Gene annotation
Transcriptome id Sobic.004G293400.1
Synonym Sb04g032730
Functional annotation expressed protein
UniProt C5Y1H4
Pfam PF14144
Panther DB PTHR22952 PTHR22952:SF17
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006351; transcription, DNA-templated


Orthologs (automatic annotation)
TAIR AT4G22600 : -
RAP-DB (Rice) LOC_Os02g44250.1 : expressed protein
MaizeGDB (Corn) Zm00025a025469 , Zm00025a021393 , Zm00025a013459
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G066200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@uncharacterized protein At4g06744 precursor, putative, expressed -
2 Sobic.001G309200 fatty acid hydroxylase, putative, expressed K14423: plant 4,4-dimethylsterol C-4alpha-methyl-monooxygenase
3 Sobic.002G239400 OsFBX338 - F-box domain containing protein, expressed -
4 Sobic.008G112100 Phospholipid synthesis protein 1 PLS1 (Zm)(PubMedID : 27208977)@acyltransferase, putative, expressed K13523: lysophosphatidic acid acyltransferase / lysophosphatidylinositol acyltransferase
5 Sobic.002G348400 adenylyl-sulfate kinase, putative, expressed K00860: adenylylsulfate kinase
6 Sobic.003G439700 ATXR, putative, expressed -
7 Sobic.001G433600 - -
8 Sobic.002G241100 glycosyl transferase 8 domain containing protein, putative, expressed -
9 Sobic.001G440000 ras-related protein, putative, expressed K07933: Rab-like protein 3
10 Sobic.001G117900 CAMK_KIN1/SNF1/Nim1_like.18 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07359: calcium/calmodulin-dependent protein kinase kinase 2
11 Sobic.002G336400 OsFBLD4 - F-box, LRR and FBD domain containing protein, expressed -
12 Sobic.002G308000 powdery mildew resistant protein 5, putative, expressed -
13 Sobic.003G354500 methyltransferase, putative, expressed -
14 Sobic.009G054400 ECT protein, putative, expressed -
15 Sobic.004G353300 growth regulator related protein, putative, expressed -
16 Sobic.007G010200 - -
17 Sobic.001G131900 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
18 Sobic.002G123600 expressed protein -
19 Sobic.010G153400 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
20 Sobic.008G087200 argonaute, putative, expressed K11593: ELF2C, eukaryotic translation initiation factor 2C


Gene co-expression network
sample Sobic004G293400 Sobic004G293400 Sobic009G066200 Sobic009G066200 Sobic004G293400--Sobic009G066200 Sobic001G309200 Sobic001G309200 Sobic004G293400--Sobic001G309200 Sobic002G239400 Sobic002G239400 Sobic004G293400--Sobic002G239400 Sobic008G112100 Sobic008G112100 Sobic004G293400--Sobic008G112100 Sobic002G348400 Sobic002G348400 Sobic004G293400--Sobic002G348400 Sobic003G439700 Sobic003G439700 Sobic004G293400--Sobic003G439700 Sobic001G433600 Sobic001G433600 Sobic004G293400--Sobic001G433600 Sobic002G241100 Sobic002G241100 Sobic004G293400--Sobic002G241100 Sobic001G440000 Sobic001G440000 Sobic004G293400--Sobic001G440000 Sobic001G131900 Sobic001G131900 Sobic009G066200--Sobic001G131900 Sobic002G322700 Sobic002G322700 Sobic009G066200--Sobic002G322700 Sobic009G066200--Sobic001G309200 Sobic005G045800 Sobic005G045800 Sobic009G066200--Sobic005G045800 Sobic009G066200--Sobic002G348400 Sobic006G265800 Sobic006G265800 Sobic009G066200--Sobic006G265800 Sobic009G066200--Sobic001G433600 Sobic004G298600 Sobic004G298600 Sobic009G066200--Sobic004G298600 Sobic001G385300 Sobic001G385300 Sobic009G066200--Sobic001G385300 Sobic001G309200--Sobic002G348400 Sobic001G188000 Sobic001G188000 Sobic001G309200--Sobic001G188000 Sobic003G260600 Sobic003G260600 Sobic001G309200--Sobic003G260600 Sobic001G117900 Sobic001G117900 Sobic001G309200--Sobic001G117900 Sobic001G309200--Sobic009G066200 Sobic002G308000 Sobic002G308000 Sobic001G309200--Sobic002G308000 Sobic002G392400 Sobic002G392400 Sobic001G309200--Sobic002G392400 Sobic010G153400 Sobic010G153400 Sobic001G309200--Sobic010G153400 Sobic007G086600 Sobic007G086600 Sobic001G309200--Sobic007G086600 Sobic004G213400 Sobic004G213400 Sobic002G239400--Sobic004G213400 Sobic002G239400--Sobic002G348400 Sobic002G239400--Sobic001G131900 Sobic002G239400--Sobic001G117900 Sobic002G239400--Sobic002G392400 Sobic003G293400 Sobic003G293400 Sobic002G239400--Sobic003G293400 Sobic007G105700 Sobic007G105700 Sobic002G239400--Sobic007G105700 Sobic009G054400 Sobic009G054400 Sobic002G239400--Sobic009G054400 Sobic005G048600 Sobic005G048600 Sobic002G239400--Sobic005G048600 Sobic008G112100--Sobic009G054400 Sobic003G397100 Sobic003G397100 Sobic008G112100--Sobic003G397100 Sobic007G036800 Sobic007G036800 Sobic008G112100--Sobic007G036800 Sobic007G010200 Sobic007G010200 Sobic008G112100--Sobic007G010200 Sobic008G112100--Sobic001G433600 Sobic008G087200 Sobic008G087200 Sobic008G112100--Sobic008G087200 Sobic002G123600 Sobic002G123600 Sobic008G112100--Sobic002G123600 Sobic008G112100--Sobic004G293400 Sobic001G381500 Sobic001G381500 Sobic008G112100--Sobic001G381500 Sobic002G348400--Sobic010G153400 Sobic002G348400--Sobic002G392400 Sobic002G348400--Sobic007G086600 Sobic002G348400--Sobic001G117900 Sobic001G305900 Sobic001G305900 Sobic002G348400--Sobic001G305900 Sobic002G348400--Sobic001G309200 Sobic001G280500 Sobic001G280500 Sobic002G348400--Sobic001G280500 Sobic003G004800 Sobic003G004800 Sobic002G348400--Sobic003G004800 Sobic002G348400--Sobic001G188000 Sobic005G210500 Sobic005G210500 Sobic003G439700--Sobic005G210500 Sobic003G439700--Sobic004G293400 Sobic003G439700--Sobic002G123600 Sobic001G534466 Sobic001G534466 Sobic003G439700--Sobic001G534466 Sobic001G486600 Sobic001G486600 Sobic003G439700--Sobic001G486600 Sobic003G439700--Sobic002G308000 Sobic003G439700--Sobic001G117900 Sobic003G439700--Sobic001G433600 Sobic001G268300 Sobic001G268300 Sobic003G439700--Sobic001G268300 Sobic001G433600--Sobic001G117900 Sobic001G433600--Sobic002G308000 Sobic005G060100 Sobic005G060100 Sobic001G433600--Sobic005G060100 Sobic001G433600--Sobic007G105700 Sobic001G433600--Sobic009G054400 Sobic001G433600--Sobic004G298600 Sobic007G189100 Sobic007G189100 Sobic001G433600--Sobic007G189100 Sobic001G433600--Sobic001G131900 Sobic001G433600--Sobic007G086600 Sobic002G241100--Sobic001G131900 Sobic002G241100--Sobic001G433600 Sobic002G241100--Sobic002G392400 Sobic002G241100--Sobic002G308000 Sobic002G241100--Sobic007G189100 Sobic002G241100--Sobic001G117900 Sobic003G285700 Sobic003G285700 Sobic002G241100--Sobic003G285700 Sobic002G241100--Sobic009G054400 Sobic002G241100--Sobic007G105700 Sobic001G440000--Sobic002G239400 Sobic001G440000--Sobic010G153400 Sobic001G440000--Sobic009G066200 Sobic001G440000--Sobic004G298600 Sobic001G440000--Sobic001G131900 Sobic003G435300 Sobic003G435300 Sobic001G440000--Sobic003G435300 Sobic001G440000--Sobic004G213400 Sobic001G091701 Sobic001G091701 Sobic001G440000--Sobic001G091701 Sobic001G440000--Sobic002G392400
Octagon: transcription factors


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