Gene annotation
Transcriptome id Sobic.001G458000.1
Synonym Sb01g043000
Functional annotation expressed protein
UniProt C5WSU2
Pfam -
Panther DB PTHR15827
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G07950 : -
RAP-DB (Rice) LOC_Os03g11450.1 : expressed protein
MaizeGDB (Corn) Zm00025a053088 , Zm00025a053093
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G202000 COBW domain containing protein, putative, expressed -
2 Sobic.010G233000 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
3 Sobic.005G036200 protein of unknown function containing protein, expressed -
4 Sobic.003G122800 translin, putative, expressed -
5 Sobic.007G192200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@LTPL80 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
6 Sobic.006G262501 - -
7 Sobic.009G177200 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
8 Sobic.001G039300 GTPase of unknown function domain containing protein, putative, expressed -
9 Sobic.001G005800 - K10885: XRCC5, KU80, ATP-dependent DNA helicase 2 subunit 2
10 Sobic.003G349000 ruvB-like, putative, expressed K04499: RUVBL1, RVB1, RuvB-like protein 1 (pontin 52)
11 Sobic.009G216500 expressed protein -
12 Sobic.004G148900 ankyrin, putative, expressed -
13 Sobic.009G032200 DNA methyltransferase protein, putative, expressed -
14 Sobic.004G242200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nucleobase-ascorbate transporter, putative, expressed -
15 Sobic.010G264900 OsFBX79 - F-box domain containing protein, expressed -
16 Sobic.005G034200 OsFBX114 - F-box domain containing protein, expressed -
17 Sobic.003G282700 protein kri1, putative, expressed K14786: protein KRI1
18 Sobic.010G097500 DNA polymerase lambda, putative, expressed K03512: DNA polymerase lambda
19 Sobic.008G175400 U-box domain-containing protein, putative, expressed -
20 Sobic.004G240000 phosphoenolpyruvate carboxylase kinase, putative, expressed -


Gene co-expression network
sample Sobic001G458000 Sobic001G458000 Sobic006G202000 Sobic006G202000 Sobic001G458000--Sobic006G202000 Sobic010G233000 Sobic010G233000 Sobic001G458000--Sobic010G233000 Sobic005G036200 Sobic005G036200 Sobic001G458000--Sobic005G036200 Sobic003G122800 Sobic003G122800 Sobic001G458000--Sobic003G122800 Sobic007G192200 Sobic007G192200 Sobic001G458000--Sobic007G192200 Sobic006G262501 Sobic006G262501 Sobic001G458000--Sobic006G262501 Sobic009G177200 Sobic009G177200 Sobic001G458000--Sobic009G177200 Sobic001G039300 Sobic001G039300 Sobic001G458000--Sobic001G039300 Sobic001G005800 Sobic001G005800 Sobic001G458000--Sobic001G005800 Sobic002G168000 Sobic002G168000 Sobic006G202000--Sobic002G168000 Sobic009G060600 Sobic009G060600 Sobic006G202000--Sobic009G060600 Sobic004G240000 Sobic004G240000 Sobic006G202000--Sobic004G240000 Sobic001G027500 Sobic001G027500 Sobic006G202000--Sobic001G027500 Sobic003G140800 Sobic003G140800 Sobic006G202000--Sobic003G140800 Sobic007G187700 Sobic007G187700 Sobic006G202000--Sobic007G187700 Sobic006G226000 Sobic006G226000 Sobic006G202000--Sobic006G226000 Sobic006G202000--Sobic006G262501 Sobic006G202000--Sobic001G458000 Sobic009G032200 Sobic009G032200 Sobic010G233000--Sobic009G032200 Sobic004G006600 Sobic004G006600 Sobic010G233000--Sobic004G006600 Sobic004G043750 Sobic004G043750 Sobic010G233000--Sobic004G043750 Sobic001G484200 Sobic001G484200 Sobic010G233000--Sobic001G484200 Sobic004G177600 Sobic004G177600 Sobic010G233000--Sobic004G177600 Sobic010G236200 Sobic010G236200 Sobic010G233000--Sobic010G236200 Sobic008G057000 Sobic008G057000 Sobic010G233000--Sobic008G057000 Sobic010G215900 Sobic010G215900 Sobic010G233000--Sobic010G215900 Sobic003G221500 Sobic003G221500 Sobic010G233000--Sobic003G221500 Sobic005G036200--Sobic007G192200 Sobic002G420400 Sobic002G420400 Sobic005G036200--Sobic002G420400 Sobic009G002200 Sobic009G002200 Sobic005G036200--Sobic009G002200 Sobic001G375800 Sobic001G375800 Sobic005G036200--Sobic001G375800 Sobic010G054800 Sobic010G054800 Sobic005G036200--Sobic010G054800 Sobic001G456400 Sobic001G456400 Sobic005G036200--Sobic001G456400 Sobic009G250500 Sobic009G250500 Sobic005G036200--Sobic009G250500 Sobic004G242200 Sobic004G242200 Sobic005G036200--Sobic004G242200 Sobic010G131500 Sobic010G131500 Sobic005G036200--Sobic010G131500 Sobic002G367200 Sobic002G367200 Sobic003G122800--Sobic002G367200 Sobic008G162100 Sobic008G162100 Sobic003G122800--Sobic008G162100 Sobic009G028100 Sobic009G028100 Sobic003G122800--Sobic009G028100 Sobic003G129300 Sobic003G129300 Sobic003G122800--Sobic003G129300 Sobic002G095300 Sobic002G095300 Sobic003G122800--Sobic002G095300 Sobic003G326500 Sobic003G326500 Sobic003G122800--Sobic003G326500 Sobic003G102700 Sobic003G102700 Sobic003G122800--Sobic003G102700 Sobic003G119900 Sobic003G119900 Sobic003G122800--Sobic003G119900 Sobic007G082000 Sobic007G082000 Sobic003G122800--Sobic007G082000 Sobic007G192200--Sobic005G036200 Sobic006G135800 Sobic006G135800 Sobic007G192200--Sobic006G135800 Sobic007G192200--Sobic003G140800 Sobic007G192200--Sobic009G002200 Sobic007G192200--Sobic006G226000 Sobic009G012600 Sobic009G012600 Sobic007G192200--Sobic009G012600 Sobic007G192200--Sobic004G242200 Sobic005G102800 Sobic005G102800 Sobic007G192200--Sobic005G102800 Sobic009G031800 Sobic009G031800 Sobic007G192200--Sobic009G031800 Sobic005G045700 Sobic005G045700 Sobic006G262501--Sobic005G045700 Sobic002G127900 Sobic002G127900 Sobic006G262501--Sobic002G127900 Sobic006G262501--Sobic005G036200 Sobic008G118100 Sobic008G118100 Sobic006G262501--Sobic008G118100 Sobic003G368901 Sobic003G368901 Sobic006G262501--Sobic003G368901 Sobic006G262501--Sobic009G012600 Sobic007G050800 Sobic007G050800 Sobic006G262501--Sobic007G050800 Sobic005G139300 Sobic005G139300 Sobic006G262501--Sobic005G139300 Sobic010G175000 Sobic010G175000 Sobic006G262501--Sobic010G175000 Sobic001G537400 Sobic001G537400 Sobic009G177200--Sobic001G537400 Sobic009G002900 Sobic009G002900 Sobic009G177200--Sobic009G002900 Sobic001G199500 Sobic001G199500 Sobic009G177200--Sobic001G199500 Sobic001G395200 Sobic001G395200 Sobic009G177200--Sobic001G395200 Sobic008G113300 Sobic008G113300 Sobic009G177200--Sobic008G113300 Sobic008G045000 Sobic008G045000 Sobic009G177200--Sobic008G045000 Sobic003G223000 Sobic003G223000 Sobic009G177200--Sobic003G223000 Sobic006G140400 Sobic006G140400 Sobic009G177200--Sobic006G140400 Sobic001G425700 Sobic001G425700 Sobic009G177200--Sobic001G425700 Sobic009G105400 Sobic009G105400 Sobic001G039300--Sobic009G105400 Sobic004G031300 Sobic004G031300 Sobic001G039300--Sobic004G031300 Sobic005G120700 Sobic005G120700 Sobic001G039300--Sobic005G120700 Sobic001G024000 Sobic001G024000 Sobic001G039300--Sobic001G024000 Sobic006G059500 Sobic006G059500 Sobic001G039300--Sobic006G059500 Sobic001G039300--Sobic006G140400 Sobic010G269300 Sobic010G269300 Sobic001G039300--Sobic010G269300 Sobic010G172400 Sobic010G172400 Sobic001G039300--Sobic010G172400 Sobic001G039300--Sobic009G032200 Sobic002G253900 Sobic002G253900 Sobic001G005800--Sobic002G253900 Sobic008G045800 Sobic008G045800 Sobic001G005800--Sobic008G045800 Sobic002G056000 Sobic002G056000 Sobic001G005800--Sobic002G056000 Sobic002G335500 Sobic002G335500 Sobic001G005800--Sobic002G335500 Sobic009G148000 Sobic009G148000 Sobic001G005800--Sobic009G148000 Sobic006G200901 Sobic006G200901 Sobic001G005800--Sobic006G200901 Sobic006G106200 Sobic006G106200 Sobic001G005800--Sobic006G106200 Sobic004G014100 Sobic004G014100 Sobic001G005800--Sobic004G014100 Sobic002G343000 Sobic002G343000 Sobic001G005800--Sobic002G343000
Octagon: transcription factors


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