Gene annotation
Transcriptome id Sobic.010G227400.2
Synonym Sb10g027110
Functional annotation glycosyl hydrolase, family 31, putative, expressed
UniProt A0A1W0VUE2
Pfam PF13802 PF16863 PF01055
Panther DB PTHR22762 PTHR22762:SF83
NCBI CDD -
KEGG Orthology K01187; alpha-glucosidase
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT5G11720 : Glycosyl hydrolases family 31 protein
RAP-DB (Rice) LOC_Os06g46284.2 : glycosyl hydrolase, family 31, putative, expressed
MaizeGDB (Corn) Zm00025a041919 , Zm00025a023621
Brachypodium PNT75435 , KQK05295 , KQK17139 , KQK02530 , PNT70863 , PNT70866 , PNT70865 , PNT70864
Barley HORVU2Hr1G120920.8 , HORVU2Hr1G120920.9 , HORVU2Hr1G120920.7 , HORVU2Hr1G120920.4 , HORVU2Hr1G120920.5 , HORVU2Hr1G120920.2 , HORVU2Hr1G120920.3 , HORVU7Hr1G106540.20 , HORVU7Hr1G106540.21 , HORVU7Hr1G106540.22 , HORVU2Hr1G120880.5 , HORVU2Hr1G120880.4 , HORVU2Hr1G120880.6 , HORVU2Hr1G120880.1 , HORVU2Hr1G120880.3 , HORVU2Hr1G120880.2 , HORVU7Hr1G106540.19 , HORVU7Hr1G106540.18 , HORVU7Hr1G106540.15 , HORVU7Hr1G106540.14 , HORVU7Hr1G106540.17 , HORVU7Hr1G106540.16 , HORVU7Hr1G106540.11 , HORVU7Hr1G106540.10 , HORVU7Hr1G106540.13 , HORVU7Hr1G106540.12 , HORVU7Hr1G106540.9 , HORVU7Hr1G106540.8 , HORVU7Hr1G106540.3 , HORVU7Hr1G106540.2 , HORVU7Hr1G106540.5 , HORVU7Hr1G106540.4 , HORVU7Hr1G106540.7 , HORVU7Hr1G106540.6 , HORVU2Hr1G120920.10 , HORVU2Hr1G120920.11
Wheat TraesCS7B02G364700 , TraesCS7B02G364700 , TraesCS2A02G549800 , TraesCS2A02G548700 , TraesCS7D02G451800 , TraesCS7D02G451800 , TraesCS2D02G550700 , TraesCS7A02G464200 , TraesCS7A02G464200 , TraesCS2A02G548900 , TraesCS2B02G580300 , TraesCS2B02G580100 , TraesCS2D02G550400 , TraesCS2D02G550600 , TraesCS2B02G580200 , TraesCS2A02G549600
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.010G227400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G085700 myb-like DNA-binding domain, SHAQKYF class family protein, expressed -
2 Sobic.006G051750 - -
3 Sobic.008G039700 expressed protein -
4 Sobic.004G261000 expressed protein -
5 Sobic.010G200400 AP2 domain containing protein, expressed -
6 Sobic.008G081000 - -
7 Sobic.007G205100 AP2 domain containing protein, expressed -
8 Sobic.004G142000 - -
9 Sobic.005G153200 - -
10 Sobic.001G259250 - -
11 Sobic.001G253400 AP2 domain containing protein, expressed -
12 Sobic.002G338600 expressed protein -
13 Sobic.001G158600 MYB family transcription factor, putative, expressed -
14 Sobic.010G200200 AP2 domain containing protein, expressed -
15 Sobic.001G068200 - -
16 Sobic.002G089400 DEF8 - Defensin and Defensin-like DEFL family, expressed -
17 Sobic.009G116500 esterase, putative, expressed -
18 Sobic.004G099750 - -
19 Sobic.008G081700 - -
20 Sobic.007G034900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic010G227400 Sobic010G227400 Sobic010G085700 Sobic010G085700 Sobic010G227400--Sobic010G085700 Sobic006G051750 Sobic006G051750 Sobic010G227400--Sobic006G051750 Sobic008G039700 Sobic008G039700 Sobic010G227400--Sobic008G039700 Sobic004G261000 Sobic004G261000 Sobic010G227400--Sobic004G261000 Sobic010G200400 Sobic010G200400 Sobic010G227400--Sobic010G200400 Sobic008G081000 Sobic008G081000 Sobic010G227400--Sobic008G081000 Sobic007G205100 Sobic007G205100 Sobic010G227400--Sobic007G205100 Sobic004G142000 Sobic004G142000 Sobic010G227400--Sobic004G142000 Sobic005G153200 Sobic005G153200 Sobic010G227400--Sobic005G153200 Sobic009G040000 Sobic009G040000 Sobic010G085700--Sobic009G040000 Sobic005G173800 Sobic005G173800 Sobic010G085700--Sobic005G173800 Sobic010G085700--Sobic006G051750 Sobic001G253400 Sobic001G253400 Sobic010G085700--Sobic001G253400 Sobic001G158600 Sobic001G158600 Sobic010G085700--Sobic001G158600 Sobic010G085700--Sobic004G261000 Sobic001G068200 Sobic001G068200 Sobic010G085700--Sobic001G068200 Sobic004G099750 Sobic004G099750 Sobic010G085700--Sobic004G099750 Sobic010G085700--Sobic008G081000 Sobic006G051750--Sobic004G261000 Sobic006G051750--Sobic005G153200 Sobic001G259250 Sobic001G259250 Sobic006G051750--Sobic001G259250 Sobic006G051750--Sobic001G158600 Sobic006G051750--Sobic004G142000 Sobic006G051750--Sobic001G253400 Sobic005G193700 Sobic005G193700 Sobic006G051750--Sobic005G193700 Sobic006G051750--Sobic004G099750 Sobic010G200200 Sobic010G200200 Sobic006G051750--Sobic010G200200 Sobic008G039700--Sobic006G051750 Sobic008G039700--Sobic010G085700 Sobic008G039700--Sobic001G068200 Sobic008G039700--Sobic004G261000 Sobic008G039700--Sobic004G099750 Sobic008G039700--Sobic001G158600 Sobic008G039700--Sobic001G253400 Sobic008G039700--Sobic010G200400 Sobic008G039700--Sobic005G153200 Sobic004G261000--Sobic006G051750 Sobic004G261000--Sobic005G153200 Sobic004G261000--Sobic001G259250 Sobic004G261000--Sobic001G158600 Sobic007G034900 Sobic007G034900 Sobic004G261000--Sobic007G034900 Sobic004G261000--Sobic004G142000 Sobic009G116500 Sobic009G116500 Sobic004G261000--Sobic009G116500 Sobic004G261000--Sobic010G200200 Sobic008G081700 Sobic008G081700 Sobic004G261000--Sobic008G081700 Sobic010G200400--Sobic007G205100 Sobic002G089400 Sobic002G089400 Sobic010G200400--Sobic002G089400 Sobic002G338600 Sobic002G338600 Sobic010G200400--Sobic002G338600 Sobic002G028100 Sobic002G028100 Sobic010G200400--Sobic002G028100 Sobic007G025300 Sobic007G025300 Sobic010G200400--Sobic007G025300 Sobic010G200400--Sobic008G081700 Sobic010G200400--Sobic010G200200 Sobic002G367600 Sobic002G367600 Sobic010G200400--Sobic002G367600 Sobic010G200400--Sobic009G116500 Sobic005G056100 Sobic005G056100 Sobic008G081000--Sobic005G056100 Sobic010G109700 Sobic010G109700 Sobic008G081000--Sobic010G109700 Sobic005G102451 Sobic005G102451 Sobic008G081000--Sobic005G102451 Sobic008G081000--Sobic010G200400 Sobic008G081000--Sobic002G089400 Sobic008G088450 Sobic008G088450 Sobic008G081000--Sobic008G088450 Sobic008G081000--Sobic007G025300 Sobic008G081000--Sobic007G205100 Sobic008G081000--Sobic001G068200 Sobic007G205100--Sobic010G200400 Sobic007G205100--Sobic002G338600 Sobic007G205100--Sobic002G089400 Sobic007G205100--Sobic002G028100 Sobic007G205100--Sobic010G200200 Sobic007G205100--Sobic008G081700 Sobic007G205100--Sobic002G367600 Sobic007G205100--Sobic007G025300 Sobic007G205100--Sobic001G259250 Sobic004G142000--Sobic001G259250 Sobic004G142000--Sobic005G153200 Sobic004G142000--Sobic010G200200 Sobic004G142000--Sobic006G051750 Sobic004G142000--Sobic002G338600 Sobic004G142000--Sobic004G261000 Sobic004G142000--Sobic008G081700 Sobic004G142000--Sobic007G205100 Sobic004G142000--Sobic007G034900 Sobic005G153200--Sobic001G259250 Sobic005G153200--Sobic004G142000 Sobic005G153200--Sobic010G200200 Sobic005G153200--Sobic006G051750 Sobic005G153200--Sobic002G338600 Sobic005G153200--Sobic004G261000 Sobic005G153200--Sobic008G081700 Sobic005G153200--Sobic007G205100 Sobic005G153200--Sobic007G034900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.