Gene annotation
Transcriptome id Sobic.005G044100.1
Synonym Sb05g003640
Functional annotation harpin-induced protein 1 domain containing protein, expressed
UniProt A0A1Z5RGM1
Pfam -
Panther DB PTHR31852 PTHR31852:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G35980 : Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
RAP-DB (Rice) LOC_Os11g05870.1 : harpin-induced protein 1 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a012953 , Zm00025a033681
Brachypodium KQJ89364
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G187600 methyltransferase domain containing protein, expressed -
2 Sobic.003G410200 ubiquitin-conjugating enzyme E2-22 kDa, putative, expressed K04649: HIP2, ubiquitin-conjugating enzyme (huntingtin interacting protein 2)
3 Sobic.001G478700 THION26 - Plant thionin family protein precursor, expressed -
4 Sobic.001G434400 ufm1-conjugating enzyme 1, putative, expressed K12165: ufm1-conjugating enzyme 1
5 Sobic.002G280900 la domain containing protein, putative, expressed K18757: la-related protein 1
6 Sobic.006G094500 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
7 Sobic.006G131900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ethylene-responsive protein related, putative, expressed -
8 Sobic.007G224300 RING finger protein, putative, expressed -
9 Sobic.005G084900 OsDegp12 - Putative Deg protease homologue, expressed -
10 Sobic.003G374850 - K12831: SF3B4, splicing factor 3B subunit 4
11 Sobic.002G400400 choline transporter-related, putative, expressed -
12 Sobic.003G348200 Lung seven transmembrane receptor domain containing protein, putative, expressed -
13 Sobic.006G164000 expressed protein -
14 Sobic.010G079800 expressed protein -
15 Sobic.001G382400 TKL_IRAK_CrRLK1L-1.5 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
16 Sobic.002G113500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@RALFL4 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
17 Sobic.004G331900 transmembrane 9 superfamily member, putative, expressed -
18 Sobic.009G232500 expressed protein -
19 Sobic.007G140500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@CAF1 family ribonuclease containing protein, putative, expressed K12581: CNOT7_8, CAF1, CCR4-NOT transcription complex subunit 7/8
20 Sobic.004G137900 wiskott-Aldrich syndrome protein family member 2, putative, expressed -


Gene co-expression network
sample Sobic005G044100 Sobic005G044100 Sobic009G187600 Sobic009G187600 Sobic005G044100--Sobic009G187600 Sobic003G410200 Sobic003G410200 Sobic005G044100--Sobic003G410200 Sobic001G478700 Sobic001G478700 Sobic005G044100--Sobic001G478700 Sobic001G434400 Sobic001G434400 Sobic005G044100--Sobic001G434400 Sobic002G280900 Sobic002G280900 Sobic005G044100--Sobic002G280900 Sobic006G094500 Sobic006G094500 Sobic005G044100--Sobic006G094500 Sobic006G131900 Sobic006G131900 Sobic005G044100--Sobic006G131900 Sobic007G224300 Sobic007G224300 Sobic005G044100--Sobic007G224300 Sobic005G084900 Sobic005G084900 Sobic005G044100--Sobic005G084900 Sobic009G187600--Sobic006G094500 Sobic003G348200 Sobic003G348200 Sobic009G187600--Sobic003G348200 Sobic010G185100 Sobic010G185100 Sobic009G187600--Sobic010G185100 Sobic009G218000 Sobic009G218000 Sobic009G187600--Sobic009G218000 Sobic007G010200 Sobic007G010200 Sobic009G187600--Sobic007G010200 Sobic001G188700 Sobic001G188700 Sobic009G187600--Sobic001G188700 Sobic002G422400 Sobic002G422400 Sobic009G187600--Sobic002G422400 Sobic007G031100 Sobic007G031100 Sobic009G187600--Sobic007G031100 Sobic009G187600--Sobic005G044100 Sobic009G232500 Sobic009G232500 Sobic003G410200--Sobic009G232500 Sobic003G435000 Sobic003G435000 Sobic003G410200--Sobic003G435000 Sobic009G131500 Sobic009G131500 Sobic003G410200--Sobic009G131500 Sobic003G410200--Sobic007G031100 Sobic004G012800 Sobic004G012800 Sobic003G410200--Sobic004G012800 Sobic002G374200 Sobic002G374200 Sobic003G410200--Sobic002G374200 Sobic003G410200--Sobic007G010200 Sobic002G306600 Sobic002G306600 Sobic003G410200--Sobic002G306600 Sobic006G091850 Sobic006G091850 Sobic003G410200--Sobic006G091850 Sobic001G353501 Sobic001G353501 Sobic001G478700--Sobic001G353501 Sobic001G478700--Sobic009G232500 Sobic001G478700--Sobic003G410200 Sobic010G079800 Sobic010G079800 Sobic001G478700--Sobic010G079800 Sobic006G004300 Sobic006G004300 Sobic001G478700--Sobic006G004300 Sobic001G478700--Sobic005G044100 Sobic001G478700--Sobic007G031100 Sobic007G140500 Sobic007G140500 Sobic001G478700--Sobic007G140500 Sobic010G067200 Sobic010G067200 Sobic001G478700--Sobic010G067200 Sobic006G276200 Sobic006G276200 Sobic001G434400--Sobic006G276200 Sobic010G088300 Sobic010G088300 Sobic001G434400--Sobic010G088300 Sobic001G434400--Sobic004G012800 Sobic006G231500 Sobic006G231500 Sobic001G434400--Sobic006G231500 Sobic004G242100 Sobic004G242100 Sobic001G434400--Sobic004G242100 Sobic004G137900 Sobic004G137900 Sobic001G434400--Sobic004G137900 Sobic006G109700 Sobic006G109700 Sobic001G434400--Sobic006G109700 Sobic001G130400 Sobic001G130400 Sobic001G434400--Sobic001G130400 Sobic005G110526 Sobic005G110526 Sobic001G434400--Sobic005G110526 Sobic010G059700 Sobic010G059700 Sobic002G280900--Sobic010G059700 Sobic001G506000 Sobic001G506000 Sobic002G280900--Sobic001G506000 Sobic002G280900--Sobic007G031100 Sobic001G432100 Sobic001G432100 Sobic002G280900--Sobic001G432100 Sobic004G151200 Sobic004G151200 Sobic002G280900--Sobic004G151200 Sobic002G280900--Sobic005G084900 Sobic009G002000 Sobic009G002000 Sobic002G280900--Sobic009G002000 Sobic001G302900 Sobic001G302900 Sobic002G280900--Sobic001G302900 Sobic007G140600 Sobic007G140600 Sobic002G280900--Sobic007G140600 Sobic006G094500--Sobic009G187600 Sobic006G094500--Sobic007G224300 Sobic006G094500--Sobic001G188700 Sobic001G451901 Sobic001G451901 Sobic006G094500--Sobic001G451901 Sobic006G094500--Sobic001G434400 Sobic006G094500--Sobic002G422400 Sobic004G018200 Sobic004G018200 Sobic006G094500--Sobic004G018200 Sobic006G094500--Sobic002G280900 Sobic006G094500--Sobic007G031100 Sobic004G210000 Sobic004G210000 Sobic006G131900--Sobic004G210000 Sobic004G155300 Sobic004G155300 Sobic006G131900--Sobic004G155300 Sobic006G131900--Sobic007G140500 Sobic006G131900--Sobic005G044100 Sobic003G119900 Sobic003G119900 Sobic006G131900--Sobic003G119900 Sobic003G358200 Sobic003G358200 Sobic006G131900--Sobic003G358200 Sobic010G273800 Sobic010G273800 Sobic006G131900--Sobic010G273800 Sobic006G131900--Sobic005G084900 Sobic010G093400 Sobic010G093400 Sobic006G131900--Sobic010G093400 Sobic007G224300--Sobic006G094500 Sobic007G139900 Sobic007G139900 Sobic007G224300--Sobic007G139900 Sobic008G051400 Sobic008G051400 Sobic007G224300--Sobic008G051400 Sobic002G138700 Sobic002G138700 Sobic007G224300--Sobic002G138700 Sobic007G224300--Sobic009G187600 Sobic009G171100 Sobic009G171100 Sobic007G224300--Sobic009G171100 Sobic007G224300--Sobic004G018200 Sobic010G178800 Sobic010G178800 Sobic007G224300--Sobic010G178800 Sobic001G525400 Sobic001G525400 Sobic007G224300--Sobic001G525400 Sobic005G084900--Sobic009G002000 Sobic009G030400 Sobic009G030400 Sobic005G084900--Sobic009G030400 Sobic006G164000 Sobic006G164000 Sobic005G084900--Sobic006G164000 Sobic005G084900--Sobic002G280900 Sobic001G067000 Sobic001G067000 Sobic005G084900--Sobic001G067000 Sobic001G294600 Sobic001G294600 Sobic005G084900--Sobic001G294600 Sobic005G084900--Sobic010G059700 Sobic004G145600 Sobic004G145600 Sobic005G084900--Sobic004G145600 Sobic010G141600 Sobic010G141600 Sobic005G084900--Sobic010G141600
Octagon: transcription factors


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