Sobic003G398400--Sobic004G218300 Sobic003G398400--Sobic006G130200 Sobic004G084500 Sobic004G084500 Sobic003G398400--Sobic004G084500 Sobic003G394200 Sobic003G394200 Sobic003G398400--Sobic003G394200 Sobic002G164300 Sobic002G164300 Sobic003G398400--Sobic002G164300 Sobic010G213500 Sobic010G213500 Sobic003G398400--Sobic010G213500 Sobic010G074900 Sobic010G074900 Sobic003G398400--Sobic010G074900 Sobic004G122900 Sobic004G122900 Sobic003G398400--Sobic004G122900 Sobic003G398400--Sobic003G407100 Sobic001G176200 Sobic001G176200 Sobic002G370900--Sobic001G176200 Sobic006G082900 Sobic006G082900 Sobic002G370900--Sobic006G082900 Sobic002G370900--Sobic004G067700 Sobic002G370900--Sobic006G173100 Sobic002G370900--Sobic003G008500 Sobic002G260400 Sobic002G260400 Sobic002G370900--Sobic002G260400 Sobic002G370900--Sobic002G310200 Sobic002G197100 Sobic002G197100 Sobic002G370900--Sobic002G197100 Sobic004G345700 Sobic004G345700 Sobic002G370900--Sobic004G345700 Sobic002G157300 Sobic002G157300 Sobic003G008500--Sobic002G157300 Sobic003G008500--Sobic006G082900 Sobic003G008500--Sobic002G370900 Sobic003G008500--Sobic004G067700 Sobic003G401000 Sobic003G401000 Sobic003G008500--Sobic003G401000 Sobic001G514000 Sobic001G514000 Sobic003G008500--Sobic001G514000 Sobic003G008500--Sobic006G173100 Sobic006G202200 Sobic006G202200 Sobic003G008500--Sobic006G202200 Sobic006G128800 Sobic006G128800 Sobic003G008500--Sobic006G128800 Sobic010G041400--Sobic003G407100 Sobic009G126600 Sobic009G126600 Sobic010G041400--Sobic009G126600 Sobic010G154900 Sobic010G154900 Sobic010G041400--Sobic010G154900 Sobic007G125000 Sobic007G125000 Sobic010G041400--Sobic007G125000 Sobic009G192300 Sobic009G192300 Sobic010G041400--Sobic009G192300 Sobic001G532600 Sobic001G532600 Sobic010G041400--Sobic001G532600 Sobic010G041400--Sobic009G126400 Sobic010G140400 Sobic010G140400 Sobic010G041400--Sobic010G140400 Sobic010G098200 Sobic010G098200 Sobic010G041400--Sobic010G098200 Sobic005G045300--Sobic001G512700 Sobic003G408500 Sobic003G408500 Sobic005G045300--Sobic003G408500 Sobic010G129200 Sobic010G129200 Sobic005G045300--Sobic010G129200 Sobic003G445400 Sobic003G445400 Sobic005G045300--Sobic003G445400 Sobic009G166300 Sobic009G166300 Sobic005G045300--Sobic009G166300 Sobic004G031700 Sobic004G031700 Sobic005G045300--Sobic004G031700 Sobic006G128900 Sobic006G128900 Sobic005G045300--Sobic006G128900 Sobic002G006900 Sobic002G006900 Sobic005G045300--Sobic002G006900 Sobic008G024600 Sobic008G024600 Sobic005G045300--Sobic008G024600 Sobic010G005700--Sobic004G067700 Sobic010G005700--Sobic003G407100 Sobic009G205200 Sobic009G205200 Sobic010G005700--Sobic009G205200 Sobic001G287800 Sobic001G287800 Sobic010G005700--Sobic001G287800 Sobic004G003401 Sobic004G003401 Sobic010G005700--Sobic004G003401 Sobic010G005700--Sobic004G345700 Sobic004G003501 Sobic004G003501 Sobic010G005700--Sobic004G003501 Sobic002G365100 Sobic002G365100 Sobic010G005700--Sobic002G365100 Sobic010G005700--Sobic006G128800
Octagon: transcription factors


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