Gene annotation
Transcriptome id Sobic.004G148900.2,Sobic.004G148900.1
Synonym Sb04g019750
Functional annotation ankyrin, putative, expressed
UniProt C5XRW3
Pfam PF07719 PF13414 PF12796
Panther DB PTHR22904 PTHR22904:SF337
NCBI CDD KOG0502; Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) KOG0512Fetal globin-inducing factor (contains ankyrin repeats) KOG0508Ankyrin repeat protein KOG441226S proteasome regulatory complex, subunit PSMD10
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G04710 : ankyrin repeat family protein
RAP-DB (Rice) LOC_Os02g29140.1 : ankyrin, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU3Hr1G099440.13 , HORVU3Hr1G099440.12 , HORVU3Hr1G099440.11 , HORVU3Hr1G099440.10 , HORVU3Hr1G099440.16 , HORVU3Hr1G099440.15 , HORVU3Hr1G099440.14 , HORVU2Hr1G094410.14 , HORVU2Hr1G094410.15 , HORVU2Hr1G094410.16 , HORVU2Hr1G094410.17 , HORVU2Hr1G094410.10 , HORVU2Hr1G094410.11 , HORVU2Hr1G094410.12 , HORVU2Hr1G094410.13 , HORVU2Hr1G094410.6 , HORVU2Hr1G094410.7 , HORVU2Hr1G094410.4 , HORVU2Hr1G094410.5 , HORVU2Hr1G094410.2 , HORVU2Hr1G094410.3 , HORVU2Hr1G094410.1 , HORVU2Hr1G094410.8 , HORVU2Hr1G094410.9 , HORVU2Hr1G094410.18 , HORVU3Hr1G099440.3 , HORVU3Hr1G099440.2 , HORVU3Hr1G099440.7 , HORVU3Hr1G099440.6 , HORVU3Hr1G099440.5 , HORVU3Hr1G099440.4 , HORVU3Hr1G099440.9 , HORVU3Hr1G099440.8
Wheat TraesCS4D02G144500 , TraesCS2B02G416000 , TraesCS5D02G532800 , TraesCS3D02G460200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G217500 B3 DNA binding domain containing protein, expressed -
2 Sobic.006G281900 down-regulated TF in developmental senescence(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
3 Sobic.005G036200 protein of unknown function containing protein, expressed -
4 Sobic.010G257000 two-component response regulator, putative, expressed -
5 Sobic.007G199800 BTB/POZ domain containing protein, expressed K10523: speckle-type POZ protein
6 Sobic.007G192200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@LTPL80 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
7 Sobic.010G013500 growth-regulating factor, putative, expressed -
8 Sobic.001G456400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@protein of unknown function DUF1675 domain containing protein, expressed -
9 Sobic.004G242200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nucleobase-ascorbate transporter, putative, expressed -
10 Sobic.009G216500 expressed protein -
11 Sobic.003G084200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.001G264201 - -
13 Sobic.006G262501 - -
14 Sobic.002G367200 RNA-binding protein-like, putative, expressed -
15 Sobic.008G118100 kelch repeat protein, putative, expressed -
16 Sobic.001G005800 - K10885: XRCC5, KU80, ATP-dependent DNA helicase 2 subunit 2
17 Sobic.006G022400 F-box/RNI-like/FBD-like domains-containing protein("PubMedID : 26759170,PubMedID : 24597475")@OsFBD9 - F-box and FBD domain containing protein, expressed -
18 Sobic.002G168000 expressed protein -
19 Sobic.006G088820 - -
20 Sobic.009G002200 formin-like protein 1 precursor, putative, expressed -


Gene co-expression network
sample Sobic004G148900 Sobic004G148900 Sobic006G217500 Sobic006G217500 Sobic004G148900--Sobic006G217500 Sobic006G281900 Sobic006G281900 Sobic004G148900--Sobic006G281900 Sobic005G036200 Sobic005G036200 Sobic004G148900--Sobic005G036200 Sobic010G257000 Sobic010G257000 Sobic004G148900--Sobic010G257000 Sobic007G199800 Sobic007G199800 Sobic004G148900--Sobic007G199800 Sobic007G192200 Sobic007G192200 Sobic004G148900--Sobic007G192200 Sobic010G013500 Sobic010G013500 Sobic004G148900--Sobic010G013500 Sobic001G456400 Sobic001G456400 Sobic004G148900--Sobic001G456400 Sobic004G242200 Sobic004G242200 Sobic004G148900--Sobic004G242200 Sobic006G217500--Sobic004G148900 Sobic006G217500--Sobic001G456400 Sobic002G335500 Sobic002G335500 Sobic006G217500--Sobic002G335500 Sobic003G084200 Sobic003G084200 Sobic006G217500--Sobic003G084200 Sobic001G005800 Sobic001G005800 Sobic006G217500--Sobic001G005800 Sobic001G468000 Sobic001G468000 Sobic006G217500--Sobic001G468000 Sobic003G244000 Sobic003G244000 Sobic006G217500--Sobic003G244000 Sobic002G196500 Sobic002G196500 Sobic006G217500--Sobic002G196500 Sobic009G002200 Sobic009G002200 Sobic006G217500--Sobic009G002200 Sobic002G168000 Sobic002G168000 Sobic006G281900--Sobic002G168000 Sobic002G021200 Sobic002G021200 Sobic006G281900--Sobic002G021200 Sobic009G188900 Sobic009G188900 Sobic006G281900--Sobic009G188900 Sobic001G290500 Sobic001G290500 Sobic006G281900--Sobic001G290500 Sobic001G199500 Sobic001G199500 Sobic006G281900--Sobic001G199500 Sobic001G425700 Sobic001G425700 Sobic006G281900--Sobic001G425700 Sobic009G225500 Sobic009G225500 Sobic006G281900--Sobic009G225500 Sobic007G187700 Sobic007G187700 Sobic006G281900--Sobic007G187700 Sobic003G024000 Sobic003G024000 Sobic006G281900--Sobic003G024000 Sobic005G036200--Sobic007G192200 Sobic002G420400 Sobic002G420400 Sobic005G036200--Sobic002G420400 Sobic005G036200--Sobic009G002200 Sobic001G375800 Sobic001G375800 Sobic005G036200--Sobic001G375800 Sobic010G054800 Sobic010G054800 Sobic005G036200--Sobic010G054800 Sobic005G036200--Sobic001G456400 Sobic009G250500 Sobic009G250500 Sobic005G036200--Sobic009G250500 Sobic005G036200--Sobic004G242200 Sobic010G131500 Sobic010G131500 Sobic005G036200--Sobic010G131500 Sobic010G257000--Sobic009G188900 Sobic010G175000 Sobic010G175000 Sobic010G257000--Sobic010G175000 Sobic010G257000--Sobic002G168000 Sobic009G224300 Sobic009G224300 Sobic010G257000--Sobic009G224300 Sobic001G027500 Sobic001G027500 Sobic010G257000--Sobic001G027500 Sobic008G048966 Sobic008G048966 Sobic010G257000--Sobic008G048966 Sobic010G257000--Sobic006G281900 Sobic010G250400 Sobic010G250400 Sobic010G257000--Sobic010G250400 Sobic006G016700 Sobic006G016700 Sobic010G257000--Sobic006G016700 Sobic009G060600 Sobic009G060600 Sobic007G199800--Sobic009G060600 Sobic007G050800 Sobic007G050800 Sobic007G199800--Sobic007G050800 Sobic003G236150 Sobic003G236150 Sobic007G199800--Sobic003G236150 Sobic007G199800--Sobic005G036200 Sobic002G367200 Sobic002G367200 Sobic007G199800--Sobic002G367200 Sobic002G055800 Sobic002G055800 Sobic007G199800--Sobic002G055800 Sobic007G199800--Sobic007G192200 Sobic007G199800--Sobic009G002200 Sobic009G012600 Sobic009G012600 Sobic007G199800--Sobic009G012600 Sobic007G192200--Sobic005G036200 Sobic006G135800 Sobic006G135800 Sobic007G192200--Sobic006G135800 Sobic003G140800 Sobic003G140800 Sobic007G192200--Sobic003G140800 Sobic007G192200--Sobic009G002200 Sobic006G226000 Sobic006G226000 Sobic007G192200--Sobic006G226000 Sobic007G192200--Sobic009G012600 Sobic007G192200--Sobic004G242200 Sobic005G102800 Sobic005G102800 Sobic007G192200--Sobic005G102800 Sobic009G031800 Sobic009G031800 Sobic007G192200--Sobic009G031800 Sobic009G000600 Sobic009G000600 Sobic010G013500--Sobic009G000600 Sobic004G199200 Sobic004G199200 Sobic010G013500--Sobic004G199200 Sobic006G022400 Sobic006G022400 Sobic010G013500--Sobic006G022400 Sobic002G223300 Sobic002G223300 Sobic010G013500--Sobic002G223300 Sobic002G284400 Sobic002G284400 Sobic010G013500--Sobic002G284400 Sobic010G013500--Sobic001G290500 Sobic001G372900 Sobic001G372900 Sobic010G013500--Sobic001G372900 Sobic010G013500--Sobic006G281900 Sobic005G120600 Sobic005G120600 Sobic010G013500--Sobic005G120600 Sobic001G456400--Sobic004G242200 Sobic001G456400--Sobic005G036200 Sobic001G456400--Sobic001G375800 Sobic001G456400--Sobic009G002200 Sobic001G456400--Sobic002G420400 Sobic010G152000 Sobic010G152000 Sobic001G456400--Sobic010G152000 Sobic001G456400--Sobic003G084200 Sobic009G233000 Sobic009G233000 Sobic001G456400--Sobic009G233000 Sobic003G379900 Sobic003G379900 Sobic001G456400--Sobic003G379900 Sobic004G242200--Sobic002G420400 Sobic004G242200--Sobic001G456400 Sobic004G242200--Sobic005G036200 Sobic004G242200--Sobic009G002200 Sobic004G242200--Sobic001G375800 Sobic004G242200--Sobic007G192200 Sobic004G339900 Sobic004G339900 Sobic004G242200--Sobic004G339900 Sobic004G242200--Sobic010G152000 Sobic004G071050 Sobic004G071050 Sobic004G242200--Sobic004G071050
Octagon: transcription factors


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