Gene annotation
Transcriptome id Sobic.004G258600.1
Synonym DSPTP1E, Sb04g029700, IBR5
Functional annotation dual specificity protein phosphatase, putative, expressed
UniProt C5XZU5
Pfam PF00782
Panther DB PTHR10159 PTHR10159:SF331
NCBI CDD KOG1716; Dual specificity phosphatase
KEGG Orthology K04459; DUSP, dual specificity MAP kinase phosphatase
Gene Ontology GO:0008138; protein tyrosine/serine/threonine phosphatase activity GO:0006470protein dephosphorylation


Orthologs (automatic annotation)
TAIR AT2G04550 : indole-3-butyric acid response 5
RAP-DB (Rice) LOC_Os02g48840.1 : dual specificity protein phosphatase, putative, expressed
MaizeGDB (Corn) Zm00025a021834
Brachypodium KQK18488
Barley HORVU7Hr1G045710.6 , HORVU7Hr1G045710.7 , HORVU7Hr1G045710.4 , HORVU7Hr1G045710.5 , HORVU7Hr1G045710.2 , HORVU7Hr1G045710.3 , HORVU7Hr1G045710.1 , HORVU7Hr1G045710.8
Wheat TraesCS7A02G223000
Populus PNT05197 , PNT05198


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cDNA sequences
Sobic.004G258600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G306600 proteasome subunit, putative, expressed K12180: COPS7, COP9 signalosome complex subunit 7
2 Sobic.001G157600 WD domain, G-beta repeat domain containing protein, expressed K10752: RBBP4, HAT2, CAF1, histone-binding protein RBBP4
3 Sobic.002G403200 ankyrin repeat domain containing protein, putative, expressed -
4 Sobic.002G335500 OsFBX255 - F-box domain containing protein, expressed -
5 Sobic.004G272900 expressed protein -
6 Sobic.006G245700 COP9 signalosome complex subunit 5b, putative, expressed K09613: COPS5, COP9 signalosome complex subunit 5
7 Sobic.002G354800 zinc finger family protein, putative, expressed -
8 Sobic.002G315100 expressed protein K15083: DNA repair protein RAD16
9 Sobic.001G462600 retinoblastoma-binding protein-like, putative, expressed K14961: RBBP5, SWD1, COMPASS component SWD1
10 Sobic.002G267400 POLD4A - Putative DNA polymerase delta complex subunit, expressed K03505: DNA polymerase delta subunit 4
11 Sobic.003G128300 NEDD8-activating enzyme E1 catalytic subunit, putative, expressed K10686: UBE1C, ubiquitin-activating enzyme E1 C
12 Sobic.003G221500 CENP-C1, putative, expressed -
13 Sobic.003G004600 expressed protein -
14 Sobic.004G320100 expressed protein -
15 Sobic.010G154000 zinc finger protein, putative, expressed K11979: E3 ubiquitin-protein ligase UBR7
16 Sobic.002G374200 DNA-directed RNA polymerase II subunit RPB9, putative, expressed K03017: RPB9, DNA-directed RNA polymerase II subunit RPB9
17 Sobic.004G256300 RNA polymerase Rpb4, putative, expressed K03012: RPB4, DNA-directed RNA polymerase II subunit RPB4
18 Sobic.007G153700 transcription regulator, putative, expressed -
19 Sobic.004G318400 MTD1, putative, expressed -
20 Sobic.003G217500 expressed protein -


Gene co-expression network
sample Sobic004G258600 Sobic004G258600 Sobic002G306600 Sobic002G306600 Sobic004G258600--Sobic002G306600 Sobic001G157600 Sobic001G157600 Sobic004G258600--Sobic001G157600 Sobic002G403200 Sobic002G403200 Sobic004G258600--Sobic002G403200 Sobic002G335500 Sobic002G335500 Sobic004G258600--Sobic002G335500 Sobic004G272900 Sobic004G272900 Sobic004G258600--Sobic004G272900 Sobic006G245700 Sobic006G245700 Sobic004G258600--Sobic006G245700 Sobic002G354800 Sobic002G354800 Sobic004G258600--Sobic002G354800 Sobic002G315100 Sobic002G315100 Sobic004G258600--Sobic002G315100 Sobic001G462600 Sobic001G462600 Sobic004G258600--Sobic001G462600 Sobic003G004600 Sobic003G004600 Sobic002G306600--Sobic003G004600 Sobic010G059700 Sobic010G059700 Sobic002G306600--Sobic010G059700 Sobic001G458200 Sobic001G458200 Sobic002G306600--Sobic001G458200 Sobic003G128300 Sobic003G128300 Sobic002G306600--Sobic003G128300 Sobic002G306600--Sobic001G157600 Sobic003G221500 Sobic003G221500 Sobic002G306600--Sobic003G221500 Sobic002G267400 Sobic002G267400 Sobic002G306600--Sobic002G267400 Sobic001G487100 Sobic001G487100 Sobic002G306600--Sobic001G487100 Sobic004G088700 Sobic004G088700 Sobic002G306600--Sobic004G088700 Sobic010G256200 Sobic010G256200 Sobic001G157600--Sobic010G256200 Sobic001G157600--Sobic006G245700 Sobic006G127500 Sobic006G127500 Sobic001G157600--Sobic006G127500 Sobic004G145300 Sobic004G145300 Sobic001G157600--Sobic004G145300 Sobic001G436300 Sobic001G436300 Sobic001G157600--Sobic001G436300 Sobic001G115500 Sobic001G115500 Sobic001G157600--Sobic001G115500 Sobic010G154000 Sobic010G154000 Sobic001G157600--Sobic010G154000 Sobic001G157600--Sobic002G306600 Sobic009G002000 Sobic009G002000 Sobic001G157600--Sobic009G002000 Sobic003G192000 Sobic003G192000 Sobic002G403200--Sobic003G192000 Sobic010G207400 Sobic010G207400 Sobic002G403200--Sobic010G207400 Sobic002G359900 Sobic002G359900 Sobic002G403200--Sobic002G359900 Sobic002G403200--Sobic004G272900 Sobic001G033400 Sobic001G033400 Sobic002G403200--Sobic001G033400 Sobic008G160500 Sobic008G160500 Sobic002G403200--Sobic008G160500 Sobic004G196800 Sobic004G196800 Sobic002G403200--Sobic004G196800 Sobic009G030400 Sobic009G030400 Sobic002G403200--Sobic009G030400 Sobic005G032400 Sobic005G032400 Sobic002G403200--Sobic005G032400 Sobic004G078500 Sobic004G078500 Sobic002G335500--Sobic004G078500 Sobic001G081800 Sobic001G081800 Sobic002G335500--Sobic001G081800 Sobic002G196500 Sobic002G196500 Sobic002G335500--Sobic002G196500 Sobic001G005800 Sobic001G005800 Sobic002G335500--Sobic001G005800 Sobic009G002200 Sobic009G002200 Sobic002G335500--Sobic009G002200 Sobic003G259300 Sobic003G259300 Sobic002G335500--Sobic003G259300 Sobic002G006100 Sobic002G006100 Sobic002G335500--Sobic002G006100 Sobic002G335500--Sobic004G145300 Sobic001G465500 Sobic001G465500 Sobic002G335500--Sobic001G465500 Sobic004G272900--Sobic002G403200 Sobic008G115600 Sobic008G115600 Sobic004G272900--Sobic008G115600 Sobic003G415100 Sobic003G415100 Sobic004G272900--Sobic003G415100 Sobic004G272900--Sobic010G256200 Sobic004G272900--Sobic001G157600 Sobic002G014700 Sobic002G014700 Sobic004G272900--Sobic002G014700 Sobic004G272900--Sobic002G306600 Sobic003G140900 Sobic003G140900 Sobic004G272900--Sobic003G140900 Sobic006G261100 Sobic006G261100 Sobic004G272900--Sobic006G261100 Sobic004G256300 Sobic004G256300 Sobic006G245700--Sobic004G256300 Sobic001G370300 Sobic001G370300 Sobic006G245700--Sobic001G370300 Sobic008G125000 Sobic008G125000 Sobic006G245700--Sobic008G125000 Sobic003G274400 Sobic003G274400 Sobic006G245700--Sobic003G274400 Sobic006G245700--Sobic001G115500 Sobic002G394800 Sobic002G394800 Sobic006G245700--Sobic002G394800 Sobic006G245700--Sobic001G436300 Sobic006G245700--Sobic003G221500 Sobic006G245700--Sobic001G157600 Sobic002G230400 Sobic002G230400 Sobic002G354800--Sobic002G230400 Sobic002G354800--Sobic002G315100 Sobic006G184200 Sobic006G184200 Sobic002G354800--Sobic006G184200 Sobic002G349000 Sobic002G349000 Sobic002G354800--Sobic002G349000 Sobic002G354800--Sobic001G081800 Sobic004G014100 Sobic004G014100 Sobic002G354800--Sobic004G014100 Sobic006G143300 Sobic006G143300 Sobic002G354800--Sobic006G143300 Sobic003G055200 Sobic003G055200 Sobic002G354800--Sobic003G055200 Sobic001G278700 Sobic001G278700 Sobic002G354800--Sobic001G278700 Sobic002G315100--Sobic002G354800 Sobic006G091850 Sobic006G091850 Sobic002G315100--Sobic006G091850 Sobic005G160200 Sobic005G160200 Sobic002G315100--Sobic005G160200 Sobic002G315100--Sobic003G055200 Sobic002G315100--Sobic002G230400 Sobic002G315100--Sobic004G014100 Sobic002G315100--Sobic006G143300 Sobic009G069200 Sobic009G069200 Sobic002G315100--Sobic009G069200 Sobic002G315100--Sobic006G184200 Sobic001G462600--Sobic003G221500 Sobic006G188500 Sobic006G188500 Sobic001G462600--Sobic006G188500 Sobic002G142700 Sobic002G142700 Sobic001G462600--Sobic002G142700 Sobic001G462600--Sobic004G256300 Sobic001G462600--Sobic003G128300 Sobic004G177600 Sobic004G177600 Sobic001G462600--Sobic004G177600 Sobic003G222700 Sobic003G222700 Sobic001G462600--Sobic003G222700 Sobic006G212900 Sobic006G212900 Sobic001G462600--Sobic006G212900 Sobic004G315500 Sobic004G315500 Sobic001G462600--Sobic004G315500
Octagon: transcription factors


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