Gene annotation
Transcriptome id Sobic.003G439700.1
Synonym SDG34, Sb03g046950, ATXR6
Functional annotation ATXR, putative, expressed
UniProt C5XJ98
Pfam PF00628
Panther DB PTHR10615 PTHR10615:SF112
NCBI CDD KOG1085; Predicted methyltransferase (contains a SET domain)
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G09790 : ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5
RAP-DB (Rice) LOC_Os01g73460.1 : ATXR, putative, expressed
MaizeGDB (Corn) Zm00025a039064
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G439700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G210500 - K10901: BLM, RECQL3, bloom syndrome protein
2 Sobic.004G293400 expressed protein -
3 Sobic.002G123600 expressed protein -
4 Sobic.001G534466 - -
5 Sobic.001G486600 RFC4 - Putative clamp loader of PCNA, replication factor C subunit 4, expressed K10755: replication factor C subunit 2/4
6 Sobic.002G308000 powdery mildew resistant protein 5, putative, expressed -
7 Sobic.001G117900 CAMK_KIN1/SNF1/Nim1_like.18 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07359: calcium/calmodulin-dependent protein kinase kinase 2
8 Sobic.001G433600 - -
9 Sobic.001G268300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@queuine tRNA-ribosyltransferase, putative, expressed K15407: queuine tRNA-ribosyltransferase subunit QTRTD1
10 Sobic.008G004900 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
11 Sobic.008G131900 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@resistance protein LR10, putative, expressed -
12 Sobic.004G298600 histone-lysine N-methyltransferase, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
13 Sobic.003G418400 expressed protein -
14 Sobic.001G529500 PPR repeat domain containing protein, putative, expressed -
15 Sobic.003G354500 methyltransferase, putative, expressed -
16 Sobic.002G336400 OsFBLD4 - F-box, LRR and FBD domain containing protein, expressed -
17 Sobic.002G241100 glycosyl transferase 8 domain containing protein, putative, expressed -
18 Sobic.010G038200 CDT1A - Putative DNA replication initiation protein, expressed K10727: chromatin licensing and DNA replication factor 1
19 Sobic.004G306100 expressed protein -
20 Sobic.010G188900 PPR repeat domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G439700 Sobic003G439700 Sobic005G210500 Sobic005G210500 Sobic003G439700--Sobic005G210500 Sobic004G293400 Sobic004G293400 Sobic003G439700--Sobic004G293400 Sobic002G123600 Sobic002G123600 Sobic003G439700--Sobic002G123600 Sobic001G534466 Sobic001G534466 Sobic003G439700--Sobic001G534466 Sobic001G486600 Sobic001G486600 Sobic003G439700--Sobic001G486600 Sobic002G308000 Sobic002G308000 Sobic003G439700--Sobic002G308000 Sobic001G117900 Sobic001G117900 Sobic003G439700--Sobic001G117900 Sobic001G433600 Sobic001G433600 Sobic003G439700--Sobic001G433600 Sobic001G268300 Sobic001G268300 Sobic003G439700--Sobic001G268300 Sobic003G418400 Sobic003G418400 Sobic005G210500--Sobic003G418400 Sobic005G210500--Sobic001G486600 Sobic009G214500 Sobic009G214500 Sobic005G210500--Sobic009G214500 Sobic010G038200 Sobic010G038200 Sobic005G210500--Sobic010G038200 Sobic005G210500--Sobic001G117900 Sobic003G005500 Sobic003G005500 Sobic005G210500--Sobic003G005500 Sobic010G252200 Sobic010G252200 Sobic005G210500--Sobic010G252200 Sobic007G102300 Sobic007G102300 Sobic005G210500--Sobic007G102300 Sobic010G030000 Sobic010G030000 Sobic005G210500--Sobic010G030000 Sobic009G066200 Sobic009G066200 Sobic004G293400--Sobic009G066200 Sobic001G309200 Sobic001G309200 Sobic004G293400--Sobic001G309200 Sobic002G239400 Sobic002G239400 Sobic004G293400--Sobic002G239400 Sobic008G112100 Sobic008G112100 Sobic004G293400--Sobic008G112100 Sobic002G348400 Sobic002G348400 Sobic004G293400--Sobic002G348400 Sobic004G293400--Sobic003G439700 Sobic004G293400--Sobic001G433600 Sobic002G241100 Sobic002G241100 Sobic004G293400--Sobic002G241100 Sobic001G440000 Sobic001G440000 Sobic004G293400--Sobic001G440000 Sobic006G127200 Sobic006G127200 Sobic002G123600--Sobic006G127200 Sobic008G090400 Sobic008G090400 Sobic002G123600--Sobic008G090400 Sobic004G306100 Sobic004G306100 Sobic002G123600--Sobic004G306100 Sobic002G095300 Sobic002G095300 Sobic002G123600--Sobic002G095300 Sobic002G271400 Sobic002G271400 Sobic002G123600--Sobic002G271400 Sobic003G397100 Sobic003G397100 Sobic002G123600--Sobic003G397100 Sobic001G242300 Sobic001G242300 Sobic002G123600--Sobic001G242300 Sobic003G411700 Sobic003G411700 Sobic002G123600--Sobic003G411700 Sobic004G129500 Sobic004G129500 Sobic002G123600--Sobic004G129500 Sobic004G298600 Sobic004G298600 Sobic001G534466--Sobic004G298600 Sobic001G534466--Sobic001G433600 Sobic006G189000 Sobic006G189000 Sobic001G534466--Sobic006G189000 Sobic001G380700 Sobic001G380700 Sobic001G534466--Sobic001G380700 Sobic001G534466--Sobic001G117900 Sobic001G534466--Sobic005G210500 Sobic010G009700 Sobic010G009700 Sobic001G534466--Sobic010G009700 Sobic002G286632 Sobic002G286632 Sobic001G534466--Sobic002G286632 Sobic009G054400 Sobic009G054400 Sobic001G534466--Sobic009G054400 Sobic001G486600--Sobic005G210500 Sobic008G131900 Sobic008G131900 Sobic001G486600--Sobic008G131900 Sobic001G486600--Sobic010G038200 Sobic002G173400 Sobic002G173400 Sobic001G486600--Sobic002G173400 Sobic006G119300 Sobic006G119300 Sobic001G486600--Sobic006G119300 Sobic008G047500 Sobic008G047500 Sobic001G486600--Sobic008G047500 Sobic001G486600--Sobic010G030000 Sobic001G486600--Sobic010G252200 Sobic003G204100 Sobic003G204100 Sobic001G486600--Sobic003G204100 Sobic002G392400 Sobic002G392400 Sobic002G308000--Sobic002G392400 Sobic007G105700 Sobic007G105700 Sobic002G308000--Sobic007G105700 Sobic002G308000--Sobic001G117900 Sobic002G308000--Sobic001G433600 Sobic003G293400 Sobic003G293400 Sobic002G308000--Sobic003G293400 Sobic010G253200 Sobic010G253200 Sobic002G308000--Sobic010G253200 Sobic001G131900 Sobic001G131900 Sobic002G308000--Sobic001G131900 Sobic007G111300 Sobic007G111300 Sobic002G308000--Sobic007G111300 Sobic002G192900 Sobic002G192900 Sobic002G308000--Sobic002G192900 Sobic001G117900--Sobic002G308000 Sobic001G117900--Sobic001G433600 Sobic001G117900--Sobic002G392400 Sobic007G086600 Sobic007G086600 Sobic001G117900--Sobic007G086600 Sobic005G060100 Sobic005G060100 Sobic001G117900--Sobic005G060100 Sobic001G117900--Sobic007G105700 Sobic001G117900--Sobic002G348400 Sobic009G025700 Sobic009G025700 Sobic001G117900--Sobic009G025700 Sobic003G004800 Sobic003G004800 Sobic001G117900--Sobic003G004800 Sobic001G433600--Sobic001G117900 Sobic001G433600--Sobic002G308000 Sobic001G433600--Sobic005G060100 Sobic001G433600--Sobic007G105700 Sobic001G433600--Sobic009G054400 Sobic001G433600--Sobic004G298600 Sobic007G189100 Sobic007G189100 Sobic001G433600--Sobic007G189100 Sobic001G433600--Sobic001G131900 Sobic001G433600--Sobic007G086600 Sobic009G041800 Sobic009G041800 Sobic001G268300--Sobic009G041800 Sobic008G179000 Sobic008G179000 Sobic001G268300--Sobic008G179000 Sobic006G262800 Sobic006G262800 Sobic001G268300--Sobic006G262800 Sobic002G362200 Sobic002G362200 Sobic001G268300--Sobic002G362200 Sobic008G031200 Sobic008G031200 Sobic001G268300--Sobic008G031200 Sobic003G142400 Sobic003G142400 Sobic001G268300--Sobic003G142400 Sobic001G268300--Sobic010G252200 Sobic004G282500 Sobic004G282500 Sobic001G268300--Sobic004G282500 Sobic005G078700 Sobic005G078700 Sobic001G268300--Sobic005G078700
Octagon: transcription factors


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