Gene annotation
Transcriptome id Sobic.009G251600.1
Synonym Sb09g030230
Functional annotation cytochrome c oxidase subunit 5B, mitochondrial precursor, putative, expressed
UniProt A0A1B6PAD6
Pfam PF01215
Panther DB PTHR10122 PTHR10122:SF3
NCBI CDD KOG3352; Cytochrome c oxidase, subunit Vb/COX4
KEGG Orthology K02265; cytochrome c oxidase subunit 5b
Gene Ontology GO:0005740; mitochondrial envelope GO:0004129cytochrome-c oxidase activity


Orthologs (automatic annotation)
TAIR AT1G80230 : Rubredoxin-like superfamily protein
RAP-DB (Rice) LOC_Os01g42650.1 : cytochrome c oxidase subunit 5B, mitochondrial precursor, putative, expressed
MaizeGDB (Corn) Zm00025a036754
Brachypodium -
Barley -
Wheat TraesCS3B02G249500 , TraesCS3D02G233400 , TraesCS3A02G219100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G282700 protein kri1, putative, expressed K14786: protein KRI1
2 Sobic.010G025100 HORMA domain containing protein, putative, expressed -
3 Sobic.007G188200 OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed -
4 Sobic.010G042700 expressed protein -
5 Sobic.001G197100 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
6 Sobic.002G293400 prostatic spermine-binding protein precursor, putative, expressed -
7 Sobic.003G119100 tetratricopeptide-like helical, putative, expressed -
8 Sobic.002G240400 - -
9 Sobic.010G241600 RNASEH2A - Putative ribonuclease H2 large subunit, expressed K10743: ribonuclease H2 subunit A
10 Sobic.004G027700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide-like helical, putative, expressed -
11 Sobic.001G106300 fanconi anemia L, putative, expressed K10606: FANCL, E3 ubiquitin-protein ligase FANCL
12 Sobic.002G057050 - -
13 Sobic.003G315000 homeobox-leucine zipper protein ATHB-54, putative, expressed -
14 Sobic.007G038250 - -
15 Sobic.010G237800 ZOS1-21 - C2H2 zinc finger protein, expressed -
16 Sobic.010G047000 transport protein particle component, Bet3, domain containing protein, expressed -
17 Sobic.003G396800 expressed protein K17413: small subunit ribosomal protein S35
18 Sobic.005G034200 OsFBX114 - F-box domain containing protein, expressed -
19 Sobic.003G289700 ulp1 protease family protein, putative, expressed K16287: ubiquitin-like-specific protease 1C/D
20 Sobic.008G031200 pentatricopeptide, putative, expressed -


Gene co-expression network
sample Sobic009G251600 Sobic009G251600 Sobic003G282700 Sobic003G282700 Sobic009G251600--Sobic003G282700 Sobic010G025100 Sobic010G025100 Sobic009G251600--Sobic010G025100 Sobic007G188200 Sobic007G188200 Sobic009G251600--Sobic007G188200 Sobic010G042700 Sobic010G042700 Sobic009G251600--Sobic010G042700 Sobic001G197100 Sobic001G197100 Sobic009G251600--Sobic001G197100 Sobic002G293400 Sobic002G293400 Sobic009G251600--Sobic002G293400 Sobic003G119100 Sobic003G119100 Sobic009G251600--Sobic003G119100 Sobic002G240400 Sobic002G240400 Sobic009G251600--Sobic002G240400 Sobic010G241600 Sobic010G241600 Sobic009G251600--Sobic010G241600 Sobic003G282700--Sobic007G188200 Sobic003G349000 Sobic003G349000 Sobic003G282700--Sobic003G349000 Sobic003G282700--Sobic010G241600 Sobic007G053700 Sobic007G053700 Sobic003G282700--Sobic007G053700 Sobic004G027700 Sobic004G027700 Sobic003G282700--Sobic004G027700 Sobic003G072500 Sobic003G072500 Sobic003G282700--Sobic003G072500 Sobic002G154400 Sobic002G154400 Sobic003G282700--Sobic002G154400 Sobic001G177400 Sobic001G177400 Sobic003G282700--Sobic001G177400 Sobic010G237800 Sobic010G237800 Sobic003G282700--Sobic010G237800 Sobic010G215400 Sobic010G215400 Sobic010G025100--Sobic010G215400 Sobic003G256300 Sobic003G256300 Sobic010G025100--Sobic003G256300 Sobic006G096800 Sobic006G096800 Sobic010G025100--Sobic006G096800 Sobic001G443300 Sobic001G443300 Sobic010G025100--Sobic001G443300 Sobic001G125600 Sobic001G125600 Sobic010G025100--Sobic001G125600 Sobic008G131651 Sobic008G131651 Sobic010G025100--Sobic008G131651 Sobic002G057050 Sobic002G057050 Sobic010G025100--Sobic002G057050 Sobic008G012500 Sobic008G012500 Sobic010G025100--Sobic008G012500 Sobic008G023801 Sobic008G023801 Sobic010G025100--Sobic008G023801 Sobic007G188200--Sobic003G282700 Sobic003G397100 Sobic003G397100 Sobic007G188200--Sobic003G397100 Sobic007G188200--Sobic004G027700 Sobic002G429700 Sobic002G429700 Sobic007G188200--Sobic002G429700 Sobic001G039300 Sobic001G039300 Sobic007G188200--Sobic001G039300 Sobic006G250100 Sobic006G250100 Sobic007G188200--Sobic006G250100 Sobic004G233600 Sobic004G233600 Sobic007G188200--Sobic004G233600 Sobic001G088900 Sobic001G088900 Sobic007G188200--Sobic001G088900 Sobic009G216500 Sobic009G216500 Sobic007G188200--Sobic009G216500 Sobic010G042700--Sobic009G216500 Sobic003G067201 Sobic003G067201 Sobic010G042700--Sobic003G067201 Sobic003G289700 Sobic003G289700 Sobic010G042700--Sobic003G289700 Sobic004G020900 Sobic004G020900 Sobic010G042700--Sobic004G020900 Sobic010G042700--Sobic007G053700 Sobic010G042700--Sobic002G057050 Sobic002G239601 Sobic002G239601 Sobic010G042700--Sobic002G239601 Sobic001G541000 Sobic001G541000 Sobic010G042700--Sobic001G541000 Sobic001G496600 Sobic001G496600 Sobic010G042700--Sobic001G496600 Sobic001G534466 Sobic001G534466 Sobic001G197100--Sobic001G534466 Sobic001G529500 Sobic001G529500 Sobic001G197100--Sobic001G529500 Sobic008G031200 Sobic008G031200 Sobic001G197100--Sobic008G031200 Sobic004G084200 Sobic004G084200 Sobic001G197100--Sobic004G084200 Sobic003G359400 Sobic003G359400 Sobic001G197100--Sobic003G359400 Sobic004G298600 Sobic004G298600 Sobic001G197100--Sobic004G298600 Sobic004G313700 Sobic004G313700 Sobic001G197100--Sobic004G313700 Sobic006G219801 Sobic006G219801 Sobic001G197100--Sobic006G219801 Sobic010G252200 Sobic010G252200 Sobic001G197100--Sobic010G252200 Sobic001G141700 Sobic001G141700 Sobic002G293400--Sobic001G141700 Sobic002G293400--Sobic002G240400 Sobic001G541500 Sobic001G541500 Sobic002G293400--Sobic001G541500 Sobic004G068200 Sobic004G068200 Sobic002G293400--Sobic004G068200 Sobic002G293400--Sobic003G349000 Sobic002G293400--Sobic003G282700 Sobic002G293400--Sobic010G241600 Sobic002G293400--Sobic010G237800 Sobic009G172100 Sobic009G172100 Sobic002G293400--Sobic009G172100 Sobic004G174800 Sobic004G174800 Sobic003G119100--Sobic004G174800 Sobic008G082800 Sobic008G082800 Sobic003G119100--Sobic008G082800 Sobic007G208400 Sobic007G208400 Sobic003G119100--Sobic007G208400 Sobic003G119100--Sobic009G251600 Sobic009G076900 Sobic009G076900 Sobic003G119100--Sobic009G076900 Sobic004G346200 Sobic004G346200 Sobic003G119100--Sobic004G346200 Sobic001G450300 Sobic001G450300 Sobic003G119100--Sobic001G450300 Sobic003G119100--Sobic002G057050 Sobic009G063450 Sobic009G063450 Sobic003G119100--Sobic009G063450 Sobic002G240400--Sobic002G293400 Sobic003G278633 Sobic003G278633 Sobic002G240400--Sobic003G278633 Sobic001G435100 Sobic001G435100 Sobic002G240400--Sobic001G435100 Sobic003G315000 Sobic003G315000 Sobic002G240400--Sobic003G315000 Sobic008G127250 Sobic008G127250 Sobic002G240400--Sobic008G127250 Sobic002G240400--Sobic009G251600 Sobic002G240400--Sobic003G349000 Sobic002G240400--Sobic003G282700 Sobic002G312800 Sobic002G312800 Sobic002G240400--Sobic002G312800 Sobic001G466600 Sobic001G466600 Sobic010G241600--Sobic001G466600 Sobic010G241600--Sobic010G237800 Sobic010G241600--Sobic003G282700 Sobic010G241600--Sobic001G141700 Sobic006G106200 Sobic006G106200 Sobic010G241600--Sobic006G106200 Sobic004G350200 Sobic004G350200 Sobic010G241600--Sobic004G350200 Sobic010G241600--Sobic002G312800 Sobic010G241600--Sobic003G349000 Sobic010G021900 Sobic010G021900 Sobic010G241600--Sobic010G021900
Octagon: transcription factors


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