Gene annotation
Transcriptome id Sobic.004G153000.2,Sobic.004G153000.1
Synonym Sb04g020470
Functional annotation expressed protein
UniProt A0A194YPV1 , A0A194YPV6
Pfam -
Panther DB PTHR35481 PTHR35481:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G38430 : -
RAP-DB (Rice) LOC_Os02g30140.2 : expressed protein
MaizeGDB (Corn) Zm00025a031385
Brachypodium KQJ99555
Barley -
Wheat TraesCS6A02G139200 , TraesCS6B02G167700
Populus -


JBrowse

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cDNA sequences
Sobic.004G153000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G348200 Lung seven transmembrane receptor domain containing protein, putative, expressed -
2 Sobic.007G003100 transmembrane protein 18, putative, expressed -
3 Sobic.003G109200 expressed protein -
4 Sobic.004G358900 Sec1 family transport protein, putative, expressed -
5 Sobic.010G277000 exosome complex exonuclease, putative, expressed K12589: RRP42, exosome complex component RRP42
6 Sobic.003G125100 uncharacterized Cys-rich domain containing protein, putative, expressed -
7 Sobic.001G107300 WD repeat-containing protein 5, putative, expressed K14963: WDR5, SWD3, COMPASS component SWD3
8 Sobic.002G087000 peptidase, T1 family, putative, expressed K02739: 20S proteasome subunit beta 2
9 Sobic.001G205900 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
10 Sobic.001G542900 uncharacterized Cys-rich domain containing protein, putative, expressed -
11 Sobic.003G224300 ribosomal protein L6, putative, expressed K02933: RP-L6, MRPL6, large subunit ribosomal protein L6
12 Sobic.009G182200 domain of unknown function, DUF250 domain containing protein, expressed -
13 Sobic.001G035400 ras-related protein, putative, expressed K07901: RAB8A, Ras-related protein Rab-8A
14 Sobic.001G408100 Yip1 domain containing protein, expressed -
15 Sobic.001G196100 src homology-3 domain protein 3, putative, expressed -
16 Sobic.001G451901 - -
17 Sobic.003G217100 Yip1 domain containing protein, expressed -
18 Sobic.007G203900 methyl-binding domain protein MBD, putative, expressed -
19 Sobic.010G059700 galactosyltransferase family protein, putative, expressed -
20 Sobic.004G033500 expressed protein -


Gene co-expression network
sample Sobic004G153000 Sobic004G153000 Sobic003G348200 Sobic003G348200 Sobic004G153000--Sobic003G348200 Sobic007G003100 Sobic007G003100 Sobic004G153000--Sobic007G003100 Sobic003G109200 Sobic003G109200 Sobic004G153000--Sobic003G109200 Sobic004G358900 Sobic004G358900 Sobic004G153000--Sobic004G358900 Sobic010G277000 Sobic010G277000 Sobic004G153000--Sobic010G277000 Sobic003G125100 Sobic003G125100 Sobic004G153000--Sobic003G125100 Sobic001G107300 Sobic001G107300 Sobic004G153000--Sobic001G107300 Sobic002G087000 Sobic002G087000 Sobic004G153000--Sobic002G087000 Sobic001G205900 Sobic001G205900 Sobic004G153000--Sobic001G205900 Sobic004G331900 Sobic004G331900 Sobic003G348200--Sobic004G331900 Sobic004G184000 Sobic004G184000 Sobic003G348200--Sobic004G184000 Sobic001G196100 Sobic001G196100 Sobic003G348200--Sobic001G196100 Sobic003G348200--Sobic010G277000 Sobic001G542900 Sobic001G542900 Sobic003G348200--Sobic001G542900 Sobic001G116000 Sobic001G116000 Sobic003G348200--Sobic001G116000 Sobic009G187600 Sobic009G187600 Sobic003G348200--Sobic009G187600 Sobic003G424300 Sobic003G424300 Sobic003G348200--Sobic003G424300 Sobic003G348200--Sobic004G358900 Sobic004G039400 Sobic004G039400 Sobic007G003100--Sobic004G039400 Sobic007G048700 Sobic007G048700 Sobic007G003100--Sobic007G048700 Sobic003G167000 Sobic003G167000 Sobic007G003100--Sobic003G167000 Sobic009G112900 Sobic009G112900 Sobic007G003100--Sobic009G112900 Sobic001G443200 Sobic001G443200 Sobic007G003100--Sobic001G443200 Sobic009G206600 Sobic009G206600 Sobic007G003100--Sobic009G206600 Sobic001G060300 Sobic001G060300 Sobic007G003100--Sobic001G060300 Sobic006G203900 Sobic006G203900 Sobic007G003100--Sobic006G203900 Sobic010G040900 Sobic010G040900 Sobic007G003100--Sobic010G040900 Sobic003G109200--Sobic001G107300 Sobic004G208100 Sobic004G208100 Sobic003G109200--Sobic004G208100 Sobic002G387800 Sobic002G387800 Sobic003G109200--Sobic002G387800 Sobic001G521100 Sobic001G521100 Sobic003G109200--Sobic001G521100 Sobic009G169200 Sobic009G169200 Sobic003G109200--Sobic009G169200 Sobic009G232500 Sobic009G232500 Sobic003G109200--Sobic009G232500 Sobic006G095300 Sobic006G095300 Sobic003G109200--Sobic006G095300 Sobic001G432100 Sobic001G432100 Sobic003G109200--Sobic001G432100 Sobic003G297200 Sobic003G297200 Sobic003G109200--Sobic003G297200 Sobic009G120500 Sobic009G120500 Sobic004G358900--Sobic009G120500 Sobic003G005900 Sobic003G005900 Sobic004G358900--Sobic003G005900 Sobic008G125000 Sobic008G125000 Sobic004G358900--Sobic008G125000 Sobic004G358900--Sobic003G348200 Sobic003G062400 Sobic003G062400 Sobic004G358900--Sobic003G062400 Sobic004G277400 Sobic004G277400 Sobic004G358900--Sobic004G277400 Sobic004G358900--Sobic001G205900 Sobic006G265600 Sobic006G265600 Sobic004G358900--Sobic006G265600 Sobic002G223800 Sobic002G223800 Sobic004G358900--Sobic002G223800 Sobic008G084100 Sobic008G084100 Sobic010G277000--Sobic008G084100 Sobic007G191600 Sobic007G191600 Sobic010G277000--Sobic007G191600 Sobic001G035400 Sobic001G035400 Sobic010G277000--Sobic001G035400 Sobic001G214900 Sobic001G214900 Sobic010G277000--Sobic001G214900 Sobic003G238500 Sobic003G238500 Sobic010G277000--Sobic003G238500 Sobic001G026600 Sobic001G026600 Sobic010G277000--Sobic001G026600 Sobic002G054000 Sobic002G054000 Sobic010G277000--Sobic002G054000 Sobic003G205400 Sobic003G205400 Sobic010G277000--Sobic003G205400 Sobic005G027300 Sobic005G027300 Sobic010G277000--Sobic005G027300 Sobic001G061200 Sobic001G061200 Sobic003G125100--Sobic001G061200 Sobic003G118400 Sobic003G118400 Sobic003G125100--Sobic003G118400 Sobic008G111700 Sobic008G111700 Sobic003G125100--Sobic008G111700 Sobic006G094600 Sobic006G094600 Sobic003G125100--Sobic006G094600 Sobic009G207200 Sobic009G207200 Sobic003G125100--Sobic009G207200 Sobic006G257001 Sobic006G257001 Sobic003G125100--Sobic006G257001 Sobic001G404200 Sobic001G404200 Sobic003G125100--Sobic001G404200 Sobic001G499000 Sobic001G499000 Sobic003G125100--Sobic001G499000 Sobic002G029300 Sobic002G029300 Sobic003G125100--Sobic002G029300 Sobic004G343600 Sobic004G343600 Sobic001G107300--Sobic004G343600 Sobic001G505000 Sobic001G505000 Sobic001G107300--Sobic001G505000 Sobic004G047500 Sobic004G047500 Sobic001G107300--Sobic004G047500 Sobic002G353500 Sobic002G353500 Sobic001G107300--Sobic002G353500 Sobic006G013900 Sobic006G013900 Sobic001G107300--Sobic006G013900 Sobic001G107300--Sobic003G109200 Sobic001G440900 Sobic001G440900 Sobic001G107300--Sobic001G440900 Sobic001G162800 Sobic001G162800 Sobic001G107300--Sobic001G162800 Sobic001G436300 Sobic001G436300 Sobic001G107300--Sobic001G436300 Sobic002G087000--Sobic001G035400 Sobic002G141700 Sobic002G141700 Sobic002G087000--Sobic002G141700 Sobic002G087000--Sobic001G443200 Sobic009G234400 Sobic009G234400 Sobic002G087000--Sobic009G234400 Sobic002G087000--Sobic001G196100 Sobic007G176200 Sobic007G176200 Sobic002G087000--Sobic007G176200 Sobic003G224300 Sobic003G224300 Sobic002G087000--Sobic003G224300 Sobic006G211800 Sobic006G211800 Sobic002G087000--Sobic006G211800 Sobic005G105500 Sobic005G105500 Sobic002G087000--Sobic005G105500 Sobic001G205900--Sobic003G005900 Sobic001G205900--Sobic003G062400 Sobic010G059700 Sobic010G059700 Sobic001G205900--Sobic010G059700 Sobic001G205900--Sobic004G358900 Sobic008G129600 Sobic008G129600 Sobic001G205900--Sobic008G129600 Sobic004G256300 Sobic004G256300 Sobic001G205900--Sobic004G256300 Sobic003G222700 Sobic003G222700 Sobic001G205900--Sobic003G222700 Sobic002G297600 Sobic002G297600 Sobic001G205900--Sobic002G297600 Sobic007G036800 Sobic007G036800 Sobic001G205900--Sobic007G036800
Octagon: transcription factors


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