Gene annotation
Transcriptome id Sobic.001G499600.1
Synonym ACHT4, Sb01g046670
Functional annotation thioredoxin, putative, expressed
UniProt C5WXT8
Pfam PF00085
Panther DB PTHR10438 PTHR10438:SF245
NCBI CDD KOG0907; Thioredoxin
KEGG Orthology -
Gene Ontology GO:0015035; protein disulfide oxidoreductase activity GO:0006662glycerol ether metabolic process


Orthologs (automatic annotation)
TAIR AT1G08570 : atypical CYS HIS rich thioredoxin 4
RAP-DB (Rice) LOC_Os03g21000.1 : thioredoxin, putative, expressed
MaizeGDB (Corn) Zm00025a002280
Brachypodium KQK14585 , KQK21870
Barley HORVU2Hr1G017310.1
Wheat TraesCS2B02G118100 , TraesCS2A02G100900 , TraesCS2D02G100500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G129000 phosphatidic acid phosphatase-related, putative, expressed -
2 Sobic.005G044300 exo70 exocyst complex subunit, putative, expressed K07195: EXOC7, exocyst complex component 7
3 Sobic.001G284400 jmjC domain containing protein, expressed -
4 Sobic.006G230400 diacylglycerol kinase, putative, expressed K00901: dgkA, diacylglycerol kinase (ATP)
5 Sobic.004G186300 protein phosphotase protein, putative, expressed -
6 Sobic.004G353500 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
7 Sobic.006G188400 - -
8 Sobic.008G047600 expressed protein -
9 Sobic.010G201388 - -
10 Sobic.010G075000 DNA ligase, putative, expressed -
11 Sobic.003G335300 E2F-related protein, putative, expressed -
12 Sobic.003G273000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@hydrolase, putative, expressed K14664: IAA-amino acid hydrolase
13 Sobic.006G118400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@gibberellin 20 oxidase 2, putative, expressed -
14 Sobic.010G262300 coiled-coil domain-containing protein 90A, mitochondrial precursor, putative, expressed -
15 Sobic.001G057600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@stem-specific protein TSJT1, putative, expressed -
16 Sobic.001G482800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
17 Sobic.010G178800 solute carrier family 35 member B1, putative, expressed K15275: solute carrier family 35 (UDP-galactose transporter), member B1
18 Sobic.003G253500 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
19 Sobic.001G408400 phosphatase, putative, expressed K07252: dolichyldiphosphatase
20 Sobic.006G128200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Kinase(PubMedID : 30367619)@protein kinase, putative, expressed -


Gene co-expression network
sample Sobic001G499600 Sobic001G499600 Sobic008G129000 Sobic008G129000 Sobic001G499600--Sobic008G129000 Sobic005G044300 Sobic005G044300 Sobic001G499600--Sobic005G044300 Sobic001G284400 Sobic001G284400 Sobic001G499600--Sobic001G284400 Sobic006G230400 Sobic006G230400 Sobic001G499600--Sobic006G230400 Sobic004G186300 Sobic004G186300 Sobic001G499600--Sobic004G186300 Sobic004G353500 Sobic004G353500 Sobic001G499600--Sobic004G353500 Sobic006G188400 Sobic006G188400 Sobic001G499600--Sobic006G188400 Sobic008G047600 Sobic008G047600 Sobic001G499600--Sobic008G047600 Sobic010G201388 Sobic010G201388 Sobic001G499600--Sobic010G201388 Sobic001G308700 Sobic001G308700 Sobic008G129000--Sobic001G308700 Sobic008G129000--Sobic001G284400 Sobic001G513300 Sobic001G513300 Sobic008G129000--Sobic001G513300 Sobic004G278000 Sobic004G278000 Sobic008G129000--Sobic004G278000 Sobic002G183400 Sobic002G183400 Sobic008G129000--Sobic002G183400 Sobic008G129000--Sobic006G230400 Sobic004G268200 Sobic004G268200 Sobic008G129000--Sobic004G268200 Sobic004G228700 Sobic004G228700 Sobic008G129000--Sobic004G228700 Sobic003G273000 Sobic003G273000 Sobic008G129000--Sobic003G273000 Sobic008G018300 Sobic008G018300 Sobic005G044300--Sobic008G018300 Sobic004G159000 Sobic004G159000 Sobic005G044300--Sobic004G159000 Sobic001G387200 Sobic001G387200 Sobic005G044300--Sobic001G387200 Sobic004G039400 Sobic004G039400 Sobic005G044300--Sobic004G039400 Sobic002G420600 Sobic002G420600 Sobic005G044300--Sobic002G420600 Sobic005G044300--Sobic004G353500 Sobic003G335300 Sobic003G335300 Sobic005G044300--Sobic003G335300 Sobic003G016300 Sobic003G016300 Sobic005G044300--Sobic003G016300 Sobic001G038000 Sobic001G038000 Sobic005G044300--Sobic001G038000 Sobic002G373600 Sobic002G373600 Sobic001G284400--Sobic002G373600 Sobic001G284425 Sobic001G284425 Sobic001G284400--Sobic001G284425 Sobic001G284400--Sobic008G129000 Sobic010G076700 Sobic010G076700 Sobic001G284400--Sobic010G076700 Sobic003G385000 Sobic003G385000 Sobic001G284400--Sobic003G385000 Sobic010G252900 Sobic010G252900 Sobic001G284400--Sobic010G252900 Sobic001G284400--Sobic005G044300 Sobic006G263100 Sobic006G263100 Sobic001G284400--Sobic006G263100 Sobic001G409900 Sobic001G409900 Sobic001G284400--Sobic001G409900 Sobic003G380300 Sobic003G380300 Sobic006G230400--Sobic003G380300 Sobic006G230400--Sobic006G188400 Sobic001G408400 Sobic001G408400 Sobic006G230400--Sobic001G408400 Sobic006G230400--Sobic003G335300 Sobic001G482800 Sobic001G482800 Sobic006G230400--Sobic001G482800 Sobic007G138100 Sobic007G138100 Sobic006G230400--Sobic007G138100 Sobic006G230400--Sobic008G129000 Sobic001G365700 Sobic001G365700 Sobic006G230400--Sobic001G365700 Sobic006G230400--Sobic005G044300 Sobic006G222500 Sobic006G222500 Sobic004G186300--Sobic006G222500 Sobic003G270100 Sobic003G270100 Sobic004G186300--Sobic003G270100 Sobic006G219900 Sobic006G219900 Sobic004G186300--Sobic006G219900 Sobic003G308300 Sobic003G308300 Sobic004G186300--Sobic003G308300 Sobic007G148400 Sobic007G148400 Sobic004G186300--Sobic007G148400 Sobic010G253400 Sobic010G253400 Sobic004G186300--Sobic010G253400 Sobic007G218600 Sobic007G218600 Sobic004G186300--Sobic007G218600 Sobic004G186300--Sobic001G408400 Sobic003G346500 Sobic003G346500 Sobic004G186300--Sobic003G346500 Sobic003G294900 Sobic003G294900 Sobic004G353500--Sobic003G294900 Sobic008G118300 Sobic008G118300 Sobic004G353500--Sobic008G118300 Sobic004G353500--Sobic005G044300 Sobic007G012900 Sobic007G012900 Sobic004G353500--Sobic007G012900 Sobic004G160800 Sobic004G160800 Sobic004G353500--Sobic004G160800 Sobic001G286100 Sobic001G286100 Sobic004G353500--Sobic001G286100 Sobic002G037600 Sobic002G037600 Sobic004G353500--Sobic002G037600 Sobic001G203800 Sobic001G203800 Sobic004G353500--Sobic001G203800 Sobic002G186500 Sobic002G186500 Sobic004G353500--Sobic002G186500 Sobic006G188400--Sobic006G230400 Sobic006G188400--Sobic003G380300 Sobic006G188400--Sobic001G408400 Sobic010G105000 Sobic010G105000 Sobic006G188400--Sobic010G105000 Sobic006G188400--Sobic007G138100 Sobic002G228900 Sobic002G228900 Sobic006G188400--Sobic002G228900 Sobic006G188400--Sobic003G335300 Sobic005G145201 Sobic005G145201 Sobic006G188400--Sobic005G145201 Sobic001G536100 Sobic001G536100 Sobic006G188400--Sobic001G536100 Sobic008G047600--Sobic003G335300 Sobic006G128200 Sobic006G128200 Sobic008G047600--Sobic006G128200 Sobic002G428600 Sobic002G428600 Sobic008G047600--Sobic002G428600 Sobic008G047600--Sobic001G499600 Sobic008G047600--Sobic006G230400 Sobic006G118400 Sobic006G118400 Sobic008G047600--Sobic006G118400 Sobic008G047600--Sobic008G129000 Sobic008G047600--Sobic001G482800 Sobic008G058200 Sobic008G058200 Sobic008G047600--Sobic008G058200 Sobic009G182200 Sobic009G182200 Sobic010G201388--Sobic009G182200 Sobic004G123000 Sobic004G123000 Sobic010G201388--Sobic004G123000 Sobic001G173300 Sobic001G173300 Sobic010G201388--Sobic001G173300 Sobic003G253500 Sobic003G253500 Sobic010G201388--Sobic003G253500 Sobic004G259600 Sobic004G259600 Sobic010G201388--Sobic004G259600 Sobic003G227200 Sobic003G227200 Sobic010G201388--Sobic003G227200 Sobic004G247200 Sobic004G247200 Sobic010G201388--Sobic004G247200 Sobic010G201388--Sobic001G284400 Sobic002G113500 Sobic002G113500 Sobic010G201388--Sobic002G113500
Octagon: transcription factors


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