Gene annotation
Transcriptome id Sobic.001G197100.1
Synonym Sb01g017350
Functional annotation ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed
UniProt C5WW91
Pfam PF11955
Panther DB PTHR31476 PTHR31476:SF15
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G06440 : Ubiquitin carboxyl-terminal hydrolase family protein
RAP-DB (Rice) LOC_Os10g36680.1 : ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed
MaizeGDB (Corn) Zm00025a006348
Brachypodium KQJ97421 , KQJ97422 , PNT67695
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G534466 - -
2 Sobic.001G529500 PPR repeat domain containing protein, putative, expressed -
3 Sobic.008G031200 pentatricopeptide, putative, expressed -
4 Sobic.004G084200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@calcium-binding mitochondrial carrier CBG00135, putative, expressed K14684: solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41
5 Sobic.003G359400 PPR repeat containing protein, expressed -
6 Sobic.004G298600 histone-lysine N-methyltransferase, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
7 Sobic.004G313700 acetyltransferase, GNAT family, putative, expressed -
8 Sobic.006G219801 - -
9 Sobic.010G252200 PPR repeat domain containing protein, putative, expressed -
10 Sobic.003G439700 ATXR, putative, expressed -
11 Sobic.002G173400 expressed protein -
12 Sobic.004G000400 OsPDIL1-4 protein disulfide isomerase PDIL1-4, expressed K09580: PDIA1, protein disulfide-isomerase A1
13 Sobic.003G204100 expressed protein -
14 Sobic.005G078700 OsFBX411 - F-box domain containing protein, expressed -
15 Sobic.008G131900 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@resistance protein LR10, putative, expressed -
16 Sobic.004G027700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tetratricopeptide-like helical, putative, expressed -
17 Sobic.002G286632 - -
18 Sobic.007G038250 - -
19 Sobic.008G047500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.001G433600 - -


Gene co-expression network
sample Sobic001G197100 Sobic001G197100 Sobic001G534466 Sobic001G534466 Sobic001G197100--Sobic001G534466 Sobic001G529500 Sobic001G529500 Sobic001G197100--Sobic001G529500 Sobic008G031200 Sobic008G031200 Sobic001G197100--Sobic008G031200 Sobic004G084200 Sobic004G084200 Sobic001G197100--Sobic004G084200 Sobic003G359400 Sobic003G359400 Sobic001G197100--Sobic003G359400 Sobic004G298600 Sobic004G298600 Sobic001G197100--Sobic004G298600 Sobic004G313700 Sobic004G313700 Sobic001G197100--Sobic004G313700 Sobic006G219801 Sobic006G219801 Sobic001G197100--Sobic006G219801 Sobic010G252200 Sobic010G252200 Sobic001G197100--Sobic010G252200 Sobic001G534466--Sobic004G298600 Sobic001G433600 Sobic001G433600 Sobic001G534466--Sobic001G433600 Sobic006G189000 Sobic006G189000 Sobic001G534466--Sobic006G189000 Sobic001G380700 Sobic001G380700 Sobic001G534466--Sobic001G380700 Sobic001G117900 Sobic001G117900 Sobic001G534466--Sobic001G117900 Sobic005G210500 Sobic005G210500 Sobic001G534466--Sobic005G210500 Sobic010G009700 Sobic010G009700 Sobic001G534466--Sobic010G009700 Sobic002G286632 Sobic002G286632 Sobic001G534466--Sobic002G286632 Sobic009G054400 Sobic009G054400 Sobic001G534466--Sobic009G054400 Sobic001G529500--Sobic005G210500 Sobic001G327100 Sobic001G327100 Sobic001G529500--Sobic001G327100 Sobic001G486600 Sobic001G486600 Sobic001G529500--Sobic001G486600 Sobic010G147500 Sobic010G147500 Sobic001G529500--Sobic010G147500 Sobic001G268300 Sobic001G268300 Sobic001G529500--Sobic001G268300 Sobic010G188900 Sobic010G188900 Sobic001G529500--Sobic010G188900 Sobic001G203600 Sobic001G203600 Sobic001G529500--Sobic001G203600 Sobic001G023600 Sobic001G023600 Sobic001G529500--Sobic001G023600 Sobic003G418400 Sobic003G418400 Sobic001G529500--Sobic003G418400 Sobic008G179000 Sobic008G179000 Sobic008G031200--Sobic008G179000 Sobic008G031200--Sobic001G268300 Sobic010G252700 Sobic010G252700 Sobic008G031200--Sobic010G252700 Sobic002G362200 Sobic002G362200 Sobic008G031200--Sobic002G362200 Sobic003G397100 Sobic003G397100 Sobic008G031200--Sobic003G397100 Sobic003G153900 Sobic003G153900 Sobic008G031200--Sobic003G153900 Sobic002G084400 Sobic002G084400 Sobic008G031200--Sobic002G084400 Sobic001G537400 Sobic001G537400 Sobic008G031200--Sobic001G537400 Sobic002G123600 Sobic002G123600 Sobic008G031200--Sobic002G123600 Sobic002G260700 Sobic002G260700 Sobic004G084200--Sobic002G260700 Sobic004G306100 Sobic004G306100 Sobic004G084200--Sobic004G306100 Sobic006G127200 Sobic006G127200 Sobic004G084200--Sobic006G127200 Sobic004G084200--Sobic010G252200 Sobic010G103500 Sobic010G103500 Sobic004G084200--Sobic010G103500 Sobic004G000400 Sobic004G000400 Sobic004G084200--Sobic004G000400 Sobic006G126800 Sobic006G126800 Sobic004G084200--Sobic006G126800 Sobic001G381500 Sobic001G381500 Sobic004G084200--Sobic001G381500 Sobic009G081800 Sobic009G081800 Sobic004G084200--Sobic009G081800 Sobic003G067201 Sobic003G067201 Sobic003G359400--Sobic003G067201 Sobic001G033600 Sobic001G033600 Sobic003G359400--Sobic001G033600 Sobic009G042000 Sobic009G042000 Sobic003G359400--Sobic009G042000 Sobic005G123400 Sobic005G123400 Sobic003G359400--Sobic005G123400 Sobic003G396800 Sobic003G396800 Sobic003G359400--Sobic003G396800 Sobic004G070100 Sobic004G070100 Sobic003G359400--Sobic004G070100 Sobic010G190900 Sobic010G190900 Sobic003G359400--Sobic010G190900 Sobic006G191200 Sobic006G191200 Sobic003G359400--Sobic006G191200 Sobic003G393200 Sobic003G393200 Sobic003G359400--Sobic003G393200 Sobic001G385300 Sobic001G385300 Sobic004G298600--Sobic001G385300 Sobic001G131900 Sobic001G131900 Sobic004G298600--Sobic001G131900 Sobic003G293400 Sobic003G293400 Sobic004G298600--Sobic003G293400 Sobic004G026600 Sobic004G026600 Sobic004G298600--Sobic004G026600 Sobic005G060100 Sobic005G060100 Sobic004G298600--Sobic005G060100 Sobic001G308500 Sobic001G308500 Sobic004G298600--Sobic001G308500 Sobic004G298600--Sobic001G433600 Sobic007G105700 Sobic007G105700 Sobic004G298600--Sobic007G105700 Sobic003G352900 Sobic003G352900 Sobic004G298600--Sobic003G352900 Sobic003G028400 Sobic003G028400 Sobic004G313700--Sobic003G028400 Sobic004G313700--Sobic001G268300 Sobic004G313700--Sobic008G031200 Sobic002G239601 Sobic002G239601 Sobic004G313700--Sobic002G239601 Sobic003G235700 Sobic003G235700 Sobic004G313700--Sobic003G235700 Sobic004G129500 Sobic004G129500 Sobic004G313700--Sobic004G129500 Sobic004G313700--Sobic001G537400 Sobic003G392100 Sobic003G392100 Sobic004G313700--Sobic003G392100 Sobic003G144000 Sobic003G144000 Sobic004G313700--Sobic003G144000 Sobic004G051600 Sobic004G051600 Sobic006G219801--Sobic004G051600 Sobic010G181701 Sobic010G181701 Sobic006G219801--Sobic010G181701 Sobic006G219801--Sobic004G298600 Sobic001G457500 Sobic001G457500 Sobic006G219801--Sobic001G457500 Sobic009G047066 Sobic009G047066 Sobic006G219801--Sobic009G047066 Sobic002G339666 Sobic002G339666 Sobic006G219801--Sobic002G339666 Sobic006G219801--Sobic001G385300 Sobic009G163100 Sobic009G163100 Sobic006G219801--Sobic009G163100 Sobic010G123100 Sobic010G123100 Sobic006G219801--Sobic010G123100 Sobic010G252200--Sobic006G126800 Sobic010G252200--Sobic005G210500 Sobic010G252200--Sobic009G081800 Sobic010G252200--Sobic001G486600 Sobic003G184666 Sobic003G184666 Sobic010G252200--Sobic003G184666 Sobic006G119300 Sobic006G119300 Sobic010G252200--Sobic006G119300 Sobic010G252200--Sobic001G268300 Sobic010G252200--Sobic002G362200 Sobic003G045450 Sobic003G045450 Sobic010G252200--Sobic003G045450
Octagon: transcription factors


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