Gene annotation
Transcriptome id Sobic.008G047600.1
Synonym Sb08g004030
Functional annotation expressed protein
UniProt C5YSA4
Pfam PF05633
Panther DB PTHR31509 PTHR31509:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G18740 : Protein of unknown function (DUF793)
RAP-DB (Rice) LOC_Os12g06780.1 : expressed protein
MaizeGDB (Corn) Zm00025a012916 , Zm00025a057481 , Zm00025a025780 , Zm00025a053997
Brachypodium PNT65400
Barley HORVU5Hr1G039660.2 , HORVU5Hr1G039660.1 , HORVU4Hr1G020080.1 , HORVU4Hr1G020080.3 , HORVU4Hr1G020080.2 , HORVU4Hr1G020080.4 , HORVU4Hr1G020080.5
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G335300 E2F-related protein, putative, expressed -
2 Sobic.006G128200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Kinase(PubMedID : 30367619)@protein kinase, putative, expressed -
3 Sobic.002G428600 methyltransferase domain containing protein, expressed -
4 Sobic.001G499600 thioredoxin, putative, expressed -
5 Sobic.006G230400 diacylglycerol kinase, putative, expressed K00901: dgkA, diacylglycerol kinase (ATP)
6 Sobic.006G118400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@gibberellin 20 oxidase 2, putative, expressed -
7 Sobic.008G129000 phosphatidic acid phosphatase-related, putative, expressed -
8 Sobic.001G482800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
9 Sobic.008G058200 pectate lyase family protein, expressed K01728: pectate lyase
10 Sobic.001G408400 phosphatase, putative, expressed K07252: dolichyldiphosphatase
11 Sobic.010G253400 AIG2-like family domain containing protein, expressed -
12 Sobic.004G186300 protein phosphotase protein, putative, expressed -
13 Sobic.009G187600 methyltransferase domain containing protein, expressed -
14 Sobic.004G143900 indole-3-glycerol phosphate synthase, chloroplast precursor, putative, expressed K01609: indole-3-glycerol phosphate synthase
15 Sobic.009G050000 Ser/Thr protein phosphatase family protein, putative, expressed K06269: serine/threonine-protein phosphatase PP1 catalytic subunit
16 Sobic.009G077100 expressed protein -
17 Sobic.004G247700 expressed protein -
18 Sobic.009G218000 VIP1 protein, putative, expressed -
19 Sobic.005G044300 exo70 exocyst complex subunit, putative, expressed K07195: EXOC7, exocyst complex component 7
20 Sobic.001G031800 ribosomal protein L30 containing protein, expressed K02907: RP-L30, MRPL30, large subunit ribosomal protein L30


Gene co-expression network
sample Sobic008G047600 Sobic008G047600 Sobic003G335300 Sobic003G335300 Sobic008G047600--Sobic003G335300 Sobic006G128200 Sobic006G128200 Sobic008G047600--Sobic006G128200 Sobic002G428600 Sobic002G428600 Sobic008G047600--Sobic002G428600 Sobic001G499600 Sobic001G499600 Sobic008G047600--Sobic001G499600 Sobic006G230400 Sobic006G230400 Sobic008G047600--Sobic006G230400 Sobic006G118400 Sobic006G118400 Sobic008G047600--Sobic006G118400 Sobic008G129000 Sobic008G129000 Sobic008G047600--Sobic008G129000 Sobic001G482800 Sobic001G482800 Sobic008G047600--Sobic001G482800 Sobic008G058200 Sobic008G058200 Sobic008G047600--Sobic008G058200 Sobic001G365700 Sobic001G365700 Sobic003G335300--Sobic001G365700 Sobic003G335300--Sobic001G482800 Sobic004G173700 Sobic004G173700 Sobic003G335300--Sobic004G173700 Sobic004G232500 Sobic004G232500 Sobic003G335300--Sobic004G232500 Sobic003G284100 Sobic003G284100 Sobic003G335300--Sobic003G284100 Sobic003G137600 Sobic003G137600 Sobic003G335300--Sobic003G137600 Sobic003G335300--Sobic006G118400 Sobic004G247700 Sobic004G247700 Sobic003G335300--Sobic004G247700 Sobic002G246800 Sobic002G246800 Sobic003G335300--Sobic002G246800 Sobic006G128200--Sobic003G335300 Sobic003G013700 Sobic003G013700 Sobic006G128200--Sobic003G013700 Sobic002G420600 Sobic002G420600 Sobic006G128200--Sobic002G420600 Sobic001G073700 Sobic001G073700 Sobic006G128200--Sobic001G073700 Sobic001G192700 Sobic001G192700 Sobic006G128200--Sobic001G192700 Sobic006G050100 Sobic006G050100 Sobic006G128200--Sobic006G050100 Sobic010G253400 Sobic010G253400 Sobic006G128200--Sobic010G253400 Sobic003G040700 Sobic003G040700 Sobic006G128200--Sobic003G040700 Sobic010G028900 Sobic010G028900 Sobic006G128200--Sobic010G028900 Sobic010G248000 Sobic010G248000 Sobic002G428600--Sobic010G248000 Sobic009G050000 Sobic009G050000 Sobic002G428600--Sobic009G050000 Sobic010G178800 Sobic010G178800 Sobic002G428600--Sobic010G178800 Sobic002G309500 Sobic002G309500 Sobic002G428600--Sobic002G309500 Sobic001G110300 Sobic001G110300 Sobic002G428600--Sobic001G110300 Sobic001G451901 Sobic001G451901 Sobic002G428600--Sobic001G451901 Sobic002G428600--Sobic008G047600 Sobic004G106700 Sobic004G106700 Sobic002G428600--Sobic004G106700 Sobic004G150200 Sobic004G150200 Sobic002G428600--Sobic004G150200 Sobic001G499600--Sobic008G129000 Sobic005G044300 Sobic005G044300 Sobic001G499600--Sobic005G044300 Sobic001G284400 Sobic001G284400 Sobic001G499600--Sobic001G284400 Sobic001G499600--Sobic006G230400 Sobic004G186300 Sobic004G186300 Sobic001G499600--Sobic004G186300 Sobic004G353500 Sobic004G353500 Sobic001G499600--Sobic004G353500 Sobic006G188400 Sobic006G188400 Sobic001G499600--Sobic006G188400 Sobic001G499600--Sobic008G047600 Sobic010G201388 Sobic010G201388 Sobic001G499600--Sobic010G201388 Sobic003G380300 Sobic003G380300 Sobic006G230400--Sobic003G380300 Sobic006G230400--Sobic006G188400 Sobic001G408400 Sobic001G408400 Sobic006G230400--Sobic001G408400 Sobic006G230400--Sobic003G335300 Sobic006G230400--Sobic001G482800 Sobic007G138100 Sobic007G138100 Sobic006G230400--Sobic007G138100 Sobic006G230400--Sobic008G129000 Sobic006G230400--Sobic001G365700 Sobic006G230400--Sobic005G044300 Sobic003G273000 Sobic003G273000 Sobic006G118400--Sobic003G273000 Sobic006G118400--Sobic004G232500 Sobic006G118400--Sobic003G335300 Sobic006G118400--Sobic001G482800 Sobic004G159400 Sobic004G159400 Sobic006G118400--Sobic004G159400 Sobic006G118400--Sobic001G365700 Sobic010G216400 Sobic010G216400 Sobic006G118400--Sobic010G216400 Sobic010G031000 Sobic010G031000 Sobic006G118400--Sobic010G031000 Sobic010G262300 Sobic010G262300 Sobic006G118400--Sobic010G262300 Sobic001G308700 Sobic001G308700 Sobic008G129000--Sobic001G308700 Sobic008G129000--Sobic001G284400 Sobic001G513300 Sobic001G513300 Sobic008G129000--Sobic001G513300 Sobic004G278000 Sobic004G278000 Sobic008G129000--Sobic004G278000 Sobic002G183400 Sobic002G183400 Sobic008G129000--Sobic002G183400 Sobic008G129000--Sobic006G230400 Sobic004G268200 Sobic004G268200 Sobic008G129000--Sobic004G268200 Sobic004G228700 Sobic004G228700 Sobic008G129000--Sobic004G228700 Sobic008G129000--Sobic003G273000 Sobic001G482800--Sobic004G247700 Sobic001G482800--Sobic003G335300 Sobic001G482800--Sobic001G365700 Sobic001G482800--Sobic004G232500 Sobic008G188400 Sobic008G188400 Sobic001G482800--Sobic008G188400 Sobic001G482800--Sobic003G137600 Sobic001G482800--Sobic006G118400 Sobic004G247500 Sobic004G247500 Sobic001G482800--Sobic004G247500 Sobic001G482800--Sobic003G284100 Sobic001G023600 Sobic001G023600 Sobic008G058200--Sobic001G023600 Sobic009G218000 Sobic009G218000 Sobic008G058200--Sobic009G218000 Sobic003G200000 Sobic003G200000 Sobic008G058200--Sobic003G200000 Sobic006G167100 Sobic006G167100 Sobic008G058200--Sobic006G167100 Sobic005G045800 Sobic005G045800 Sobic008G058200--Sobic005G045800 Sobic009G158000 Sobic009G158000 Sobic008G058200--Sobic009G158000 Sobic009G054400 Sobic009G054400 Sobic008G058200--Sobic009G054400 Sobic007G118050 Sobic007G118050 Sobic008G058200--Sobic007G118050 Sobic001G414100 Sobic001G414100 Sobic008G058200--Sobic001G414100
Octagon: transcription factors


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