Gene annotation
Transcriptome id Sobic.006G164000.1
Synonym Sb06g024010
Functional annotation expressed protein
UniProt C5YD15 , O49233
Pfam -
Panther DB PTHR33709 PTHR33709:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G78880 : Ubiquitin-specific protease family C19-related protein
RAP-DB (Rice) LOC_Os04g45821.1 : expressed protein
MaizeGDB (Corn) Zm00025a056628
Brachypodium KQJ83858
Barley HORVU2Hr1G092730.8 , HORVU2Hr1G092730.2 , HORVU2Hr1G092730.1 , HORVU2Hr1G092730.3 , HORVU2Hr1G092730.5 , HORVU2Hr1G092730.4 , HORVU2Hr1G092730.7 , HORVU2Hr1G092730.6
Wheat TraesCS2A02G389500 , TraesCS2B02G407700 , TraesCS2D02G387400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G358200 reticulon domain containing protein, putative, expressed -
2 Sobic.004G155300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.005G084900 OsDegp12 - Putative Deg protease homologue, expressed -
4 Sobic.001G419700 DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8
5 Sobic.002G420800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@stress responsive protein, putative, expressed -
6 Sobic.003G159500 zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.004G345100 expressed protein -
8 Sobic.002G400400 choline transporter-related, putative, expressed -
9 Sobic.001G170500 expressed protein -
10 Sobic.010G227400 glycosyl hydrolase, family 31, putative, expressed K01187: alpha-glucosidase
11 Sobic.009G025100 transporter, putative, expressed -
12 Sobic.006G066600 DNA-binding protein S1FA, putative, expressed -
13 Sobic.001G379000 aminotransferase, putative, expressed K00827: alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase
14 Sobic.003G153500 GDSL-like lipase/acylhydrolase, putative, expressed -
15 Sobic.007G152500 cytochrome P450, putative, expressed -
16 Sobic.005G198700 - -
17 Sobic.010G207400 protein kinase domain containing protein, expressed -
18 Sobic.009G030400 eyes absent homolog 4, putative, expressed -
19 Sobic.001G368900 IQ calmodulin-binding motif family protein, putative, expressed -
20 Sobic.001G206300 dof zinc finger domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic006G164000 Sobic006G164000 Sobic003G358200 Sobic003G358200 Sobic006G164000--Sobic003G358200 Sobic004G155300 Sobic004G155300 Sobic006G164000--Sobic004G155300 Sobic005G084900 Sobic005G084900 Sobic006G164000--Sobic005G084900 Sobic001G419700 Sobic001G419700 Sobic006G164000--Sobic001G419700 Sobic002G420800 Sobic002G420800 Sobic006G164000--Sobic002G420800 Sobic003G159500 Sobic003G159500 Sobic006G164000--Sobic003G159500 Sobic004G345100 Sobic004G345100 Sobic006G164000--Sobic004G345100 Sobic002G400400 Sobic002G400400 Sobic006G164000--Sobic002G400400 Sobic001G170500 Sobic001G170500 Sobic006G164000--Sobic001G170500 Sobic010G093400 Sobic010G093400 Sobic003G358200--Sobic010G093400 Sobic003G358200--Sobic002G420800 Sobic007G152500 Sobic007G152500 Sobic003G358200--Sobic007G152500 Sobic003G358200--Sobic006G164000 Sobic001G067000 Sobic001G067000 Sobic003G358200--Sobic001G067000 Sobic001G379000 Sobic001G379000 Sobic003G358200--Sobic001G379000 Sobic001G294600 Sobic001G294600 Sobic003G358200--Sobic001G294600 Sobic003G358200--Sobic001G419700 Sobic010G207400 Sobic010G207400 Sobic003G358200--Sobic010G207400 Sobic003G304500 Sobic003G304500 Sobic004G155300--Sobic003G304500 Sobic009G025100 Sobic009G025100 Sobic004G155300--Sobic009G025100 Sobic004G028800 Sobic004G028800 Sobic004G155300--Sobic004G028800 Sobic004G318400 Sobic004G318400 Sobic004G155300--Sobic004G318400 Sobic004G274500 Sobic004G274500 Sobic004G155300--Sobic004G274500 Sobic006G244500 Sobic006G244500 Sobic004G155300--Sobic006G244500 Sobic004G155300--Sobic001G170500 Sobic004G196800 Sobic004G196800 Sobic004G155300--Sobic004G196800 Sobic007G018000 Sobic007G018000 Sobic004G155300--Sobic007G018000 Sobic009G002000 Sobic009G002000 Sobic005G084900--Sobic009G002000 Sobic009G030400 Sobic009G030400 Sobic005G084900--Sobic009G030400 Sobic005G084900--Sobic006G164000 Sobic002G280900 Sobic002G280900 Sobic005G084900--Sobic002G280900 Sobic005G084900--Sobic001G067000 Sobic005G084900--Sobic001G294600 Sobic010G059700 Sobic010G059700 Sobic005G084900--Sobic010G059700 Sobic004G145600 Sobic004G145600 Sobic005G084900--Sobic004G145600 Sobic010G141600 Sobic010G141600 Sobic005G084900--Sobic010G141600 Sobic003G402100 Sobic003G402100 Sobic001G419700--Sobic003G402100 Sobic007G128400 Sobic007G128400 Sobic001G419700--Sobic007G128400 Sobic001G419700--Sobic001G170500 Sobic005G198700 Sobic005G198700 Sobic001G419700--Sobic005G198700 Sobic001G419700--Sobic002G420800 Sobic001G068200 Sobic001G068200 Sobic001G419700--Sobic001G068200 Sobic010G227400 Sobic010G227400 Sobic001G419700--Sobic010G227400 Sobic005G102451 Sobic005G102451 Sobic001G419700--Sobic005G102451 Sobic005G056100 Sobic005G056100 Sobic001G419700--Sobic005G056100 Sobic007G040000 Sobic007G040000 Sobic002G420800--Sobic007G040000 Sobic009G090250 Sobic009G090250 Sobic002G420800--Sobic009G090250 Sobic005G173900 Sobic005G173900 Sobic002G420800--Sobic005G173900 Sobic001G246400 Sobic001G246400 Sobic002G420800--Sobic001G246400 Sobic005G174500 Sobic005G174500 Sobic002G420800--Sobic005G174500 Sobic002G420800--Sobic007G128400 Sobic001G270600 Sobic001G270600 Sobic002G420800--Sobic001G270600 Sobic002G267700 Sobic002G267700 Sobic002G420800--Sobic002G267700 Sobic006G117300 Sobic006G117300 Sobic002G420800--Sobic006G117300 Sobic006G179600 Sobic006G179600 Sobic003G159500--Sobic006G179600 Sobic006G061100 Sobic006G061100 Sobic003G159500--Sobic006G061100 Sobic003G159500--Sobic010G207400 Sobic009G132600 Sobic009G132600 Sobic003G159500--Sobic009G132600 Sobic010G071600 Sobic010G071600 Sobic003G159500--Sobic010G071600 Sobic010G273800 Sobic010G273800 Sobic003G159500--Sobic010G273800 Sobic007G042300 Sobic007G042300 Sobic003G159500--Sobic007G042300 Sobic002G403200 Sobic002G403200 Sobic003G159500--Sobic002G403200 Sobic008G160500 Sobic008G160500 Sobic003G159500--Sobic008G160500 Sobic006G072400 Sobic006G072400 Sobic004G345100--Sobic006G072400 Sobic004G345100--Sobic004G028800 Sobic003G004500 Sobic003G004500 Sobic004G345100--Sobic003G004500 Sobic006G261100 Sobic006G261100 Sobic004G345100--Sobic006G261100 Sobic002G359900 Sobic002G359900 Sobic004G345100--Sobic002G359900 Sobic002G252900 Sobic002G252900 Sobic004G345100--Sobic002G252900 Sobic006G120800 Sobic006G120800 Sobic004G345100--Sobic006G120800 Sobic001G458200 Sobic001G458200 Sobic004G345100--Sobic001G458200 Sobic003G415100 Sobic003G415100 Sobic004G345100--Sobic003G415100 Sobic001G033400 Sobic001G033400 Sobic002G400400--Sobic001G033400 Sobic002G103700 Sobic002G103700 Sobic002G400400--Sobic002G103700 Sobic003G436500 Sobic003G436500 Sobic002G400400--Sobic003G436500 Sobic002G400400--Sobic008G160500 Sobic001G310700 Sobic001G310700 Sobic002G400400--Sobic001G310700 Sobic002G400400--Sobic003G159500 Sobic007G050300 Sobic007G050300 Sobic002G400400--Sobic007G050300 Sobic002G400400--Sobic010G207400 Sobic001G039500 Sobic001G039500 Sobic002G400400--Sobic001G039500 Sobic001G170500--Sobic009G025100 Sobic009G007500 Sobic009G007500 Sobic001G170500--Sobic009G007500 Sobic008G088450 Sobic008G088450 Sobic001G170500--Sobic008G088450 Sobic010G118200 Sobic010G118200 Sobic001G170500--Sobic010G118200 Sobic009G253800 Sobic009G253800 Sobic001G170500--Sobic009G253800 Sobic009G227000 Sobic009G227000 Sobic001G170500--Sobic009G227000 Sobic004G294500 Sobic004G294500 Sobic001G170500--Sobic004G294500 Sobic003G024700 Sobic003G024700 Sobic001G170500--Sobic003G024700 Sobic001G518700 Sobic001G518700 Sobic001G170500--Sobic001G518700
Octagon: transcription factors


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